Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0008927

Physical Location & Seq

Genomic Coordinates Reverse (-)

20454314 .. 20457859

Gene Structure 3546 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g26760.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1461 bp

ATGTTGGAGAACATCAATATGGCTCAACATGAAGAAGAAGCAATTGATTCAAATGGGTTTCTTCAAAATCCAAACCCAGTTGCTGTACTTGGATCCAATCCTCCTCCTGTCAAAAAGAAGAGAAACCTCCCAGGAAACCCAGATCCTGAGGCAGAAGTAATAGCCTTGTCTCCAAAGACTCTGATGGCCACCAACAGATTCTTGTGTGAAATATGCGGTAAGGGATTTCAGAGAGACCAAAACCTACAGCTGCACCGCCGCGGACACAACCTTCCATGGAAGCTCAAGCAAAGAACAAGCAAAGAGCCGAGGAAGCGCGTCTACGTGTGCCCGGAAAAGACTTGTGTCCACCACCACGCGTCTAGGGCGCTCGGAGATCTGACCGGAATAAAGAAGCACTTCTGCCGCAAGCACGGCGAGAAGAAGTGGAAGTGTGAGAAATGCTCCAAGCGCTACGCGGTGCAGTCGGATTGGAAAGCTCACTCAAAGACCTGTGGCACCAGGGAGTACAAATGTGACTGTGGAACTCTATTTTCACGGCGTGATAGCTTCATCACACACCGAGCCTTCTGTGACGCCTTAGCTGAAGAAACAGCTAGAGTAAATGCAGTATCCAACATCCACAACAACGCAATGCCCAGCAATATCAATTATCATCACTACATGGGAAACAATGCGTCGTCACTACTACTAGGACCTCCTAACATGTCACAACTACAATTTTCTTCTATTTTCAAGCCAATCTCGAGCAATGATACCCCCGACGCCATGAGCCAAACAAGCCGGAGTCTATCTCTCTGGATGGGCCAAGGATCTAACGGCACCCACGAAGAAATGACTGCTAATAATCATCATCATCAGCATCAACTTGGGTCTGTGAGTTCATCAGCTGGTTCAATATTTGGTGATCCTAATAATATTAGTGTTTCGTGTTCAGAACCTCCTCCGCCTTCTGATCATTATCAACTGAATTGGGTTCTTGGAAGTAATAACAAGCTTTCTCCATCGAACAATGCTCATCATCAAGATCAGTTAACAATCACAAGCATGAGCAGTGCTGCTAACTCACTTCCTTCTATGTACACACATCAAATGCCTTCAGCAAACATGTCAGCTACGGCTTTGTTACAAAAGGCAGCCCAAATTGGGGCAACTTCAACTGACAAGACATCACTGCTTGGAAGTTTTGGATTGAAGAGCAACAACAACAATAGTACCAGTAGCGCTAGTCATCAAGCAGTGACTCAAGTTCAAGATGGGAGCAAAGTCTGTGGACTCTACGGCACTGCGGAGGACCAAGGTGCTCATGATCATCATCTACTGCAACACATGCATCAAGCGAAACGCCGCCACATACAGAGCGAAGAGGGCGCCGGAGGAGGGCAGACAAGGGATTTCCTTGGTGTTGGCGTGCAGACCATTTGCCACTCTTCACCAATCAATGGATATTGGCGGGTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001067 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0007568 GO:0008150 GO:0008356 GO:0009314 GO:0009416 GO:0009628 GO:0009648 GO:0009791 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010150 GO:0010228 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0022414 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032501 GO:0032502 GO:0040034 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044212 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0048366 GO:0048367 GO:0048506 GO:0048509 GO:0048510 GO:0048518 GO:0048522 GO:0048573 GO:0048608 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051301 GO:0060255 GO:0061458 GO:0065007 GO:0080090 GO:0090693 GO:0097159 GO:0099402 GO:0140110 GO:1901363 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-C2H2

