Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0011579

Physical Location & Seq

Genomic Coordinates Forward (+)

17785919 .. 17794796

Gene Structure 8878 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0202100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1725 bp

ATGGATACCACTAAATGGTTCCTTCTACTCGCTTGTTGCTGTGTTTTTGTGATACATAACATCAATGGAGTCGAAGCTTCACACAAGGTATACCCAGAGTTTCAATCTCTTCGTGCTGTGAAGATCAAGCAAGTCCACAGAACTGGTTTTCACTTTCAACCTCCCAGCCACTGGATTAATGACCCAAATGGACCTATGTATTTTGGGGGTCTCTACCACTTTTTCTATCAGTACAATCCCAAAGGAGCTGTTTGGGGCAACATTGTATGGGCCCATTCAGTCTCTAAGGATCTGATCAATTGGCAAGCCCTTGAACCCGCCATATACCCATCCAAGCCCTTTGACATAAACGGGTGCTGGTCCGGATCCGCCACCCTTCTCCCGGGCAACAAGCCTATCATCCTCTACACCGGACTTGACCCGGAAAAGCGCCAGGTCCAAAACTACGCCGTGCCCGCAAATGTGTCCGACCCATATCTACGCAAATGGGTTAAGCCCGACAACAACCCGCTAGTGGTTCCGGATGCAAGTATGAATGCATCCCAGTTCCGTGACCCGACAACCGCTTGGTGGAGCAATGGGCACTGGAAGATGTTGGTGGGTGGCAAGAGAAAGCATAGAGGGATGGCTCATTTGTATAGGAGCAAGGATTTTGTTTATTGGGTCAAGGCCCAGCACCCGCTTCACTCTGCCCCGAAAACCGGTATGTGGGAATGCCCGGATTTTTACCCGGTTTCATTGAAAGGCAAGGTAGGGTTGGACACGTCAAACAATGGGGATGTGAAGCATGTTTTGAAAGTGAGCCTTGATGAGACTAGGTATGACTACTACACTGTTGGAAAATACTTTCCTAAACAAGATAGGTATGTTCCTGATAAGGAATTGGTGGATGGTTGGGCTGGATTGAGATATGATTATGGGAACTTCTATGCTTCCAAAACTTTCTTTGATCCTGCTAAGAATAGAAGAATTTTGTGGGGCTGGGCTAATGAGTCTGATACTCCTAACAATGATGTTGAAAAGGGATGGGCTGGAGTTCAGGCAATCCCAAGGACTGTGTGGCTGAGTACTGATGGGAAACAATTGTTACAATGGCCTGTTGAAGAATTGGAAACTTTAAGGGGACAAAAGGTCCAGATGAAGAATCAAAATCTCAAAGTGGGAGATCATGTTGAAGTTAAAGGAATACATGCTGCTCAGGCCGATGTTGAAGTTATATTCTCTTTCAAGAGCTTGGACAAAGCAGAGAAGTTTGACCCTATATGGTCAAACCTTGATGCCCAAGCAATATGTGGGCTAACGGGTTCAAAAATTGGAGGTGGCATTGGCCCATTTGGGCTATTGACTTTAGCTTCACAAAACCTAGAGGAATTCACTCCTGTCTTCTTTAGGGTGTTCAAAACTCAAGGCAATAAGCATAAGGTTCTCCTGTGCTCTGATGCAAGAAGTTCCTCTTTGCAGGATAATCTGTACAAACCATCATTTGCTGGTTTTGTAGATGTAGATTTATCTGATAAGAAGCTCTCCCTCAGGAGTTTGATTGATCATTCTGTTGTTGAGAGTTTTGGAGCTGGAGGAAAAACATGCATAACTTCTAGGGTTTACCCCTCTCTAGCTGTTGACAATAAAGCTCACTTGTATGTGTTCAACAATGGGACTGAGGCTGTCACTATTGAGAGTCTCGATGCGTGGACTATGAATGCTCCTAAGTTGATGAACCAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004791 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006109 GO:0008047 GO:0008150 GO:0008152 GO:0009056 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009636 GO:0009889 GO:0009987 GO:0010380 GO:0010556 GO:0010581 GO:0010675 GO:0010962 GO:0015036 GO:0016209 GO:0016491 GO:0016651 GO:0016667 GO:0016668 GO:0016671 GO:0016999 GO:0017001 GO:0017144 GO:0019222 GO:0019725 GO:0030234 GO:0031323 GO:0031326 GO:0032881 GO:0032885 GO:0042221 GO:0042592 GO:0042737 GO:0042743 GO:0042744 GO:0042802 GO:0043085 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043255 GO:0044093 GO:0044237 GO:0044248 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0045454 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051171 GO:0051186 GO:0051187 GO:0051193 GO:0051716 GO:0055114 GO:0060255 GO:0065007 GO:0065008 GO:0065009 GO:0070887 GO:0072593 GO:0080090 GO:0090056 GO:0097237 GO:0098754 GO:0098772 GO:0098869 GO:1901401 GO:1901463 GO:1990748 GO:2000112 GO:2000904

