MD14G1074800.v1.1

ABC transporter G family member

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr14
Physical Location & Seq
Forward (+)
8498628 .. 8504172
5545 bp
Loading structure...
UTR
Exon/CDS
Intron
MD14G1074800.v1.1.491

Sequence Viewer

Length: 2076 bp
ATGGCAGAGGGGTCGAGTGATTATTATGGAGATCAGCGACTGAAAGAGAATAATAATAGTGGATCAGCTGCAGGTGCAGGAAAGTACTTGGTGTGGGAAGATATAACGGTGGCGGCGGCGAACTTGAAAAATGGTGCAACGTCGAGGAAGTTGCTAAATGGGATTAGTGGCTACGCTGAACCTGACCGGATGATGGCACTCATGGGTCCTTCTGGCTCTGGAAAATCAACCTTACTTGATGCCTTGGCTGGGAGGCTTCCGGCAAATGTCAAAGTGTCTGGGGATGTAGTACTGAATGGGAACAAAAGAAGCAGAAACTGCACAGATATTTCATATGTAACTCAAGAAGATTTTTTCCTGGGATCACTTACAGTCAGAGAAACCCTAACATATTCAGCTCATATAAGGCTCCCGTGTAAAATGACTAAAGAGGAGAAGAATAAGGTGGTAGAAAACACTATCACAAAAATGGGGCTTCAAGATTGCGCTGGAAGCAACATCGGAAATTGGCATTTGAGAGGCTTAAGTAATGGAGAAAAGAGGAGACTCAGCATATGTATTGAAATACTTACACAACCTCATGTATTGTTGCTTGATGAACCCACCAGTGGCCTTGACAGCAGTTCTTCTTTCTTTGTAATATGGGCTTTGAGAAACATTGCTTGTGACGGAAGAATAGTCATTTGCTCTATTCACCAACCTAGTATCGATGTCTTCAATCTCTTCAATGATCTGCTCCTCTTAGCAGGAGGTGAAACTGTTTATTTTGGAGAAGCAAAGATGGCCATAAAGTTCTTTACTGATGCCGGATTTCCTTGTCCAACACAAAAAAATCCTCCAGACCACTTCCTTCGATGTATTAGTTCAGACTTTGACAAAGTTCTAGCAGCTCTTATGCTATCTCAAAGAATCAATTGTGCATCTACAGACTCCTTAATTTCCCAAAAGAACTTGACAACAGATGAGATCAAAGGAAAGCTAATCAATGCGTACAAGTCGTCTGCATTTTCAACAGACGCAAGGAAAAGGATCCGAGAAATCTTGCTCACTGAAAGACCTGCAGAACCATCAAACAAGGGAAGTAGTGCCATATGGTGGAAGCAGCTATGCACATTGATCAGTCGATCTTCAATAAACATGTCTAGAGATATTGGGTACTACTGGTTAAGGAGTGTGTTCTACATACTAATTGCAGTGAGTGCTGGCTCTTTCTTCTTCCACATTGGAACAAACAATCAAGCAATTGTGGCAAGAGGAAAGTGTGATGGTTTCATATATGGCCTCATGATTTGCCTGTCTATTGGAGGCATACCCTTTGTTATCGAAGAATTAAAGGTATTTAGACAGGAAAGACTAGGTGGGCATTACGGGGAAGCTCTGTTTGTGCTTTCCAACTTCCTCTCCTCACTCCCTTTCGTGGTTGCCATGGCTTTCTCTTCTGGAACAATACTATACAACATGGTCAAATTTCACTCAGGATTCTCCCATTACTTATATTTTTGCATCAATCTTTTCTGCTGCATTGCTGTCACGGAAGGAACCGCATTGATTGTGGCTGCAGTGGTTCCAAACCTCTTGATGGGCATTGGAGCTGCAGCTGGCATAACTGTATTCATGATGATGCCATCTCTTCTTTTCCGGAGGCTGATTGACCTTCCAAAAATCTTTTGGCGATACCCAATGTCATACCTCAGCTACGCAGCATGGTCAATACAGGGTCAGTATAAGAATGACATGATTGGGCTGGAATTTGACCCTCTGGTGGCTGGAGATCCAAAGTTGAAAGGTGAGGATGTACTCCTTCACTTGTATGGGATAAGCCCTGATGTTTCCAAATGGTGGGACTTGGCTGCTTTGGCATGCTTGTTACTTTGTGTACGGATCATCTTTTACTTGGTGCTCAAGTACAAAGAAAGAGCCTCATTGTCTATACAGAGACTTTATGCCAAAGCAACATTCCAACACCATCCCAAAAGAGATTCATTGAAGAAGGAGCAATTTGTCTCCAATTCCAAGAGACACCGAACCCTAAATTCGTTATCTTCTCAAGAGGGTCTTGGATCACCACTTCCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