Protein Analysis

487

Amino Acids

53.46

Weight (kDa)

8.98

Isoelectric Point (pI)

56.71

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
C2H2-2nd_BIRD-IDD	PF22996	104 - 138	4.7e-20	BIRD-IDD transcription factor, second C2H2 zinc finger
C2CH-3rd_BIRD-IDD	PF22995	142 - 166	4.8e-15	BIRD-IDD transcription factor, third C2HC zinc finger
C2CH-4th_BIRD-IDD	PF22992	169 - 208	1.7e-24	BIRD-IDD transcription factor, fourth C2HC zinc finger

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008927)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G03840 AT1G03840 AT5G44160 AT5G44160
fragaria_vesca	FvH4_6g26760 FvH4_6g26760 FvH4_6g26760
prunus_persica	Prupe.3G128100_v2.0.a1 Prupe.3G128100_v2.0.a1
rosa_chinensis	RchiOBHm_Chr0c19g0500141 RchiOBHm_Chr0c19g0500151 RchiOBHm_Chr2g0128541
rosa_laevigata	RLG00000018991
rosa_multiflora	Rmu_sc0002162.1_g000007
rosa_roxburghii	Rroxscaffold_2G00115690 Rroxscaffold_2G00116120
rosa_rugosa	Rorug02G0277800
rosa_samantha	Rh2AG329200 Rh2BG338900 Rh2CG315900 Rh2DG355800
rosa_wichuraiana	Rw2G026680