KEGG Pathways

Metabolic & Signaling

ko00450 map00450

Pfam Domains

Protein Families

Pyr_redox_2 Thioredoxin

Protein Analysis

574

Amino Acids

64.82

Weight (kDa)

8.79

Isoelectric Point (pI)

30.32

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydro_32N	PF00251	51 - 366	1.9e-105	Glycosyl hydrolases family 32 N-terminal domain
Glyco_hydro_32C	PF08244	369 - 564	8.7e-24	Glycosyl hydrolases family 32 C terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011579)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g24260
malus_domestica	MD00G1191900.v1.1 MD12G1076400.v1.1 MD12G1076700.v1.1 MD14G1074800.v1.1
prunus_persica	Prupe.7G056200_v2.0.a1 Prupe.7G056200_v2.0.a1 Prupe.7G056400_v2.0.a1 Prupe.7G056400_v2.0.a1
rosa_chinensis	RchiOBHm_Chr3g0482931
rosa_laevigata	RLG00000023316
rosa_multiflora	Rmu_ssc0000175.1_g000016
rosa_roxburghii	Rroxscaffold_6G00398830
rosa_rugosa	Rorug03G0202100 Rorug03G0202100
rosa_samantha	Rh3AG251200 Rh3BG287700 Rh3CG285000 Rh3DG280700
rosa_wichuraiana	Rw3G022620

