Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0008927

Physical Location & Seq

Genomic Coordinates Forward (+)

43773862 .. 43776462

Gene Structure 2601 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ50030

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1452 bp

ATGTTGGAGAAGATCAATATGGCTCATGAAGAAGAAGCAATTAACTCAAATGGGTTTCTTCAAAACCCAGTTGCGGTACTTGGATCCAATCCTCCTCCTGTCAAAAAGAAGAGAAACCTCCCAGGAAACCCAGGCAAGTTTAATCTTCATCCTGAGGCTGAAGTAATAGCCTTGTCTCCAAAGACTCTGATGGCCACCAACAGATTCTTGTGTGAAATATGTGGTAAGGGATTTCAGAGAGACCAAAACCTACAGCTGCACCGCCGTGGACACAACCTTCCATGGAAGCTCAAGCAAAGAACAAGCAAAGAGCCGAGGAAGCGCGTCTACGTGTGCCCGGAAAAGAGTTGCGTCCACCACCACCCGTCTAGGGCGCTCGGAGATCTGACCGGAATAAAGAAGCACTTCTGCCGCAAGCATGGCGAGAAGAAGTGGAAGTGTGAGAAGTGCTCCAAGCGGTACGCGGTGCAGTCGGATTGGAAAGCTCACTCAAAGACCTGTGGCACTAGGGAGTACAAATGTGACTGCGGAACTCTATTTTCACGGCGTGATAGCTTCATCACACACCGGGCCTTCTGTGATGCCTTAGCTGAAGAAACAGCTAGAGTAAATGCAGTATCCAACATCCACAACAATGCAATGCCCAGTAATATCAACTATCATCACTACATGGGAAATAATGCATCTTCACTACTACTAGGACCTCCGAACATGCCCCAACTACAATTTTCTTCTATTTTTAAACCAATCTCCAGCAATGATACCCCTGACACCGTGAGCCAAAATACCCGCGGTCTATCTCTTTGGATGGGACAGGGATCCAACAGCACCCACGAAGAAATGACTGTTAATAATCAGCATCATCACCATCAACTTGGGTCTGTGAGTTCATCAGCTGGTTCAATATTTGGTGATCCTAATAACATTAGTGTTTCGTGTTCAGTGCCTCCTCCGCCTTCTGATCATTATCAACTGAATTGGGTTCTTGGAAGTAATAACAAGCTTTCTACATCAAACAATGCTCATCATCAAGATCAGTTAACAATCACAAGCACTAGTGCTGCTAGCTCACTTCCTTCTTTGTACACACATCAAACGCCTTCAGCAAATATGTCAGCCACAGCTTTGTTGCAAAAGGCAGCCCAAATTGGTGCAACTTCAACTGACACGTCATCACTGCTTGGAAGTTTTGGATTGAAGTGCAACAACAACAATATTACTAGTAGTGCTAGTCAAGCAGTGATTCAAGTTCAAGATGGGAGCAAAGTTTGTGGACTCTATGGCACTGTGGAGAACCCAGGAGCTCATGATCATCTACTGCACATGCATCAAGCGAAACGCCGCCACATACAGAGCGAAGAGAGCGCCGGAGGAGGGCAGACTAGGGATTTCCTTGGTGTTGGCGTGCAGACCATTTGCCACTCTTCACCAATCAATGGATATTGGGTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001067 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0007568 GO:0008150 GO:0008356 GO:0009314 GO:0009416 GO:0009628 GO:0009648 GO:0009791 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010150 GO:0010228 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0022414 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032501 GO:0032502 GO:0040034 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044212 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0048366 GO:0048367 GO:0048506 GO:0048509 GO:0048510 GO:0048518 GO:0048522 GO:0048573 GO:0048608 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051301 GO:0060255 GO:0061458 GO:0065007 GO:0080090 GO:0090693 GO:0097159 GO:0099402 GO:0140110 GO:1901363 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-C2H2

Protein Analysis

483

Amino Acids

53.06

Weight (kDa)

9.18

Isoelectric Point (pI)

50.94

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
C2H2-2nd_BIRD-IDD	PF22996	106 - 140	7.8e-21	BIRD-IDD transcription factor, second C2H2 zinc finger
C2CH-3rd_BIRD-IDD	PF22995	144 - 168	4.8e-15	BIRD-IDD transcription factor, third C2HC zinc finger
C2CH-4th_BIRD-IDD	PF22992	171 - 210	1.7e-24	BIRD-IDD transcription factor, fourth C2HC zinc finger

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0008927)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G03840 AT1G03840 AT5G44160 AT5G44160
fragaria_vesca	FvH4_6g26760 FvH4_6g26760 FvH4_6g26760
prunus_persica	Prupe.3G128100_v2.0.a1 Prupe.3G128100_v2.0.a1
rosa_chinensis	RchiOBHm_Chr0c19g0500141 RchiOBHm_Chr0c19g0500151 RchiOBHm_Chr2g0128541
rosa_laevigata	RLG00000018991
rosa_multiflora	Rmu_sc0002162.1_g000007
rosa_roxburghii	Rroxscaffold_2G00115690 Rroxscaffold_2G00116120
rosa_rugosa	Rorug02G0277800
rosa_samantha	Rh2AG329200 Rh2BG338900 Rh2CG315900 Rh2DG355800
rosa_wichuraiana	Rw2G026680