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	3 cut(s)	497, 821, 1370
AccB7I	CCANNNNNTGG	1 cut(s)	1442
AccI	GTMKAC	1 cut(s)	321
AccII	CGCG	4 cut(s)	261, 318, 359, 458
AclWI	GGATC	5 cut(s)	87, 100, 137, 820, 902
AcoI	YGGCCR	1 cut(s)	186
AcuI	CTGAAG	2 cut(s)	606, 1083
AcyI	GRCGYC	3 cut(s)	576, 765, 1371
AdeI	CACNNNGTG	1 cut(s)	542
AfaI	GTAC	4 cut(s)	87, 509, 1082, 1216
AfeI	AGCGCT	2 cut(s)	452, 1225
AfiI	CCNNNNNNNGG	4 cut(s)	1146, 1147, 1380, 1442
AflIII	ACRYGT	4 cut(s)	324, 357, 705, 1107
AgsI	TTSAA	7 cut(s)	51, 65, 736, 897, 1158, 1195, 1253
AjnI	CCWGG	2 cut(s)	130, 500
AluBI	AGCT	9 cut(s)	250, 283, 479, 549, 584, 596, 890, 997, 1115
AluI	AGCT	9 cut(s)	250, 283, 479, 549, 584, 596, 890, 997, 1115
Alw21I	GWGCWC	1 cut(s)	1306
Alw26I	GTCTC	2 cut(s)	174, 228
AlwI	GGATC	5 cut(s)	87, 100, 137, 820, 902
AlwNI	CAGNNNCTG	2 cut(s)	83, 146
Ama87I	CYCGRG	1 cut(s)	745
Aor51HI	AGCGCT	2 cut(s)	452, 1225
AoxI	GGCC	2 cut(s)	186, 805
ApeKI	GCWGC	3 cut(s)	250, 1058, 1136
Asp700I	GAANNNNTTC	1 cut(s)	398
AspLEI	GCGC	5 cut(s)	318, 370, 453, 1226, 1373
AspS9I	GGNCC	3 cut(s)	695, 805, 1294
AsuC2I	CCSGG	1 cut(s)	332
AsuHPI	GGTGA	2 cut(s)	917, 1425
AvaI	CYCGRG	1 cut(s)	745
AvaII	GGWCC	2 cut(s)	695, 1294
AxyI	CCTNAGG	1 cut(s)	147
BaeGI	GKGCMC	1 cut(s)	332
BaeI	ACNNNNGTAYC	2 cut(s)	1198, 1231
BalI	TGGCCA	1 cut(s)	188
BamHI	GGATCC	1 cut(s)	92
BanI	GGYRCC	3 cut(s)	497, 821, 1370
BarI	GAAGNNNNNNTAC	2 cut(s)	305, 337
Bbv12I	GWGCWC	1 cut(s)	1306
BbvI	GCAGC	3 cut(s)	237, 1045, 1148
BccI	CCATC	4 cut(s)	178, 796, 1012, 1250
BceAI	ACGGC	5 cut(s)	430, 554, 835, 1134, 1297
BciT130I	CCWGG	2 cut(s)	132, 502
BciVI	GTATCC	1 cut(s)	622
BclI	TGATCA	2 cut(s)	955, 1309
BcnI	CCSGG	1 cut(s)	332
BcoDI	GTCTC	2 cut(s)	174, 228
BfaI	CTAG	4 cut(s)	363, 597, 692, 1227
BfmI	CTRYAG	1 cut(s)	245
BfoI	RGCGCY	4 cut(s)	371, 454, 1227, 1374
BfuI	GTATCC	1 cut(s)	622
BglII	AGATCT	1 cut(s)	376
BisI	GCNGC	6 cut(s)	251, 259, 406, 1059, 1137, 1348
BlsI	GCNGC	6 cut(s)	252, 260, 407, 1060, 1138, 1349
Bme1390I	CCNGG	3 cut(s)	132, 332, 502
Bme18I	GGWCC	2 cut(s)	695, 1294
BmeT110I	CYCGRG	1 cut(s)	745
BmgT120I	GGNCC	3 cut(s)	695, 805, 1294
BmiI	GGNNCC	4 cut(s)	94, 499, 823, 1372
BmrFI	CCNGG	3 cut(s)	132, 332, 502