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	2 cut(s)	15, 171
AccI	GTMKAC	1 cut(s)	90
AccIII	TCCGGA	2 cut(s)	362, 520
AciI	CCGC	6 cut(s)	318, 369, 456, 509, 564, 680
AclWI	GGATC	4 cut(s)	297, 360, 373, 944
AcsI	RAATTY	2 cut(s)	969, 1370
AfaI	GTAC	3 cut(s)	233, 1069, 1472
AfiI	CCNNNNNNNGG	7 cut(s)	15, 171, 382, 514, 570, 701, 708
AflIII	ACRYGT	1 cut(s)	762
AgeI	ACCGGT	1 cut(s)	701
AhdI	GACNNNNNGTC	1 cut(s)	1130
AjiI	CACGTC	1 cut(s)	765
AjnI	CCWGG	1 cut(s)	432
AluBI	AGCT	8 cut(s)	77, 248, 1233, 1352, 1522, 1571, 1616, 1631
AluI	AGCT	8 cut(s)	77, 248, 1233, 1352, 1522, 1571, 1616, 1631
Alw21I	GWGCWC	1 cut(s)	1436
Alw26I	GTCTC	4 cut(s)	215, 286, 806, 1685
AlwI	GGATC	4 cut(s)	297, 360, 373, 944
AlwNI	CAGNNNCTG	1 cut(s)	171
Ama87I	CYCGRG	1 cut(s)	382
Aor13HI	TCCGGA	2 cut(s)	362, 520
AoxI	GGCC	5 cut(s)	270, 669, 1094, 1200, 1327
ApaI	GGGCCC	1 cut(s)	274
ApeKI	GCWGC	1 cut(s)	1193
ApoI	RAATTY	2 cut(s)	969, 1370
AseI	ATTAAT	1 cut(s)	177
AsiGI	ACCGGT	1 cut(s)	701
AspLEI	GCGC	1 cut(s)	432
AspS9I	GGNCC	8 cut(s)	191, 270, 271, 360, 436, 670, 1132, 1328
AsuC2I	CCSGG	5 cut(s)	383, 384, 422, 719, 731
AvaI	CYCGRG	1 cut(s)	382
AvaII	GGWCC	4 cut(s)	191, 360, 436, 1132
AxyI	CCTNAGG	1 cut(s)	1529
BaeGI	GKGCMC	3 cut(s)	274, 456, 585
BamHI	GGATCC	1 cut(s)	365
BanII	GRGCYC	1 cut(s)	274
BbsI	GAAGAC	1 cut(s)	1375
Bbv12I	GWGCWC	1 cut(s)	1436
BbvI	GCAGC	1 cut(s)	1180
BccI	CCATC	6 cut(s)	337, 619, 884, 1020, 1067, 1486
BceAI	ACGGC	1 cut(s)	434
BciT130I	CCWGG	1 cut(s)	434
BclI	TGATCA	2 cut(s)	294, 1543
BcnI	CCSGG	5 cut(s)	383, 384, 422, 719, 731
BcoDI	GTCTC	4 cut(s)	215, 286, 806, 1685
BfaI	CTAG	5 cut(s)	512, 816, 1364, 1596, 1613
BfoI	RGCGCY	1 cut(s)	433
BisI	GCNGC	1 cut(s)	1194
BlsI	GCNGC	1 cut(s)	1195
BmcAI	AGTACT	1 cut(s)	1069
Bme1390I	CCNGG	6 cut(s)	383, 384, 422, 434, 719, 731
Bme18I	GGWCC	4 cut(s)	191, 360, 436, 1132
BmeRI	GACNNNNNGTC	1 cut(s)	1130
BmeT110I	CYCGRG	1 cut(s)	382
BmgBI	CACGTC	1 cut(s)	765
BmgT120I	GGNCC	8 cut(s)	191, 270, 271, 360, 436, 670, 1132, 1328
BmiI	GGNNCC	4 cut(s)	20, 272, 367, 519
BmrFI	CCNGG	6 cut(s)	383, 384, 422, 434, 719, 731
BmrI	ACTGGG	1 cut(s)	538
BmsI	GCATC	5 cut(s)	514, 548, 1267, 1429, 1675
BmuI	ACTGGG	1 cut(s)	538
BpiI	GAAGAC	1 cut(s)	1375
BpmI	CTGGAG	2 cut(s)	1053, 1593
Bpu10I	CCTNAGC	1 cut(s)	1197
BpuEI	CTTGAG	1 cut(s)	1389
BpuMI	CCSGG	5 cut(s)	383, 384, 422, 719, 731
