Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0008927

Physical Location & Seq

Genomic Coordinates Forward (+)

43068896 .. 43071712

Gene Structure 2817 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00116120.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1296 bp

ATGTTGGAGAAGATCAATATGGCTCATGAAGAAGAAGCAATTAACTCAAATGGGTTTCTTCAAAACCCAGTTGCGGTACTTGGATCCAATCCTCCTCCTGTCAAAAAGAAGAGAAACCTCCCAGGAAACCCAGATCCTGAGGCTGAAGTAATAGCCTTGTCTCCAAAGACTCTGATGGCCACCAACAGATTCTTGTGTGAAATATGTGGTAAGGGATTTCAGAGAGACCAAAACCTACAGCTGCACCGCCGTGGACACAACCTTCCATGGAAGCTCAAGCAAAGAACAAGCAAAGAGCCGAGGAAGCGCGTCTACGTGTGCCCGGAAAAGAGTTGCGTCCACCACCACCCGTCTAGGGCGCTCGGAGATCTGACCGGAATAAAGAAGCACTTCTGCCGCAAGCACGGCGAGAAGAAGTGGAAGTGTGAGAAGTGCTCCAAGCGGTACGCGGTGCAGTCGGATTGGAAAGCTCACTCAAAGACCTGTGGCACTAGGGAGTACAAATGTGACTGCGGAACTCTATTTTCACGGCGTGATAGCTTCATTACACACCGGGCCTTCTGTGATGCCTTAGCTGAAGAAACAGCTAGAGTAAATGCAGTATCCAACATCCACAACAATGCAATGCCCAGTAATATCAACTATCATCACTACATGGGAAATAATGCATCATCACTACTACTAGGACCTCCGAACATGGCCCAACTACAATTTTCTTCTATTTTTAAACCAATCTCCGGCAATGATACCCCTGACACCGTGAGCCAAAATACCCGCGGTCTATCTCTTTGGATGGGCCAAGGATCCAACGGCACCCACGAAGAAATGACTGTTAATAATCAGCATCATCACCATCAACTTGGGTCTGTGAGTTCATCCGCTGGTTCTATATTTGGTGATCCTAATAACATTAGTGTTTCATGTTCAGAGCCTCCTCCACCTTCTGATCATTATCAACTGAATTGGGTTCTTGGAAGTAACAACAAGCTTTCTCCATCGAACAATCCTCATCATCAAGATCAGTTAACAATCACAAGCACTAGTGCTGCTAACTCACTTCCTTCTTTGTACACACATCAAATGCCTTCAGCAAATATGTCAGCCACAGCTTTGTTGCAAAAGGCAGCCCAAATTGGTGCAACTTCAACTGACACGTCATCACTGCTTGGAAGTTTTGGATTGAAGTGCAACAACAACAATATTACTAGTAGTGCTAGTCAAGCAGTGACTCAAGTTCAAGATGGGAGCAAAGTTTGTGGACTCTATGGGCACTGTGGAGAACCCAGGAGCTCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001067 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0007568 GO:0008150 GO:0008356 GO:0009314 GO:0009416 GO:0009628 GO:0009648 GO:0009791 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010150 GO:0010228 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0022414 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032501 GO:0032502 GO:0040034 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044212 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0048366 GO:0048367 GO:0048506 GO:0048509 GO:0048510 GO:0048518 GO:0048522 GO:0048573 GO:0048608 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051301 GO:0060255 GO:0061458 GO:0065007 GO:0080090 GO:0090693 GO:0097159 GO:0099402 GO:0140110 GO:1901363 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-C2H2

Protein Analysis

431

Amino Acids

47.3

Weight (kDa)

9.08

Isoelectric Point (pI)

49.07

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
C2H2-2nd_BIRD-IDD	PF22996	101 - 135	6.7e-21	BIRD-IDD transcription factor, second C2H2 zinc finger
C2CH-3rd_BIRD-IDD	PF22995	139 - 163	4.2e-15	BIRD-IDD transcription factor, third C2HC zinc finger
C2CH-4th_BIRD-IDD	PF22992	166 - 205	1.4e-24	BIRD-IDD transcription factor, fourth C2HC zinc finger