BmrI	ACTGGG	1 cut(s)	71
BmsI	GCATC	2 cut(s)	871, 1342
BmuI	ACTGGG	1 cut(s)	71
BoxI	GACNNNNGTC	1 cut(s)	344
BplI	GAGNNNNNCTC	4 cut(s)	428, 460, 778, 810
Bpu10I	CCTNAGC	1 cut(s)	580
BpuEI	CTTGAG	2 cut(s)	269, 1230
BpuMI	CCSGG	1 cut(s)	332
BsaAI	YACGTR	1 cut(s)	325
BsaBI	GATNNNNATC	2 cut(s)	960, 1314
BsaHI	GRCGYC	3 cut(s)	576, 765, 1371
BsaI	GGTCTC	1 cut(s)	228
BsaJI	CCNNGG	8 cut(s)	130, 259, 275, 308, 501, 808, 1297, 1399
BsaWI	WCCGGW	1 cut(s)	383
Bsc4I	CCNNNNNNNGG	4 cut(s)	1146, 1147, 1380, 1442
Bse1I	ACTGG	2 cut(s)	77, 1218
Bse21I	CCTNAGG	1 cut(s)	147
Bse3DI	GCAATG	2 cut(s)	639, 757
Bse8I	GATNNNNATC	2 cut(s)	960, 1314
BseBI	CCWGG	2 cut(s)	132, 502
BseDI	CCNNGG	8 cut(s)	130, 259, 275, 308, 501, 808, 1297, 1399
BseGI	GGATG	2 cut(s)	618, 807
BseJI	GATNNNNATC	2 cut(s)	960, 1314
BseLI	CCNNNNNNNGG	4 cut(s)	1146, 1147, 1380, 1442
BseMI	GCAATG	2 cut(s)	639, 757
BseMII	CTCAG	1 cut(s)	138
BseNI	ACTGG	2 cut(s)	77, 1218
BseRI	GAGGAG	3 cut(s)	93, 933, 1392
BseSI	GKGCMC	1 cut(s)	332
BseXI	GCAGC	3 cut(s)	237, 1045, 1148
BseYI	CCCAGC	1 cut(s)	638
BsgI	GTGCAG	3 cut(s)	236, 482, 1433
Bsh1236I	CGCG	4 cut(s)	261, 318, 359, 458
BshFI	GGCC	2 cut(s)	188, 807
BshNI	GGYRCC	3 cut(s)	497, 821, 1370
BsiHKAI	GWGCWC	1 cut(s)	1306
BsiHKCI	CYCGRG	1 cut(s)	745
BsiSI	CCGG	4 cut(s)	332, 384, 784, 1374
BslI	CCNNNNNNNGG	4 cut(s)	1146, 1147, 1380, 1442
BsmAI	GTCTC	2 cut(s)	174, 228
BsnI	GGCC	2 cut(s)	188, 807
Bso31I	GGTCTC	1 cut(s)	228
BsoBI	CYCGRG	1 cut(s)	745
Bsp1286I	GDGCHC	2 cut(s)	332, 1306
Bsp1407I	TGTACA	1 cut(s)	1080
Bsp143I	GATC	8 cut(s)	92, 142, 376, 812, 907, 955, 1027, 1309
Bsp19I	CCATGG	1 cut(s)	275
BspANI	GGCC	2 cut(s)	188, 807
BspCNI	CTCAG	1 cut(s)	139
BspFNI	CGCG	4 cut(s)	261, 318, 359, 458
BspHI	TCATGA	1 cut(s)	1306
BspLI	GGNNCC	4 cut(s)	94, 499, 823, 1372
BspPI	GGATC	5 cut(s)	87, 100, 137, 820, 902
BspQI	GCTCTTC	1 cut(s)	1190
BspT107I	GGYRCC	3 cut(s)	497, 821, 1370
BspTNI	GGTCTC	1 cut(s)	228
BsrDI	GCAATG	2 cut(s)	639, 757
BsrGI	TGTACA	1 cut(s)	1080
BsrI	ACTGG	2 cut(s)	77, 1218
BssECI	CCNNGG	8 cut(s)	130, 259, 275, 308, 501, 808, 1297, 1399
BssMI	GATC	8 cut(s)	92, 142, 376, 812, 907, 955, 1027, 1309
BssNI	GRCGYC	3 cut(s)	576, 765, 1371
BssT1I	CCWWGG	4 cut(s)	275, 808, 1297, 1399