692

Amino Acids

76.56

Weight (kDa)

8.94

Isoelectric Point (pI)

44.4

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_tran PF00005 52 - 203 1.2e-25 ABC transporter
AAA_29 PF13555 62 - 84 7.3e-06 P-loop containing region of AAA domain
ABC2_membrane_7 PF19055 232 - 285 1.1e-10 ABC-2 type transporter
ABC2_membrane PF01061 368 - 576 3.7e-25 ABC-2 type transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 62
Acc36I ACCTGC 2 cut(s) 62, 1066
AccB7I CCANNNNNTGG 2 cut(s) 1095, 1839
AccIII TCCGGA 1 cut(s) 1638
AciI CCGC 3 cut(s) 113, 116, 1542
AclWI GGATC 7 cut(s) 70, 370, 1024, 1037, 1766, 1889, 2068
AcoI YGGCCR 1 cut(s) 783
AcsI RAATTY 3 cut(s) 1466, 1748, 2032
AfaI GTAC 7 cut(s) 86, 291, 992, 1157, 1797, 1878, 1907
AfiI CCNNNNNNNGG 8 cut(s) 193, 249, 608, 1095, 1417, 1579, 1762, 1839
AflII CTTAAG 1 cut(s) 523
AflIII ACRYGT 1 cut(s) 1137
AgsI TTSAA 9 cut(s) 127, 479, 563, 718, 727, 1011, 1131, 1783, 1987
AjnI CCWGG 1 cut(s) 357
AjuI GAANNNNNNNTTGG 2 cut(s) 1940, 1972
AluBI AGCT 9 cut(s) 68, 398, 890, 979, 1105, 1376, 1592, 1598, 1695
AluI AGCT 9 cut(s) 68, 398, 890, 979, 1105, 1376, 1592, 1598, 1695
Alw21I GWGCWC 1 cut(s) 1902
Alw26I GTCTC 4 cut(s) 538, 1930, 2008, 2011
AlwI GGATC 7 cut(s) 70, 370, 1024, 1037, 1766, 1889, 2068
AlwNI CAGNNNCTG 2 cut(s) 40, 318
Aor13HI TCCGGA 1 cut(s) 1638
AoxI GGCC 3 cut(s) 610, 783, 1279
ApeKI GCWGC 9 cut(s) 68, 887, 1102, 1518, 1556, 1592, 1595, 1700, 1850
ApoI RAATTY 3 cut(s) 1466, 1748, 2032
AspLEI GCGC 1 cut(s) 488
AspS9I GGNCC 1 cut(s) 206
AsuHPI GGTGA 4 cut(s) 686, 764, 1799, 2055
AvaII GGWCC 1 cut(s) 206
BalI TGGCCA 1 cut(s) 785
BamHI GGATCC 1 cut(s) 1029
BbsI GAAGAC 1 cut(s) 706
Bbv12I GWGCWC 1 cut(s) 1902
BbvCI CCTCAGC 1 cut(s) 1691
BbvI GCAGC 9 cut(s) 55, 899, 1114, 1505, 1543, 1579, 1607, 1712, 1837
BccI CCATC 7 cut(s) 187, 775, 1075, 1259, 1573, 1633, 1974
BcgI CGANNNNNNTGC 3 cut(s) 28, 133, 167
BciT130I CCWGG 1 cut(s) 359
BclI TGATCA 1 cut(s) 1116
BcoDI GTCTC 4 cut(s) 538, 1930, 2008, 2011
BfaI CTAG 4 cut(s) 702, 884, 1143, 1355
BfmI CTRYAG 5 cut(s) 69, 924, 1059, 1557, 1593