BsaI	GGTCTC	1 cut(s)	215
BsaJI	CCNNGG	2 cut(s)	382, 1049
BsaWI	WCCGGW	4 cut(s)	362, 410, 520, 701
BsaXI	ACNNNNNCTCC	2 cut(s)	1155, 1185
Bsc4I	CCNNNNNNNGG	7 cut(s)	15, 171, 382, 514, 570, 701, 708
Bse118I	RCCGGY	1 cut(s)	701
Bse1I	ACTGG	4 cut(s)	148, 176, 544, 590
Bse21I	CCTNAGG	1 cut(s)	1529
Bse3DI	GCAATG	1 cut(s)	583
BseAI	TCCGGA	2 cut(s)	362, 520
BseBI	CCWGG	1 cut(s)	434
BseDI	CCNNGG	2 cut(s)	382, 1049
BseGI	GGATG	8 cut(s)	329, 399, 529, 539, 630, 784, 895, 1031
BseLI	CCNNNNNNNGG	7 cut(s)	15, 171, 382, 514, 570, 701, 708
BseMI	GCAATG	1 cut(s)	583
BseMII	CTCAG	4 cut(s)	1055, 1211, 1543, 1650
BseNI	ACTGG	4 cut(s)	148, 176, 544, 590
BseSI	GKGCMC	3 cut(s)	274, 456, 585
BseXI	GCAGC	1 cut(s)	1180
BseYI	CCCAGC	3 cut(s)	164, 672, 981
BshFI	GGCC	5 cut(s)	272, 671, 1096, 1202, 1329
BshTI	ACCGGT	1 cut(s)	701
BsiHKAI	GWGCWC	1 cut(s)	1436
BsiHKCI	CYCGRG	1 cut(s)	382
BsiSI	CCGG	8 cut(s)	363, 383, 411, 422, 521, 702, 719, 731
BslFI	GGGAC	2 cut(s)	1137, 1669
BslI	CCNNNNNNNGG	7 cut(s)	15, 171, 382, 514, 570, 701, 708
BsmAI	GTCTC	4 cut(s)	215, 286, 806, 1685
BsmFI	GGGAC	2 cut(s)	1137, 1669
BsmI	GAATGC	3 cut(s)	541, 719, 1705
BsnI	GGCC	5 cut(s)	272, 671, 1096, 1202, 1329
Bso31I	GGTCTC	1 cut(s)	215
BsoBI	CYCGRG	1 cut(s)	382
Bsp120I	GGGCCC	1 cut(s)	270
Bsp1286I	GDGCHC	4 cut(s)	274, 456, 585, 1436
Bsp13I	TCCGGA	2 cut(s)	362, 520
Bsp1407I	TGTACA	1 cut(s)	1470
Bsp143I	GATC	7 cut(s)	123, 289, 294, 365, 949, 1165, 1543
BspACI	CCGC	6 cut(s)	318, 369, 456, 509, 564, 680
BspANI	GGCC	5 cut(s)	272, 671, 1096, 1202, 1329
BspCNI	CTCAG	4 cut(s)	1056, 1210, 1542, 1651
BspEI	TCCGGA	2 cut(s)	362, 520
BspLI	GGNNCC	4 cut(s)	20, 272, 367, 519
BspPI	GGATC	4 cut(s)	297, 360, 373, 944
BspTNI	GGTCTC	1 cut(s)	215
BsrDI	GCAATG	1 cut(s)	583
BsrFI	RCCGGY	1 cut(s)	701
BsrGI	TGTACA	1 cut(s)	1470
BsrI	ACTGG	4 cut(s)	148, 176, 544, 590
BssAI	RCCGGY	1 cut(s)	701
BssECI	CCNNGG	2 cut(s)	382, 1049
BssMI	GATC	7 cut(s)	123, 289, 294, 365, 949, 1165, 1543
BssNAI	GTATAC	1 cut(s)	91
BssT1I	CCWWGG	1 cut(s)	1049
Bst1107I	GTATAC	1 cut(s)	91
Bst2UI	CCWGG	1 cut(s)	434
Bst4CI	ACNGT	2 cut(s)	835, 1057
Bst6I	CTCTTC	1 cut(s)	114
BstAUI	TGTACA	1 cut(s)	1470
BstC8I	GCNNGC	2 cut(s)	306, 456
BstDEI	CTNAG	7 cut(s)	285, 957, 1064, 1197, 1529, 1659, 1707
BstF5I	GGATG	8 cut(s)	329, 399, 529, 539, 630, 784, 895, 1031
BstH2I	RGCGCY	1 cut(s)	433
BstHHI	GCGC	1 cut(s)	432