Bst2UI	CCWGG	2 cut(s)	132, 502
Bst4CI	ACNGT	1 cut(s)	521
Bst6I	CTCTTC	4 cut(s)	113, 1190, 1359, 1435
BstACI	GRCGYC	3 cut(s)	576, 765, 1371
BstAPI	GCANNNNNTGC	1 cut(s)	1330
BstAUI	TGTACA	1 cut(s)	1080
BstBAI	YACGTR	1 cut(s)	325
BstC8I	GCNNGC	2 cut(s)	410, 1412
BstDEI	CTNAG	2 cut(s)	147, 580
BstDSI	CCRYGG	2 cut(s)	259, 275
BstF5I	GGATG	2 cut(s)	618, 807
BstFNI	CGCG	4 cut(s)	261, 318, 359, 458
BstH2I	RGCGCY	4 cut(s)	371, 454, 1227, 1374
BstHHI	GCGC	5 cut(s)	318, 370, 453, 1226, 1373
BstKTI	GATC	8 cut(s)	95, 145, 379, 815, 910, 958, 1030, 1312
BstMAI	GTCTC	2 cut(s)	174, 228
BstMBI	GATC	8 cut(s)	92, 142, 376, 812, 907, 955, 1027, 1309
BstMWI	GCNNNNNNNGC	7 cut(s)	313, 365, 414, 450, 780, 1330, 1368
BstNI	CCWGG	2 cut(s)	132, 502
BstNSI	RCATGY	3 cut(s)	709, 1111, 1333
BstPAI	GACNNNNGTC	1 cut(s)	344
BstSCI	CCNGG	3 cut(s)	130, 330, 500
BstSFI	CTRYAG	1 cut(s)	245
BstSLI	GKGCMC	1 cut(s)	332
BstUI	CGCG	4 cut(s)	261, 318, 359, 458
BstV1I	GCAGC	3 cut(s)	237, 1045, 1148
BstX2I	RGATCY	4 cut(s)	92, 142, 376, 812
BstYI	RGATCY	4 cut(s)	92, 142, 376, 812
Bsu36I	CCTNAGG	1 cut(s)	147
BsuI	GTATCC	1 cut(s)	622
BsuRI	GGCC	2 cut(s)	188, 807
BtgI	CCRYGG	2 cut(s)	259, 275
BtsCI	GGATG	2 cut(s)	618, 807
BtsI	GCAGTG	4 cut(s)	1060, 1172, 1245, 1284
BtsIMutI	CAGTG	4 cut(s)	1060, 1172, 1245, 1284
Cac8I	GCNNGC	2 cut(s)	410, 1412
CaiI	CAGNNNCTG	2 cut(s)	83, 146
CciI	TCATGA	1 cut(s)	1306
CfoI	GCGC	5 cut(s)	318, 370, 453, 1226, 1373
Cfr13I	GGNCC	3 cut(s)	695, 805, 1294
Cfr42I	CCGCGG	1 cut(s)	262
CseI	GACGC	5 cut(s)	307, 348, 584, 666, 773
Csp6I	GTAC	4 cut(s)	86, 508, 1081, 1215
CspCI	CAANNNNNGTGG	2 cut(s)	1252, 1287
CviAII	CATG	9 cut(s)	29, 276, 664, 706, 769, 1048, 1108, 1307, 1330
CviQI	GTAC	4 cut(s)	86, 508, 1081, 1215
DdeI	CTNAG	2 cut(s)	147, 580
DinI	GGCGCC	1 cut(s)	1372
DpnI	GATC	8 cut(s)	94, 144, 378, 814, 909, 957, 1029, 1311
DpnII	GATC	8 cut(s)	92, 142, 376, 812, 907, 955, 1027, 1309
DraIII	CACNNNGTG	1 cut(s)	542
EaeI	YGGCCR	1 cut(s)	186
Eam1104I	CTCTTC	4 cut(s)	113, 1190, 1359, 1435
EarI	CTCTTC	4 cut(s)	113, 1190, 1359, 1435
EciI	GGCGGA	1 cut(s)	936
Eco130I	CCWWGG	4 cut(s)	275, 808, 1297, 1399
Eco31I	GGTCTC	1 cut(s)	228
Eco47I	GGWCC	2 cut(s)	695, 1294