BfrI CTTAAG 1 cut(s) 523
BfuAI ACCTGC 2 cut(s) 62, 1066
BmcAI AGTACT 2 cut(s) 86, 291
Bme1390I CCNGG 1 cut(s) 359
Bme18I GGWCC 1 cut(s) 206
BmgT120I GGNCC 1 cut(s) 206
BmiI GGNNCC 5 cut(s) 207, 410, 1031, 1540, 1566
BmrFI CCNGG 1 cut(s) 359
BmsI GCATC 5 cut(s) 229, 793, 929, 1512, 1611
BpiI GAAGAC 1 cut(s) 706
BpmI CTGGAG 2 cut(s) 822, 1788
Bpu10I CCTNAGC 1 cut(s) 1691
BpuEI CTTGAG 3 cut(s) 327, 1886, 2031
Bsa29I ATCGAT 1 cut(s) 708
BsaJI CCNNGG 3 cut(s) 243, 358, 1425
BsaWI WCCGGW 2 cut(s) 186, 1638
BsaXI ACNNNNNCTCC 2 cut(s) 1385, 1415
Bsc4I CCNNNNNNNGG 8 cut(s) 193, 249, 608, 1095, 1417, 1579, 1762, 1839
Bse1I ACTGG 2 cut(s) 606, 1166
Bse3DI GCAATG 2 cut(s) 657, 1521
BseAI TCCGGA 1 cut(s) 1638
BseBI CCWGG 1 cut(s) 359
BseCI ATCGAT 1 cut(s) 708
BseDI CCNNGG 3 cut(s) 243, 358, 1425
BseGI GGATG 4 cut(s) 195, 289, 1798, 1966
BseLI CCNNNNNNNGG 8 cut(s) 193, 249, 608, 1095, 1417, 1579, 1762, 1839
BseMI GCAATG 2 cut(s) 657, 1521
BseMII CTCAG 3 cut(s) 562, 1488, 1705
BseNI ACTGG 2 cut(s) 606, 1166
BseRI GAGGAG 4 cut(s) 446, 556, 728, 1393
BseXI GCAGC 9 cut(s) 55, 899, 1114, 1505, 1543, 1579, 1607, 1712, 1837
BseYI CCCAGC 1 cut(s) 248
BsgI GTGCAG 2 cut(s) 96, 304
BshFI GGCC 3 cut(s) 612, 785, 1281
BshVI ATCGAT 1 cut(s) 708
BsiHKAI GWGCWC 1 cut(s) 1902
BsiSI CCGG 4 cut(s) 187, 260, 807, 1639
BslFI GGGAC 1 cut(s) 1856
BslI CCNNNNNNNGG 8 cut(s) 193, 249, 608, 1095, 1417, 1579, 1762, 1839
BsmAI GTCTC 4 cut(s) 538, 1930, 2008, 2011
BsmFI GGGAC 1 cut(s) 1856
BsnI GGCC 3 cut(s) 612, 785, 1281
Bsp1286I GDGCHC 1 cut(s) 1902
Bsp13I TCCGGA 1 cut(s) 1638
Bsp19I CCATGG 1 cut(s) 1425
BspACI CCGC 3 cut(s) 113, 116, 1542
BspANI GGCC 3 cut(s) 612, 785, 1281
BspCNI CTCAG 3 cut(s) 561, 1487, 1704
BspDI ATCGAT 1 cut(s) 708
BspEI TCCGGA 1 cut(s) 1638
BspHI TCATGA 2 cut(s) 1284, 1614
BspLI GGNNCC 5 cut(s) 207, 410, 1031, 1540, 1566
BspMAI CTGCAG 4 cut(s) 73, 1063, 1561, 1597
BspMI ACCTGC 2 cut(s) 62, 1066
BspPI GGATC 7 cut(s) 70, 370, 1024, 1037, 1766, 1889, 2068
BspTI CTTAAG 1 cut(s) 523
BsrDI GCAATG 2 cut(s) 657, 1521
BsrI ACTGG 2 cut(s) 606, 1166