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008927)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G03840 AT1G03840 AT5G44160 AT5G44160
fragaria_vesca	FvH4_6g26760 FvH4_6g26760 FvH4_6g26760
prunus_persica	Prupe.3G128100_v2.0.a1 Prupe.3G128100_v2.0.a1
rosa_chinensis	RchiOBHm_Chr0c19g0500141 RchiOBHm_Chr0c19g0500151 RchiOBHm_Chr2g0128541
rosa_laevigata	RLG00000018991
rosa_multiflora	Rmu_sc0002162.1_g000007
rosa_roxburghii	Rroxscaffold_2G00115690 Rroxscaffold_2G00116120
rosa_rugosa	Rorug02G0277800
rosa_samantha	Rh2AG329200 Rh2BG338900 Rh2CG315900 Rh2DG355800
rosa_wichuraiana	Rw2G026680

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	812
AccI	GTMKAC	1 cut(s)	312
AccII	CGCG	3 cut(s)	309, 449, 777
AciI	CCGC	9 cut(s)	74, 247, 397, 442, 449, 513, 775, 777, 879
AclWI	GGATC	6 cut(s)	78, 91, 128, 798, 811, 893
AcoI	YGGCCR	1 cut(s)	177
AcuI	CTGAAG	3 cut(s)	165, 597, 1071
AdeI	CACNNNGTG	1 cut(s)	533
AfaI	GTAC	4 cut(s)	78, 446, 500, 1070
AfiI	CCNNNNNNNGG	3 cut(s)	73, 355, 737
AflIII	ACRYGT	2 cut(s)	315, 1152
AgsI	TTSAA	4 cut(s)	62, 1146, 1183, 1238
AhlI	ACTAGT	2 cut(s)	1040, 1205
AjiI	CACGTC	1 cut(s)	1155
AjnI	CCWGG	2 cut(s)	121, 1283
AleI	CACNNNNGTG	1 cut(s)	249
AluBI	AGCT	9 cut(s)	241, 274, 470, 540, 575, 587, 988, 1109, 1290
AluI	AGCT	9 cut(s)	241, 274, 470, 540, 575, 587, 988, 1109, 1290
Alw21I	GWGCWC	2 cut(s)	437, 1292
Alw26I	GTCTC	2 cut(s)	165, 219
AlwI	GGATC	6 cut(s)	78, 91, 128, 798, 811, 893
AlwNI	CAGNNNCTG	1 cut(s)	137
AoxI	GGCC	4 cut(s)	177, 555, 699, 796
ApeKI	GCWGC	3 cut(s)	241, 1046, 1124
Asp700I	GAANNNNTTC	1 cut(s)	389
AspLEI	GCGC	2 cut(s)	309, 361
AspS9I	GGNCC	4 cut(s)	555, 686, 700, 796
AsuC2I	CCSGG	2 cut(s)	323, 554
AsuHPI	GGTGA	2 cut(s)	842, 908
AvaII	GGWCC	1 cut(s)	686
AxyI	CCTNAGG	1 cut(s)	138
BaeGI	GKGCMC	2 cut(s)	323, 1272
BalI	TGGCCA	1 cut(s)	179
BamHI	GGATCC	2 cut(s)	83, 803
BanI	GGYRCC	1 cut(s)	812
BanII	GRGCYC	1 cut(s)	1292
BarI	GAAGNNNNNNTAC	2 cut(s)	296, 328
Bbv12I	GWGCWC	2 cut(s)	437, 1292
BbvI	GCAGC	3 cut(s)	228, 1033, 1136
BccI	CCATC	5 cut(s)	169, 787, 861, 1003, 1235
BceAI	ACGGC	4 cut(s)	234, 421, 545, 826