BstKTI	GATC	7 cut(s)	126, 292, 297, 368, 952, 1168, 1546
BstMAI	GTCTC	4 cut(s)	215, 286, 806, 1685
BstMBI	GATC	7 cut(s)	123, 289, 294, 365, 949, 1165, 1543
BstMWI	GCNNNNNNNGC	2 cut(s)	455, 1199
BstNI	CCWGG	1 cut(s)	434
BstNSI	RCATGY	3 cut(s)	791, 1193, 1587
BstSCI	CCNGG	6 cut(s)	381, 382, 420, 432, 717, 729
BstSLI	GKGCMC	3 cut(s)	274, 456, 585
BstV1I	GCAGC	1 cut(s)	1180
BstV2I	GAAGAC	1 cut(s)	1375
BstX2I	RGATCY	2 cut(s)	289, 365
BstXI	CCANNNNNNTGG	1 cut(s)	143
BstYI	RGATCY	2 cut(s)	289, 365
BstZ17I	GTATAC	1 cut(s)	91
Bsu36I	CCTNAGG	1 cut(s)	1529
BsuRI	GGCC	5 cut(s)	272, 671, 1096, 1202, 1329
BtrI	CACGTC	1 cut(s)	765
BtsCI	GGATG	8 cut(s)	329, 399, 529, 539, 630, 784, 895, 1031
BtsIMutI	CAGTG	3 cut(s)	169, 583, 831
Cac8I	GCNNGC	2 cut(s)	306, 456
CaiI	CAGNNNCTG	1 cut(s)	171
CfoI	GCGC	1 cut(s)	432
Cfr10I	RCCGGY	1 cut(s)	701
Cfr13I	GGNCC	8 cut(s)	191, 270, 271, 360, 436, 670, 1132, 1328
Cfr9I	CCCGGG	1 cut(s)	382
Csp6I	GTAC	3 cut(s)	232, 1068, 1471
CspAI	ACCGGT	1 cut(s)	701
CviAII	CATG	4 cut(s)	788, 1169, 1190, 1584
CviQI	GTAC	3 cut(s)	232, 1068, 1471
DdeI	CTNAG	7 cut(s)	285, 957, 1064, 1197, 1529, 1659, 1707
DpnI	GATC	7 cut(s)	125, 291, 296, 367, 951, 1167, 1545
DpnII	GATC	7 cut(s)	123, 289, 294, 365, 949, 1165, 1543
DriI	GACNNNNNGTC	1 cut(s)	1130
Eam1104I	CTCTTC	1 cut(s)	114
Eam1105I	GACNNNNNGTC	1 cut(s)	1130
EarI	CTCTTC	1 cut(s)	114
EciI	GGCGGA	1 cut(s)	358
Eco130I	CCWWGG	1 cut(s)	1049
Eco24I	GRGCYC	1 cut(s)	274
Eco31I	GGTCTC	1 cut(s)	215
Eco47I	GGWCC	4 cut(s)	191, 360, 436, 1132
Eco81I	CCTNAGG	1 cut(s)	1529
Eco88I	CYCGRG	1 cut(s)	382
EcoRI	GAATTC	1 cut(s)	1370
EcoRII	CCWGG	1 cut(s)	432
EcoT14I	CCWWGG	1 cut(s)	1049
EcoT22I	ATGCAT	2 cut(s)	541, 1589
EcoT38I	GRGCYC	1 cut(s)	274
ErhI	CCWWGG	1 cut(s)	1049
FaeI	CATG	4 cut(s)	791, 1172, 1193, 1587
FalI	AAGNNNNNCTT	4 cut(s)	789, 821, 1438, 1470
FaqI	GGGAC	2 cut(s)	1137, 1669
FatI	CATG	4 cut(s)	787, 1168, 1189, 1583
FauI	CCCGC	4 cut(s)	325, 463, 516, 687
FbaI	TGATCA	2 cut(s)	294, 1543
FblI	GTMKAC	1 cut(s)	90
Fnu4HI	GCNGC	1 cut(s)	1194
FokI	GGATG	8 cut(s)	316, 386, 526, 536, 637, 791, 902, 1038
FriOI	GRGCYC	1 cut(s)	274
Fsp4HI	GCNGC	1 cut(s)	1194
FspBI	CTAG	5 cut(s)	512, 816, 1364, 1596, 1613
GlaI	GCGC	1 cut(s)	431
GluI	GCNGC	1 cut(s)	1194
GsaI	CCCAGC	3 cut(s)	168, 676, 985
GsuI	CTGGAG	2 cut(s)	1053, 1593
HaeII	RGCGCY	1 cut(s)	433
HaeIII	GGCC	5 cut(s)	272, 671, 1096, 1202, 1329