BssECI CCNNGG 3 cut(s) 243, 358, 1425
BssT1I CCWWGG 2 cut(s) 243, 1425
Bst2UI CCWGG 1 cut(s) 359
Bst4CI ACNGT 4 cut(s) 109, 373, 760, 1609
Bst6I CTCTTC 3 cut(s) 728, 1441, 1635
BstAFI CTTAAG 1 cut(s) 523
BstAPI GCANNNNNTGC 2 cut(s) 318, 1199
BstC8I GCNNGC 3 cut(s) 1204, 1600, 1861
BstDEI CTNAG 4 cut(s) 548, 742, 1474, 1691
BstDSI CCRYGG 1 cut(s) 1425
BstF5I GGATG 4 cut(s) 195, 289, 1798, 1966
BstHHI GCGC 1 cut(s) 488
BstMAI GTCTC 4 cut(s) 538, 1930, 2008, 2011
BstMWI GCNNNNNNNGC 8 cut(s) 74, 318, 492, 618, 782, 1199, 1247, 1856
BstNI CCWGG 1 cut(s) 359
BstNSI RCATGY 2 cut(s) 1141, 1863
BstSCI CCNGG 1 cut(s) 357
BstSFI CTRYAG 5 cut(s) 69, 924, 1059, 1557, 1593
BstV1I GCAGC 9 cut(s) 55, 899, 1114, 1505, 1543, 1579, 1607, 1712, 1837
BstV2I GAAGAC 1 cut(s) 706
BstX2I RGATCY 2 cut(s) 1029, 1771
BstYI RGATCY 2 cut(s) 1029, 1771
Bsu15I ATCGAT 1 cut(s) 708
BsuRI GGCC 3 cut(s) 612, 785, 1281
BsuTUI ATCGAT 1 cut(s) 708
BtgI CCRYGG 1 cut(s) 1425
BtsCI GGATG 4 cut(s) 195, 289, 1798, 1966
BtsI GCAGTG 2 cut(s) 1200, 1566
BtsIMutI CAGTG 4 cut(s) 613, 1047, 1200, 1566
BveI ACCTGC 2 cut(s) 62, 1066
Cac8I GCNNGC 3 cut(s) 1204, 1600, 1861
CaiI CAGNNNCTG 2 cut(s) 40, 318
CciI TCATGA 2 cut(s) 1284, 1614
CfoI GCGC 1 cut(s) 488
Cfr13I GGNCC 1 cut(s) 206
ClaI ATCGAT 1 cut(s) 708
CseI GACGC 1 cut(s) 1025
Csp6I GTAC 7 cut(s) 85, 290, 991, 1156, 1796, 1877, 1906
CviQI GTAC 7 cut(s) 85, 290, 991, 1156, 1796, 1877, 1906
DdeI CTNAG 4 cut(s) 548, 742, 1474, 1691
EaeI YGGCCR 1 cut(s) 783
Eam1104I CTCTTC 3 cut(s) 728, 1441, 1635
EarI CTCTTC 3 cut(s) 728, 1441, 1635
Eco130I CCWWGG 2 cut(s) 243, 1425
Eco47I GGWCC 1 cut(s) 206
EcoO109I RGGNCCY 1 cut(s) 206
EcoRII CCWGG 1 cut(s) 357
EcoT14I CCWWGG 2 cut(s) 243, 1425
ErhI CCWWGG 2 cut(s) 243, 1425
FalI AAGNNNNNCTT 2 cut(s) 2040, 2072
FaqI GGGAC 1 cut(s) 1856
FauNDI CATATG 3 cut(s) 334, 554, 1091
FbaI TGATCA 1 cut(s) 1116
FokI GGATG 4 cut(s) 202, 296, 1805, 1953
FspBI CTAG 4 cut(s) 702, 884, 1143, 1355
GlaI GCGC 1 cut(s) 487
GsaI CCCAGC 1 cut(s) 252
GsuI CTGGAG 2 cut(s) 822, 1788
HaeIII GGCC 3 cut(s) 612, 785, 1281