BciT130I	CCWGG	2 cut(s)	123, 1285
BciVI	GTATCC	1 cut(s)	613
BclI	TGATCA	1 cut(s)	946
BcnI	CCSGG	2 cut(s)	323, 554
BcoDI	GTCTC	2 cut(s)	165, 219
BcuI	ACTAGT	2 cut(s)	1040, 1205
BfaI	CTAG	7 cut(s)	354, 492, 588, 683, 1041, 1206, 1215
BfmI	CTRYAG	1 cut(s)	236
BfoI	RGCGCY	1 cut(s)	362
BfuI	GTATCC	1 cut(s)	613
BglII	AGATCT	1 cut(s)	367
BisI	GCNGC	4 cut(s)	242, 397, 1047, 1125
BlsI	GCNGC	4 cut(s)	243, 398, 1048, 1126
Bme1390I	CCNGG	4 cut(s)	123, 323, 554, 1285
Bme18I	GGWCC	1 cut(s)	686
BmgBI	CACGTC	1 cut(s)	1155
BmgT120I	GGNCC	4 cut(s)	555, 686, 700, 796
BmiI	GGNNCC	3 cut(s)	85, 805, 814
BmrFI	CCNGG	4 cut(s)	123, 323, 554, 1285
BmrI	ACTGGG	2 cut(s)	62, 624
BmsI	GCATC	3 cut(s)	556, 677, 853
BmuI	ACTGGG	2 cut(s)	62, 624
BplI	GAGNNNNNCTC	2 cut(s)	419, 451
Bpu10I	CCTNAGC	1 cut(s)	571
BpuEI	CTTGAG	2 cut(s)	260, 1215
BpuMI	CCSGG	2 cut(s)	323, 554
BsaAI	YACGTR	1 cut(s)	316
BsaBI	GATNNNNATC	1 cut(s)	951
BsaI	GGTCTC	1 cut(s)	219
BsaJI	CCNNGG	7 cut(s)	121, 250, 266, 299, 775, 799, 1283
BsaWI	WCCGGW	1 cut(s)	374
Bsc4I	CCNNNNNNNGG	3 cut(s)	73, 355, 737
Bse1I	ACTGG	2 cut(s)	68, 630
Bse21I	CCTNAGG	1 cut(s)	138
Bse3DI	GCAATG	2 cut(s)	630, 748
Bse8I	GATNNNNATC	1 cut(s)	951
BseBI	CCWGG	2 cut(s)	123, 1285
BseDI	CCNNGG	7 cut(s)	121, 250, 266, 299, 775, 799, 1283
BseGI	GGATG	3 cut(s)	609, 798, 875
BseJI	GATNNNNATC	1 cut(s)	951
BseLI	CCNNNNNNNGG	3 cut(s)	73, 355, 737
BseMI	GCAATG	2 cut(s)	630, 748
BseMII	CTCAG	1 cut(s)	129
BseNI	ACTGG	2 cut(s)	68, 630
BseRI	GAGGAG	2 cut(s)	84, 924
BseSI	GKGCMC	2 cut(s)	323, 1272
BseXI	GCAGC	3 cut(s)	228, 1033, 1136
BsgI	GTGCAG	2 cut(s)	227, 473
Bsh1236I	CGCG	3 cut(s)	309, 449, 777
BshFI	GGCC	4 cut(s)	179, 557, 701, 798
BshNI	GGYRCC	1 cut(s)	812
BsiHKAI	GWGCWC	2 cut(s)	437, 1292
BsiSI	CCGG	4 cut(s)	323, 375, 553, 738
BslI	CCNNNNNNNGG	3 cut(s)	73, 355, 737
BsmAI	GTCTC	2 cut(s)	165, 219
BsnI	GGCC	4 cut(s)	179, 557, 701, 798
Bso31I	GGTCTC	1 cut(s)	219
Bsp1286I	GDGCHC	4 cut(s)	323, 437, 1272, 1292
Bsp1407I	TGTACA	1 cut(s)	1068
Bsp143I	GATC	8 cut(s)	12, 83, 133, 367, 803, 898, 946, 1018
Bsp19I	CCATGG	1 cut(s)	266