Eco47III	AGCGCT	2 cut(s)	452, 1225
Eco57I	CTGAAG	2 cut(s)	606, 1083
Eco81I	CCTNAGG	1 cut(s)	147
Eco88I	CYCGRG	1 cut(s)	745
EcoO109I	RGGNCCY	1 cut(s)	695
EcoRII	CCWGG	2 cut(s)	130, 500
EcoT14I	CCWWGG	4 cut(s)	275, 808, 1297, 1399
EcoT22I	ATGCAT	1 cut(s)	1335
EgeI	GGCGCC	1 cut(s)	1372
EheI	GGCGCC	1 cut(s)	1372
ErhI	CCWWGG	4 cut(s)	275, 808, 1297, 1399
FaeI	CATG	9 cut(s)	32, 279, 667, 709, 772, 1051, 1111, 1310, 1333
FalI	AAGNNNNNCTT	2 cut(s)	383, 415
FatI	CATG	9 cut(s)	28, 275, 663, 705, 768, 1047, 1107, 1306, 1329
FauI	CCCGC	1 cut(s)	1446
FbaI	TGATCA	2 cut(s)	955, 1309
FblI	GTMKAC	1 cut(s)	321
Fnu4HI	GCNGC	6 cut(s)	251, 259, 406, 1059, 1137, 1348
FokI	GGATG	2 cut(s)	605, 814
Fsp4HI	GCNGC	6 cut(s)	251, 259, 406, 1059, 1137, 1348
FspBI	CTAG	4 cut(s)	363, 597, 692, 1227
GlaI	GCGC	5 cut(s)	317, 369, 452, 1225, 1372
GluI	GCNGC	6 cut(s)	251, 259, 406, 1059, 1137, 1348
GsaI	CCCAGC	1 cut(s)	642
HaeII	RGCGCY	4 cut(s)	371, 454, 1227, 1374
HaeIII	GGCC	2 cut(s)	188, 807
HapII	CCGG	4 cut(s)	332, 384, 784, 1374
HgaI	GACGC	5 cut(s)	307, 348, 584, 666, 773
HhaI	GCGC	5 cut(s)	318, 370, 453, 1226, 1373
Hin1I	GRCGYC	3 cut(s)	576, 765, 1371
Hin1II	CATG	9 cut(s)	32, 279, 667, 709, 772, 1051, 1111, 1310, 1333
Hin6I	GCGC	5 cut(s)	316, 368, 451, 1224, 1371
HinP1I	GCGC	5 cut(s)	316, 368, 451, 1224, 1371
HincII	GTYRAC	1 cut(s)	1035
HindII	GTYRAC	1 cut(s)	1035
HindIII	AAGCTT	1 cut(s)	995
HinfI	GANTC	6 cut(s)	47, 178, 198, 787, 1243, 1275
HpaI	GTTAAC	1 cut(s)	1035
HpaII	CCGG	4 cut(s)	332, 384, 784, 1374
HphI	GGTGA	2 cut(s)	917, 1425
Hpy166II	GTNNAC	5 cut(s)	322, 349, 1035, 1083, 1274
Hpy188I	TCNGA	7 cut(s)	183, 231, 374, 381, 469, 937, 955
Hpy188III	TCNNGA	6 cut(s)	146, 745, 799, 1025, 1253, 1307
Hpy8I	GTNNAC	5 cut(s)	322, 349, 1035, 1083, 1274
Hpy99I	CGWCG	2 cut(s)	682, 767
HpyAV	CCTTC	5 cut(s)	281, 577, 960, 1083, 1107
HpyCH4III	ACNGT	1 cut(s)	521
HpyCH4IV	ACGT	1 cut(s)	324
HpyCH4V	TGCA	6 cut(s)	253, 463, 608, 1324, 1333, 1414
HpyF10VI	GCNNNNNNNGC	7 cut(s)	313, 365, 414, 450, 780, 1330, 1368
HpyF3I	CTNAG	2 cut(s)	147, 580
HpySE526I	ACGT	1 cut(s)	324
Hsp92I	GRCGYC	3 cut(s)	576, 765, 1371
Hsp92II	CATG	9 cut(s)	32, 279, 667, 709, 772, 1051, 1111, 1310, 1333