HapII CCGG 4 cut(s) 187, 260, 807, 1639
HgaI GACGC 1 cut(s) 1025
HhaI GCGC 1 cut(s) 488
Hin6I GCGC 1 cut(s) 486
HinP1I GCGC 1 cut(s) 486
HinfI GANTC 5 cut(s) 546, 909, 929, 1479, 1979
HpaII CCGG 4 cut(s) 187, 260, 807, 1639
HphI GGTGA 4 cut(s) 686, 764, 1799, 2055
Hpy166II GTNNAC 1 cut(s) 1877
Hpy188I TCNGA 4 cut(s) 377, 503, 868, 1034
Hpy8I GTNNAC 1 cut(s) 1877
Hpy99I CGWCG 1 cut(s) 145
HpyAV CCTTC 6 cut(s) 219, 860, 1529, 1664, 1811, 1984
HpyCH4III ACNGT 4 cut(s) 109, 373, 760, 1609
HpyCH4IV ACGT 1 cut(s) 140
HpyF10VI GCNNNNNNNGC 8 cut(s) 74, 318, 492, 618, 782, 1199, 1247, 1856
HpyF3I CTNAG 4 cut(s) 548, 742, 1474, 1691
HpySE526I ACGT 1 cut(s) 140
HspAI GCGC 1 cut(s) 486
Kpn2I TCCGGA 1 cut(s) 1638
Ksp22I TGATCA 1 cut(s) 1116
LmnI GCTCC 4 cut(s) 414, 741, 1589, 1993
Lsp1109I GCAGC 9 cut(s) 55, 899, 1114, 1505, 1543, 1579, 1607, 1712, 1837
LweI GCATC 5 cut(s) 229, 793, 929, 1512, 1611
MaeI CTAG 4 cut(s) 702, 884, 1143, 1355
MaeII ACGT 1 cut(s) 140
MaeIII GTNAC 4 cut(s) 337, 665, 1528, 1866
MfeI CAATTG 2 cut(s) 913, 1242
MflI RGATCY 2 cut(s) 1029, 1771
MhlI GDGCHC 1 cut(s) 1902
MlsI TGGCCA 1 cut(s) 785
MluNI TGGCCA 1 cut(s) 785
MlyI GAGTC 2 cut(s) 540, 923
MmeI TCCRAC 3 cut(s) 845, 1416, 1984
Mox20I TGGCCA 1 cut(s) 785
MroI TCCGGA 1 cut(s) 1638
MscI TGGCCA 1 cut(s) 785
MseI TTAA 4 cut(s) 524, 935, 1166, 1331
MslI CAYNNNNRTG 3 cut(s) 467, 1619, 1809
Msp20I TGGCCA 1 cut(s) 785
MspA1I CMGCKG 2 cut(s) 68, 1598
MspCI CTTAAG 1 cut(s) 523
MspI CCGG 4 cut(s) 187, 260, 807, 1639
MspR9I CCNGG 1 cut(s) 359
MunI CAATTG 2 cut(s) 913, 1242
MvaI CCWGG 1 cut(s) 359
MwoI GCNNNNNNNGC 8 cut(s) 74, 318, 492, 618, 782, 1199, 1247, 1856
NcoI CCATGG 1 cut(s) 1425
NdeI CATATG 3 cut(s) 334, 554, 1091
NlaIV GGNNCC 5 cut(s) 207, 410, 1031, 1540, 1566
NmuCI GTSAC 2 cut(s) 665, 1528
NspI RCATGY 2 cut(s) 1141, 1863
PaeI GCATGC 1 cut(s) 1863
PagI TCATGA 2 cut(s) 1284, 1614
PaqCI CACCTGC 1 cut(s) 62
PciI ACATGT 1 cut(s) 1137
PfeI GAWTC 3 cut(s) 909, 1479, 1979
PflMI CCANNNNNTGG 2 cut(s) 1095, 1839
PleI GAGTC 2 cut(s) 540, 923
PpsI GAGTC 2 cut(s) 540, 923
PpuMI RGGWCCY 1 cut(s) 206