BspACI	CCGC	9 cut(s)	74, 247, 397, 442, 449, 513, 775, 777, 879
BspANI	GGCC	4 cut(s)	179, 557, 701, 798
BspCNI	CTCAG	1 cut(s)	130
BspFNI	CGCG	3 cut(s)	309, 449, 777
BspHI	TCATGA	2 cut(s)	25, 1292
BspLI	GGNNCC	3 cut(s)	85, 805, 814
BspPI	GGATC	6 cut(s)	78, 91, 128, 798, 811, 893
BspT107I	GGYRCC	1 cut(s)	812
BspTNI	GGTCTC	1 cut(s)	219
BsrDI	GCAATG	2 cut(s)	630, 748
BsrGI	TGTACA	1 cut(s)	1068
BsrI	ACTGG	2 cut(s)	68, 630
BssECI	CCNNGG	7 cut(s)	121, 250, 266, 299, 775, 799, 1283
BssMI	GATC	8 cut(s)	12, 83, 133, 367, 803, 898, 946, 1018
BssT1I	CCWWGG	2 cut(s)	266, 799
Bst2UI	CCWGG	2 cut(s)	123, 1285
Bst4CI	ACNGT	3 cut(s)	760, 832, 1274
Bst6I	CTCTTC	1 cut(s)	104
BstAUI	TGTACA	1 cut(s)	1068
BstBAI	YACGTR	1 cut(s)	316
BstC8I	GCNNGC	1 cut(s)	401
BstDEI	CTNAG	2 cut(s)	138, 571
BstDSI	CCRYGG	3 cut(s)	250, 266, 775
BstF5I	GGATG	3 cut(s)	609, 798, 875
BstFNI	CGCG	3 cut(s)	309, 449, 777
BstH2I	RGCGCY	1 cut(s)	362
BstHHI	GCGC	2 cut(s)	309, 361
BstKTI	GATC	8 cut(s)	15, 86, 136, 370, 806, 901, 949, 1021
BstMAI	GTCTC	2 cut(s)	165, 219
BstMBI	GATC	8 cut(s)	12, 83, 133, 367, 803, 898, 946, 1018
BstMWI	GCNNNNNNNGC	3 cut(s)	304, 405, 1220
BstNI	CCWGG	2 cut(s)	123, 1285
BstSCI	CCNGG	4 cut(s)	121, 321, 552, 1283
BstSFI	CTRYAG	1 cut(s)	236
BstSLI	GKGCMC	2 cut(s)	323, 1272
BstUI	CGCG	3 cut(s)	309, 449, 777
BstV1I	GCAGC	3 cut(s)	228, 1033, 1136
BstX2I	RGATCY	4 cut(s)	83, 133, 367, 803
BstXI	CCANNNNNNTGG	1 cut(s)	860
BstYI	RGATCY	4 cut(s)	83, 133, 367, 803
Bsu36I	CCTNAGG	1 cut(s)	138
BsuI	GTATCC	1 cut(s)	613
BsuRI	GGCC	4 cut(s)	179, 557, 701, 798
BtgI	CCRYGG	3 cut(s)	250, 266, 775
BtrI	CACGTC	1 cut(s)	1155
BtsCI	GGATG	3 cut(s)	609, 798, 875
BtsI	GCAGTG	2 cut(s)	1160, 1230
BtsIMutI	CAGTG	3 cut(s)	1160, 1230, 1270
Cac8I	GCNNGC	1 cut(s)	401
CaiI	CAGNNNCTG	1 cut(s)	137
CciI	TCATGA	2 cut(s)	25, 1292
CfoI	GCGC	2 cut(s)	309, 361
Cfr13I	GGNCC	4 cut(s)	555, 686, 700, 796
Cfr42I	CCGCGG	1 cut(s)	778
CseI	GACGC	2 cut(s)	298, 325
Csp6I	GTAC	4 cut(s)	77, 445, 499, 1069
CspCI	CAANNNNNGTGG	2 cut(s)	1237, 1272
CviAII	CATG	6 cut(s)	26, 267, 655, 697, 921, 1293
CviQI	GTAC	4 cut(s)	77, 445, 499, 1069