HapII	CCGG	8 cut(s)	363, 383, 411, 422, 521, 702, 719, 731
HhaI	GCGC	1 cut(s)	432
Hin1II	CATG	4 cut(s)	791, 1172, 1193, 1587
Hin6I	GCGC	1 cut(s)	430
HinP1I	GCGC	1 cut(s)	430
HincII	GTYRAC	1 cut(s)	1621
HindII	GTYRAC	1 cut(s)	1621
HindIII	AAGCTT	1 cut(s)	75
HinfI	GANTC	4 cut(s)	69, 992, 1144, 1678
HpaII	CCGG	8 cut(s)	363, 383, 411, 422, 521, 702, 719, 731
Hpy166II	GTNNAC	5 cut(s)	91, 136, 1603, 1621, 1692
Hpy188I	TCNGA	5 cut(s)	294, 469, 997, 1438, 1513
Hpy188III	TCNNGA	7 cut(s)	363, 521, 872, 1135, 1228, 1531, 1682
Hpy8I	GTNNAC	5 cut(s)	91, 136, 1603, 1621, 1692
HpyAV	CCTTC	2 cut(s)	32, 386
HpyCH4III	ACNGT	2 cut(s)	835, 1057
HpyCH4IV	ACGT	1 cut(s)	764
HpyCH4V	TGCA	5 cut(s)	527, 539, 1442, 1459, 1587
HpyF10VI	GCNNNNNNNGC	2 cut(s)	455, 1199
HpyF3I	CTNAG	7 cut(s)	285, 957, 1064, 1197, 1529, 1659, 1707
HpySE526I	ACGT	1 cut(s)	764
Hsp92II	CATG	4 cut(s)	791, 1172, 1193, 1587
HspAI	GCGC	1 cut(s)	430
Kpn2I	TCCGGA	2 cut(s)	362, 520
Ksp22I	TGATCA	2 cut(s)	294, 1543
Kzo9I	GATC	7 cut(s)	123, 289, 294, 365, 949, 1165, 1543
LmnI	GCTCC	5 cut(s)	245, 573, 642, 1568, 1708
Lsp1109I	GCAGC	1 cut(s)	1180
LweI	GCATC	5 cut(s)	514, 548, 1267, 1429, 1675
MaeI	CTAG	5 cut(s)	512, 816, 1364, 1596, 1613
MaeII	ACGT	1 cut(s)	764
MaeIII	GTNAC	3 cut(s)	551, 1086, 1666
MalI	GATC	7 cut(s)	125, 291, 296, 367, 951, 1167, 1545
MboI	GATC	7 cut(s)	123, 289, 294, 365, 949, 1165, 1543
MboII	GAAGA	7 cut(s)	101, 133, 601, 978, 1115, 1153, 1375
MfeI	CAATTG	2 cut(s)	298, 1082
MflI	RGATCY	2 cut(s)	289, 365
MhlI	GDGCHC	4 cut(s)	274, 456, 585, 1436
MluCI	AATT	7 cut(s)	298, 881, 969, 1082, 1106, 1311, 1370
MlyI	GAGTC	3 cut(s)	78, 1001, 1687
MmeI	TCCRAC	3 cut(s)	492, 738, 817
Mph1103I	ATGCAT	2 cut(s)	541, 1589
MroI	TCCGGA	2 cut(s)	362, 520
MseI	TTAA	4 cut(s)	177, 492, 1118, 1179
MslI	CAYNNNNRTG	1 cut(s)	1638
MspI	CCGG	8 cut(s)	363, 383, 411, 422, 521, 702, 719, 731
MspR9I	CCNGG	6 cut(s)	383, 384, 422, 434, 719, 731
MunI	CAATTG	2 cut(s)	298, 1082
Mva1269I	GAATGC	3 cut(s)	541, 719, 1705
MvaI	CCWGG	1 cut(s)	434
MwoI	GCNNNNNNNGC	2 cut(s)	455, 1199
NciI	CCSGG	5 cut(s)	383, 384, 422, 719, 731
NdeII	GATC	7 cut(s)	123, 289, 294, 365, 949, 1165, 1543
NlaIII	CATG	4 cut(s)	791, 1172, 1193, 1587
NlaIV	GGNNCC	4 cut(s)	20, 272, 367, 519
NmuCI	GTSAC	2 cut(s)	551, 1666
NsiI	ATGCAT	2 cut(s)	541, 1589
NspI	RCATGY	3 cut(s)	791, 1193, 1587
PctI	GAATGC	3 cut(s)	541, 719, 1705