HspAI	GCGC	5 cut(s)	316, 368, 451, 1224, 1371
KasI	GGCGCC	1 cut(s)	1370
Ksp22I	TGATCA	2 cut(s)	955, 1309
KspAI	GTTAAC	1 cut(s)	1035
KspI	CCGCGG	1 cut(s)	262
Kzo9I	GATC	8 cut(s)	92, 142, 376, 812, 907, 955, 1027, 1309
LguI	GCTCTTC	1 cut(s)	1190
LmnI	GCTCC	2 cut(s)	449, 1260
Lsp1109I	GCAGC	3 cut(s)	237, 1045, 1148
LweI	GCATC	2 cut(s)	871, 1342
MaeI	CTAG	4 cut(s)	363, 597, 692, 1227
MaeII	ACGT	1 cut(s)	324
MaeIII	GTNAC	6 cut(s)	515, 572, 681, 708, 1125, 1240
MalI	GATC	8 cut(s)	94, 144, 378, 814, 909, 957, 1029, 1311
MboI	GATC	8 cut(s)	92, 142, 376, 812, 907, 955, 1027, 1309
MfeI	CAATTG	1 cut(s)	42
MflI	RGATCY	4 cut(s)	92, 142, 376, 812
MhlI	GDGCHC	2 cut(s)	332, 1306
MlsI	TGGCCA	1 cut(s)	188
MluCI	AATT	5 cut(s)	42, 649, 719, 970, 1143
MluI	ACGCGT	1 cut(s)	357
MluNI	TGGCCA	1 cut(s)	188
Mly113I	GGCGCC	1 cut(s)	1371
MlyI	GAGTC	4 cut(s)	172, 796, 1237, 1269
MmeI	TCCRAC	2 cut(s)	447, 639
Mox20I	TGGCCA	1 cut(s)	188
Mph1103I	ATGCAT	1 cut(s)	1335
MroXI	GAANNNNTTC	1 cut(s)	398
MscI	TGGCCA	1 cut(s)	188
MseI	TTAA	1 cut(s)	1034
MslI	CAYNNNNRTG	2 cut(s)	17, 1046
Msp20I	TGGCCA	1 cut(s)	188
MspA1I	CMGCKG	3 cut(s)	250, 261, 890
MspI	CCGG	4 cut(s)	332, 384, 784, 1374
MspR9I	CCNGG	3 cut(s)	132, 332, 502
MunI	CAATTG	1 cut(s)	42
MvaI	CCWGG	2 cut(s)	132, 502
MvnI	CGCG	4 cut(s)	261, 318, 359, 458
MwoI	GCNNNNNNNGC	7 cut(s)	313, 365, 414, 450, 780, 1330, 1368
NarI	GGCGCC	1 cut(s)	1371
NciI	CCSGG	1 cut(s)	332
NcoI	CCATGG	1 cut(s)	275
NdeII	GATC	8 cut(s)	92, 142, 376, 812, 907, 955, 1027, 1309
NlaIII	CATG	9 cut(s)	32, 279, 667, 709, 772, 1051, 1111, 1310, 1333
NlaIV	GGNNCC	4 cut(s)	94, 499, 823, 1372
NmeAIII	GCCGAG	1 cut(s)	333
NmuCI	GTSAC	5 cut(s)	515, 572, 681, 708, 1240
NsiI	ATGCAT	1 cut(s)	1335
NspI	RCATGY	3 cut(s)	709, 1111, 1333
PaeR7I	CTCGAG	1 cut(s)	745
PagI	TCATGA	1 cut(s)	1306
PciI	ACATGT	2 cut(s)	705, 1107
PciSI	GCTCTTC	1 cut(s)	1190
PcsI	WCGNNNNNNNCGW	1 cut(s)	825
PdmI	GAANNNNTTC	1 cut(s)	398
PfeI	GAWTC	2 cut(s)	47, 198
PflMI	CCANNNNNTGG	1 cut(s)	1442
PkrI	GCNGC	6 cut(s)	252, 260, 407, 1060, 1138, 1349
PleI	GAGTC	4 cut(s)	172, 795, 1237, 1269
PluTI	GGCGCC	1 cut(s)	1374
PpsI	GAGTC	4 cut(s)	172, 795, 1237, 1269
Ppu21I	YACGTR	1 cut(s)	325
PpuMI	RGGWCCY	1 cut(s)	695
PscI	ACATGT	2 cut(s)	705, 1107