DdeI	CTNAG	2 cut(s)	138, 571
DpnI	GATC	8 cut(s)	14, 85, 135, 369, 805, 900, 948, 1020
DpnII	GATC	8 cut(s)	12, 83, 133, 367, 803, 898, 946, 1018
DraI	TTTAAA	1 cut(s)	727
DraIII	CACNNNGTG	1 cut(s)	533
EaeI	YGGCCR	1 cut(s)	177
Eam1104I	CTCTTC	1 cut(s)	104
EarI	CTCTTC	1 cut(s)	104
Ecl136II	GAGCTC	1 cut(s)	1290
Eco130I	CCWWGG	2 cut(s)	266, 799
Eco24I	GRGCYC	1 cut(s)	1292
Eco31I	GGTCTC	1 cut(s)	219
Eco47I	GGWCC	1 cut(s)	686
Eco53kI	GAGCTC	1 cut(s)	1290
Eco57I	CTGAAG	3 cut(s)	165, 597, 1071
Eco81I	CCTNAGG	1 cut(s)	138
EcoICRI	GAGCTC	1 cut(s)	1290
EcoO109I	RGGNCCY	1 cut(s)	686
EcoRII	CCWGG	2 cut(s)	121, 1283
EcoT14I	CCWWGG	2 cut(s)	266, 799
EcoT22I	ATGCAT	1 cut(s)	670
EcoT38I	GRGCYC	1 cut(s)	1292
ErhI	CCWWGG	2 cut(s)	266, 799
FaeI	CATG	6 cut(s)	29, 270, 658, 700, 924, 1296
FalI	AAGNNNNNCTT	2 cut(s)	374, 406
FatI	CATG	6 cut(s)	25, 266, 654, 696, 920, 1292
FauI	CCCGC	1 cut(s)	782
FbaI	TGATCA	1 cut(s)	946
FblI	GTMKAC	1 cut(s)	312
Fnu4HI	GCNGC	4 cut(s)	242, 397, 1047, 1125
FokI	GGATG	3 cut(s)	596, 805, 862
FriOI	GRGCYC	1 cut(s)	1292
Fsp4HI	GCNGC	4 cut(s)	242, 397, 1047, 1125
FspBI	CTAG	7 cut(s)	354, 492, 588, 683, 1041, 1206, 1215
GlaI	GCGC	2 cut(s)	308, 360
GluI	GCNGC	4 cut(s)	242, 397, 1047, 1125
HaeII	RGCGCY	1 cut(s)	362
HaeIII	GGCC	4 cut(s)	179, 557, 701, 798
HapII	CCGG	4 cut(s)	323, 375, 553, 738
HgaI	GACGC	2 cut(s)	298, 325
HhaI	GCGC	2 cut(s)	309, 361
Hin1II	CATG	6 cut(s)	29, 270, 658, 700, 924, 1296
Hin6I	GCGC	2 cut(s)	307, 359
HinP1I	GCGC	2 cut(s)	307, 359
HincII	GTYRAC	1 cut(s)	1026
HindII	GTYRAC	1 cut(s)	1026
HindIII	AAGCTT	1 cut(s)	986
HinfI	GANTC	4 cut(s)	169, 189, 1228, 1260
HpaI	GTTAAC	1 cut(s)	1026
HpaII	CCGG	4 cut(s)	323, 375, 553, 738
HphI	GGTGA	2 cut(s)	842, 908
Hpy166II	GTNNAC	6 cut(s)	254, 313, 340, 1026, 1071, 1259
Hpy188I	TCNGA	8 cut(s)	174, 222, 365, 372, 460, 693, 928, 946
Hpy188III	TCNNGA	5 cut(s)	26, 137, 1016, 1238, 1293
Hpy8I	GTNNAC	6 cut(s)	254, 313, 340, 1026, 1071, 1259
HpyAV	CCTTC	5 cut(s)	272, 568, 951, 1071, 1095
HpyCH4III	ACNGT	3 cut(s)	760, 832, 1274
HpyCH4IV	ACGT	2 cut(s)	315, 1154