PscI ACATGT 1 cut(s) 1137
Psp5II RGGWCCY 1 cut(s) 206
Psp6I CCWGG 1 cut(s) 357
PspFI CCCAGC 1 cut(s) 248
PspGI CCWGG 1 cut(s) 357
PspN4I GGNNCC 5 cut(s) 207, 410, 1031, 1540, 1566
PspPI GGNCC 1 cut(s) 206
PspPPI RGGWCCY 1 cut(s) 206
PstI CTGCAG 4 cut(s) 73, 1063, 1561, 1597
PstNI CAGNNNCTG 2 cut(s) 40, 318
PsuI RGATCY 2 cut(s) 1029, 1771
PvuII CAGCTG 2 cut(s) 68, 1598
RsaI GTAC 7 cut(s) 86, 291, 992, 1157, 1797, 1878, 1907
RsaNI GTAC 7 cut(s) 85, 290, 991, 1156, 1796, 1877, 1906
RseI CAYNNNNRTG 3 cut(s) 467, 1619, 1809
SaqAI TTAA 4 cut(s) 524, 935, 1166, 1331
Sau96I GGNCC 1 cut(s) 206
ScaI AGTACT 2 cut(s) 86, 291
SchI GAGTC 2 cut(s) 540, 923
ScrFI CCNGG 1 cut(s) 359
SduI GDGCHC 1 cut(s) 1902
SfaNI GCATC 5 cut(s) 229, 793, 929, 1512, 1611
SfcI CTRYAG 5 cut(s) 69, 924, 1059, 1557, 1593
SinI GGWCC 1 cut(s) 206
SmiMI CAYNNNNRTG 3 cut(s) 467, 1619, 1809
SmlI CTYRAG 4 cut(s) 342, 523, 1901, 2046
SmoI CTYRAG 4 cut(s) 342, 523, 1901, 2046
SphI GCATGC 1 cut(s) 1863
SsiI CCGC 3 cut(s) 113, 116, 1542
SspMI CTAG 4 cut(s) 702, 884, 1143, 1355
StyD4I CCNGG 1 cut(s) 357
StyI CCWWGG 2 cut(s) 243, 1425
TaaI ACNGT 4 cut(s) 109, 373, 760, 1609
TaiI ACGT 1 cut(s) 143
TaqI TCGA 6 cut(s) 14, 143, 708, 853, 1123, 1323
TatI WGTACW 4 cut(s) 84, 289, 1795, 1905
TauI GCSGC 2 cut(s) 116, 119
TfiI GAWTC 3 cut(s) 909, 1479, 1979
Tru1I TTAA 4 cut(s) 524, 935, 1166, 1331
Tru9I TTAA 4 cut(s) 524, 935, 1166, 1331
TscAI CASTG 4 cut(s) 613, 1054, 1200, 1566
TseFI GTSAC 2 cut(s) 665, 1528
TseI GCWGC 9 cut(s) 68, 887, 1102, 1518, 1556, 1592, 1595, 1700, 1850
Tsp45I GTSAC 2 cut(s) 665, 1528
TspDTI ATGAA 5 cut(s) 321, 612, 1261, 1603, 1971
TspGWI ACGGA 3 cut(s) 684, 1547, 1894
TspRI CASTG 4 cut(s) 613, 1054, 1200, 1566
Van91I CCANNNNNTGG 2 cut(s) 1095, 1839
Vha464I CTTAAG 1 cut(s) 523
VpaK11BI GGWCC 1 cut(s) 206
XapI RAATTY 3 cut(s) 1466, 1748, 2032
XbaI TCTAGA 1 cut(s) 1142
XceI RCATGY 2 cut(s) 1141, 1863
XcmI CCANNNNNNNNNTGG 1 cut(s) 1665
XspI CTAG 4 cut(s) 702, 884, 1143, 1355
ZrmI AGTACT 2 cut(s) 86, 291
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.