PshAI	GACNNNNGTC	1 cut(s)	344
Psp5II	RGGWCCY	1 cut(s)	695
Psp6I	CCWGG	2 cut(s)	130, 500
PspFI	CCCAGC	1 cut(s)	638
PspGI	CCWGG	2 cut(s)	130, 500
PspN4I	GGNNCC	4 cut(s)	94, 499, 823, 1372
PspPI	GGNCC	3 cut(s)	695, 805, 1294
PspPPI	RGGWCCY	1 cut(s)	695
PstNI	CAGNNNCTG	2 cut(s)	83, 146
PsuI	RGATCY	4 cut(s)	92, 142, 376, 812
PvuII	CAGCTG	2 cut(s)	250, 890
RsaI	GTAC	4 cut(s)	87, 509, 1082, 1216
RsaNI	GTAC	4 cut(s)	86, 508, 1081, 1215
RseI	CAYNNNNRTG	2 cut(s)	17, 1046
SacII	CCGCGG	1 cut(s)	262
SapI	GCTCTTC	1 cut(s)	1190
SaqAI	TTAA	1 cut(s)	1034
SatI	GCNGC	6 cut(s)	251, 259, 406, 1059, 1137, 1348
Sau3AI	GATC	8 cut(s)	92, 142, 376, 812, 907, 955, 1027, 1309
Sau96I	GGNCC	3 cut(s)	695, 805, 1294
SchI	GAGTC	4 cut(s)	172, 796, 1237, 1269
ScrFI	CCNGG	3 cut(s)	132, 332, 502
SduI	GDGCHC	2 cut(s)	332, 1306
SfaNI	GCATC	2 cut(s)	871, 1342
SfcI	CTRYAG	1 cut(s)	245
SfoI	GGCGCC	1 cut(s)	1372
Sfr274I	CTCGAG	1 cut(s)	745
Sfr303I	CCGCGG	1 cut(s)	262
SgrBI	CCGCGG	1 cut(s)	262
SinI	GGWCC	2 cut(s)	695, 1294
SlaI	CTCGAG	1 cut(s)	745
SmiMI	CAYNNNNRTG	2 cut(s)	17, 1046
SmlI	CTYRAG	3 cut(s)	284, 745, 1245
SmoI	CTYRAG	3 cut(s)	284, 745, 1245
Sse9I	AATT	5 cut(s)	42, 649, 719, 970, 1143
SspDI	GGCGCC	1 cut(s)	1370
SspI	AATATT	2 cut(s)	900, 919
SspMI	CTAG	4 cut(s)	363, 597, 692, 1227
StyD4I	CCNGG	3 cut(s)	130, 330, 500
StyI	CCWWGG	4 cut(s)	275, 808, 1297, 1399
TaaI	ACNGT	1 cut(s)	521
TaiI	ACGT	1 cut(s)	327
TaqI	TCGA	2 cut(s)	746, 1007
TasI	AATT	5 cut(s)	42, 649, 719, 970, 1143
TatI	WGTACW	3 cut(s)	85, 507, 1080
TauI	GCSGC	3 cut(s)	261, 408, 1350
TfiI	GAWTC	2 cut(s)	47, 198
Tru1I	TTAA	1 cut(s)	1034
Tru9I	TTAA	1 cut(s)	1034
TscAI	CASTG	4 cut(s)	1060, 1179, 1245, 1291
TseFI	GTSAC	5 cut(s)	515, 572, 681, 708, 1240
TseI	GCWGC	3 cut(s)	250, 1058, 1136
Tsp45I	GTSAC	5 cut(s)	515, 572, 681, 708, 1240
TspDTI	ATGAA	3 cut(s)	45, 541, 873
TspRI	CASTG	4 cut(s)	1060, 1179, 1245, 1291
Van91I	CCANNNNNTGG	1 cut(s)	1442
VpaK11BI	GGWCC	2 cut(s)	695, 1294
XceI	RCATGY	3 cut(s)	709, 1111, 1333
XhoI	CTCGAG	1 cut(s)	745
XmiI	GTMKAC	1 cut(s)	321
XmnI	GAANNNNTTC	1 cut(s)	398
XspI	CTAG	4 cut(s)	363, 597, 692, 1227
Zsp2I	ATGCAT	1 cut(s)	1335

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.