HpyCH4V	TGCA	8 cut(s)	244, 454, 599, 623, 668, 1117, 1139, 1188
HpyF10VI	GCNNNNNNNGC	3 cut(s)	304, 405, 1220
HpyF3I	CTNAG	2 cut(s)	138, 571
HpySE526I	ACGT	2 cut(s)	315, 1154
Hsp92II	CATG	6 cut(s)	29, 270, 658, 700, 924, 1296
HspAI	GCGC	2 cut(s)	307, 359
Ksp22I	TGATCA	1 cut(s)	946
KspAI	GTTAAC	1 cut(s)	1026
KspI	CCGCGG	1 cut(s)	778
Kzo9I	GATC	8 cut(s)	12, 83, 133, 367, 803, 898, 946, 1018
LmnI	GCTCC	3 cut(s)	440, 1245, 1287
Lsp1109I	GCAGC	3 cut(s)	228, 1033, 1136
LweI	GCATC	3 cut(s)	556, 677, 853
MaeI	CTAG	7 cut(s)	354, 492, 588, 683, 1041, 1206, 1215
MaeII	ACGT	2 cut(s)	315, 1154
MaeIII	GTNAC	3 cut(s)	506, 977, 1225
MalI	GATC	8 cut(s)	14, 85, 135, 369, 805, 900, 948, 1020
MboI	GATC	8 cut(s)	12, 83, 133, 367, 803, 898, 946, 1018
MboII	GAAGA	9 cut(s)	22, 41, 44, 50, 121, 424, 590, 708, 833
MflI	RGATCY	4 cut(s)	83, 133, 367, 803
MhlI	GDGCHC	4 cut(s)	323, 437, 1272, 1292
MlsI	TGGCCA	1 cut(s)	179
MluCI	AATT	4 cut(s)	39, 710, 961, 1131
MluNI	TGGCCA	1 cut(s)	179
MlyI	GAGTC	3 cut(s)	163, 1222, 1254
MmeI	TCCRAC	3 cut(s)	438, 630, 831
MnlI	CCTC	9 cut(s)	102, 105, 128, 133, 294, 699, 942, 945, 1017
Mox20I	TGGCCA	1 cut(s)	179
Mph1103I	ATGCAT	1 cut(s)	670
MroXI	GAANNNNTTC	1 cut(s)	389
MscI	TGGCCA	1 cut(s)	179
MseI	TTAA	4 cut(s)	42, 726, 834, 1025
MslI	CAYNNNNRTG	2 cut(s)	249, 618
Msp20I	TGGCCA	1 cut(s)	179
MspA1I	CMGCKG	3 cut(s)	241, 777, 881
MspI	CCGG	4 cut(s)	323, 375, 553, 738
MspR9I	CCNGG	4 cut(s)	123, 323, 554, 1285
MvaI	CCWGG	2 cut(s)	123, 1285
MvnI	CGCG	3 cut(s)	309, 449, 777
MwoI	GCNNNNNNNGC	3 cut(s)	304, 405, 1220
NciI	CCSGG	2 cut(s)	323, 554
NcoI	CCATGG	1 cut(s)	266
NdeII	GATC	8 cut(s)	12, 83, 133, 367, 803, 898, 946, 1018
NlaIII	CATG	6 cut(s)	29, 270, 658, 700, 924, 1296
NlaIV	GGNNCC	3 cut(s)	85, 805, 814
NmeAIII	GCCGAG	1 cut(s)	324
NmuCI	GTSAC	2 cut(s)	506, 1225
NsiI	ATGCAT	1 cut(s)	670
OliI	CACNNNNGTG	1 cut(s)	249
PagI	TCATGA	2 cut(s)	25, 1292
PcsI	WCGNNNNNNNCGW	1 cut(s)	816
PdmI	GAANNNNTTC	1 cut(s)	389
PfeI	GAWTC	1 cut(s)	189
PkrI	GCNGC	4 cut(s)	243, 398, 1048, 1126
PleI	GAGTC	3 cut(s)	163, 1222, 1254
PpsI	GAGTC	3 cut(s)	163, 1222, 1254
Ppu21I	YACGTR	1 cut(s)	316