PfeI	GAWTC	1 cut(s)	1144
PflMI	CCANNNNNTGG	2 cut(s)	15, 171
PinAI	ACCGGT	1 cut(s)	701
PkrI	GCNGC	1 cut(s)	1195
PleI	GAGTC	3 cut(s)	77, 1000, 1686
PpsI	GAGTC	3 cut(s)	77, 1000, 1686
PshBI	ATTAAT	1 cut(s)	177
Psp6I	CCWGG	1 cut(s)	432
PspFI	CCCAGC	3 cut(s)	164, 672, 981
PspGI	CCWGG	1 cut(s)	432
PspN4I	GGNNCC	4 cut(s)	20, 272, 367, 519
PspOMI	GGGCCC	1 cut(s)	270
PspPI	GGNCC	8 cut(s)	191, 270, 271, 360, 436, 670, 1132, 1328
PstNI	CAGNNNCTG	1 cut(s)	171
PsuI	RGATCY	2 cut(s)	289, 365
RsaI	GTAC	3 cut(s)	233, 1069, 1472
RsaNI	GTAC	3 cut(s)	232, 1068, 1471
RseI	CAYNNNNRTG	1 cut(s)	1638
SaqAI	TTAA	4 cut(s)	177, 492, 1118, 1179
SatI	GCNGC	1 cut(s)	1194
Sau3AI	GATC	7 cut(s)	123, 289, 294, 365, 949, 1165, 1543
Sau96I	GGNCC	8 cut(s)	191, 270, 271, 360, 436, 670, 1132, 1328
ScaI	AGTACT	1 cut(s)	1069
SchI	GAGTC	3 cut(s)	78, 1001, 1687
ScrFI	CCNGG	6 cut(s)	383, 384, 422, 434, 719, 731
SduI	GDGCHC	4 cut(s)	274, 456, 585, 1436
SfaNI	GCATC	5 cut(s)	514, 548, 1267, 1429, 1675
SinI	GGWCC	4 cut(s)	191, 360, 436, 1132
SmaI	CCCGGG	1 cut(s)	384
SmiMI	CAYNNNNRTG	1 cut(s)	1638
SmlI	CTYRAG	1 cut(s)	1404
SmoI	CTYRAG	1 cut(s)	1404
Sse9I	AATT	7 cut(s)	298, 881, 969, 1082, 1106, 1311, 1370
SsiI	CCGC	6 cut(s)	318, 369, 456, 509, 564, 680
SspMI	CTAG	5 cut(s)	512, 816, 1364, 1596, 1613
StyD4I	CCNGG	6 cut(s)	381, 382, 420, 432, 717, 729
StyI	CCWWGG	1 cut(s)	1049
TaaI	ACNGT	2 cut(s)	835, 1057
TaiI	ACGT	1 cut(s)	767
TaqI	TCGA	2 cut(s)	72, 1683
TasI	AATT	7 cut(s)	298, 881, 969, 1082, 1106, 1311, 1370
TatI	WGTACW	3 cut(s)	231, 1067, 1470
TfiI	GAWTC	1 cut(s)	1144
Tru1I	TTAA	4 cut(s)	177, 492, 1118, 1179
Tru9I	TTAA	4 cut(s)	177, 492, 1118, 1179
TscAI	CASTG	3 cut(s)	176, 590, 838
TseFI	GTSAC	2 cut(s)	551, 1666
TseI	GCWGC	1 cut(s)	1193
Tsp45I	GTSAC	2 cut(s)	551, 1666
TspDTI	ATGAA	4 cut(s)	548, 726, 1154, 1712
TspGWI	ACGGA	1 cut(s)	539
TspMI	CCCGGG	1 cut(s)	382
TspRI	CASTG	3 cut(s)	176, 590, 838
Van91I	CCANNNNNTGG	2 cut(s)	15, 171
VpaK11BI	GGWCC	4 cut(s)	191, 360, 436, 1132
VspI	ATTAAT	1 cut(s)	177
XapI	RAATTY	2 cut(s)	969, 1370
XceI	RCATGY	3 cut(s)	791, 1193, 1587
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1056, 1289
XmaI	CCCGGG	1 cut(s)	382
XmiI	GTMKAC	1 cut(s)	90
XspI	CTAG	5 cut(s)	512, 816, 1364, 1596, 1613
ZrmI	AGTACT	1 cut(s)	1069
Zsp2I	ATGCAT	2 cut(s)	541, 1589

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.