PpuMI	RGGWCCY	1 cut(s)	686
Psp124BI	GAGCTC	1 cut(s)	1292
Psp5II	RGGWCCY	1 cut(s)	686
Psp6I	CCWGG	2 cut(s)	121, 1283
PspGI	CCWGG	2 cut(s)	121, 1283
PspN4I	GGNNCC	3 cut(s)	85, 805, 814
PspPI	GGNCC	4 cut(s)	555, 686, 700, 796
PspPPI	RGGWCCY	1 cut(s)	686
PstNI	CAGNNNCTG	1 cut(s)	137
PsuI	RGATCY	4 cut(s)	83, 133, 367, 803
PvuII	CAGCTG	1 cut(s)	241
RsaI	GTAC	4 cut(s)	78, 446, 500, 1070
RsaNI	GTAC	4 cut(s)	77, 445, 499, 1069
RseI	CAYNNNNRTG	2 cut(s)	249, 618
SacI	GAGCTC	1 cut(s)	1292
SacII	CCGCGG	1 cut(s)	778
SaqAI	TTAA	4 cut(s)	42, 726, 834, 1025
SatI	GCNGC	4 cut(s)	242, 397, 1047, 1125
Sau3AI	GATC	8 cut(s)	12, 83, 133, 367, 803, 898, 946, 1018
Sau96I	GGNCC	4 cut(s)	555, 686, 700, 796
SchI	GAGTC	3 cut(s)	163, 1222, 1254
ScrFI	CCNGG	4 cut(s)	123, 323, 554, 1285
SduI	GDGCHC	4 cut(s)	323, 437, 1272, 1292
SfaNI	GCATC	3 cut(s)	556, 677, 853
SfcI	CTRYAG	1 cut(s)	236
Sfr303I	CCGCGG	1 cut(s)	778
SgrBI	CCGCGG	1 cut(s)	778
SinI	GGWCC	1 cut(s)	686
SmiMI	CAYNNNNRTG	2 cut(s)	249, 618
SmlI	CTYRAG	2 cut(s)	275, 1230
SmoI	CTYRAG	2 cut(s)	275, 1230
SpeI	ACTAGT	2 cut(s)	1040, 1205
Sse9I	AATT	4 cut(s)	39, 710, 961, 1131
SsiI	CCGC	9 cut(s)	74, 247, 397, 442, 449, 513, 775, 777, 879
SspI	AATATT	1 cut(s)	1201
SspMI	CTAG	7 cut(s)	354, 492, 588, 683, 1041, 1206, 1215
SstI	GAGCTC	1 cut(s)	1292
StyD4I	CCNGG	4 cut(s)	121, 321, 552, 1283
StyI	CCWWGG	2 cut(s)	266, 799
TaaI	ACNGT	3 cut(s)	760, 832, 1274
TaiI	ACGT	2 cut(s)	318, 1157
TaqI	TCGA	1 cut(s)	998
TasI	AATT	4 cut(s)	39, 710, 961, 1131
TatI	WGTACW	2 cut(s)	498, 1068
TauI	GCSGC	1 cut(s)	399
TfiI	GAWTC	1 cut(s)	189
Tru1I	TTAA	4 cut(s)	42, 726, 834, 1025
Tru9I	TTAA	4 cut(s)	42, 726, 834, 1025
TscAI	CASTG	3 cut(s)	1167, 1230, 1277
TseFI	GTSAC	2 cut(s)	506, 1225
TseI	GCWGC	3 cut(s)	241, 1046, 1124
Tsp45I	GTSAC	2 cut(s)	506, 1225
TspDTI	ATGAA	4 cut(s)	42, 532, 864, 909
TspRI	CASTG	3 cut(s)	1167, 1230, 1277
VpaK11BI	GGWCC	1 cut(s)	686
XmiI	GTMKAC	1 cut(s)	312
XmnI	GAANNNNTTC	1 cut(s)	389
XspI	CTAG	7 cut(s)	354, 492, 588, 683, 1041, 1206, 1215
Zsp2I	ATGCAT	1 cut(s)	670

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.