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	1436
AccI	GTMKAC	1 cut(s)	327
AccII	CGCG	3 cut(s)	324, 464, 792
AclWI	GGATC	5 cut(s)	78, 91, 813, 826, 908
AcoI	YGGCCR	1 cut(s)	192
AcuI	CTGAAG	3 cut(s)	180, 612, 1086
AdeI	CACNNNGTG	1 cut(s)	548
AfaI	GTAC	4 cut(s)	78, 461, 515, 1085
AfiI	CCNNNNNNNGG	4 cut(s)	73, 370, 1374, 1436
AflIII	ACRYGT	2 cut(s)	330, 1167
AgsI	TTSAA	6 cut(s)	62, 903, 1161, 1198, 1247, 1253
AhlI	ACTAGT	2 cut(s)	1055, 1220
AjiI	CACGTC	1 cut(s)	1170
AjnI	CCWGG	3 cut(s)	121, 130, 1297
AleI	CACNNNNGTG	1 cut(s)	264
Alw21I	GWGCWC	2 cut(s)	452, 1306
Alw26I	GTCTC	2 cut(s)	180, 234
AlwI	GGATC	5 cut(s)	78, 91, 813, 826, 908
AoxI	GGCC	2 cut(s)	192, 570
ApeKI	GCWGC	3 cut(s)	256, 1061, 1139
Asp700I	GAANNNNTTC	1 cut(s)	404
AspLEI	GCGC	3 cut(s)	324, 376, 1367
AspS9I	GGNCC	2 cut(s)	570, 701
AsuC2I	CCSGG	2 cut(s)	338, 569
AsuHPI	GGTGA	3 cut(s)	857, 923, 1419
AsuNHI	GCTAGC	1 cut(s)	1064
AvaII	GGWCC	1 cut(s)	701
AxyI	CCTNAGG	1 cut(s)	153
BaeGI	GKGCMC	1 cut(s)	338
BalI	TGGCCA	1 cut(s)	194
BamHI	GGATCC	2 cut(s)	83, 818
BanII	GRGCYC	1 cut(s)	1306
BarI	GAAGNNNNNNTAC	2 cut(s)	311, 343
Bbv12I	GWGCWC	2 cut(s)	452, 1306
BbvI	GCAGC	3 cut(s)	243, 1048, 1151
BccI	CCATC	4 cut(s)	184, 802, 876, 1250
BceAI	ACGGC	2 cut(s)	249, 560
BciT130I	CCWGG	3 cut(s)	123, 132, 1299
BciVI	GTATCC	1 cut(s)	628
BclI	TGATCA	2 cut(s)	961, 1309
BcnI	CCSGG	2 cut(s)	338, 569
BcoDI	GTCTC	2 cut(s)	180, 234
BcuI	ACTAGT	2 cut(s)	1055, 1220
BfaI	CTAG	9 cut(s)	369, 507, 603, 698, 1056, 1065, 1221, 1230, 1383
BfmI	CTRYAG	1 cut(s)	251
BfoI	RGCGCY	2 cut(s)	377, 1368
BfuI	GTATCC	1 cut(s)	628
BglII	AGATCT	1 cut(s)	382
BisI	GCNGC	5 cut(s)	257, 412, 1062, 1140, 1342
BlsI	GCNGC	5 cut(s)	258, 413, 1063, 1141, 1343
Bme1390I	CCNGG	5 cut(s)	123, 132, 338, 569, 1299
Bme18I	GGWCC	1 cut(s)	701
BmgBI	CACGTC	1 cut(s)	1170
BmgT120I	GGNCC	2 cut(s)	570, 701
BmiI	GGNNCC	2 cut(s)	85, 820
BmrFI	CCNGG	5 cut(s)	123, 132, 338, 569, 1299
BmrI	ACTGGG	2 cut(s)	62, 639
BmsI	GCATC	4 cut(s)	571, 692, 868, 1336
BmtI	GCTAGC	1 cut(s)	1068
BmuI	ACTGGG	2 cut(s)	62, 639
BplI	GAGNNNNNCTC	2 cut(s)	434, 466
BpmI	CTGGAG	1 cut(s)	736
Bpu10I	CCTNAGC	1 cut(s)	586
BpuEI	CTTGAG	1 cut(s)	275
BpuMI	CCSGG	2 cut(s)	338, 569
BsaAI	YACGTR	1 cut(s)	331
BsaBI	GATNNNNATC	1 cut(s)	966
BsaI	GGTCTC	1 cut(s)	234
BsaJI	CCNNGG	8 cut(s)	121, 130, 265, 281, 314, 790, 1297, 1393
BsaWI	WCCGGW	1 cut(s)	389
Bsc4I	CCNNNNNNNGG	4 cut(s)	73, 370, 1374, 1436
Bse1I	ACTGG	2 cut(s)	68, 645
Bse21I	CCTNAGG	1 cut(s)	153
Bse3DI	GCAATG	2 cut(s)	645, 763
Bse8I	GATNNNNATC	1 cut(s)	966
BseBI	CCWGG	3 cut(s)	123, 132, 1299
BseDI	CCNNGG	8 cut(s)	121, 130, 265, 281, 314, 790, 1297, 1393
BseGI	GGATG	3 cut(s)	148, 624, 813
BseJI	GATNNNNATC	1 cut(s)	966
BseLI	CCNNNNNNNGG	4 cut(s)	73, 370, 1374, 1436
BseMI	GCAATG	2 cut(s)	645, 763
BseMII	CTCAG	1 cut(s)	144
BseNI	ACTGG	2 cut(s)	68, 645
BseRI	GAGGAG	3 cut(s)	84, 939, 1386
BseSI	GKGCMC	1 cut(s)	338
BseXI	GCAGC	3 cut(s)	243, 1048, 1151
BsgI	GTGCAG	4 cut(s)	242, 488, 1304, 1427
Bsh1236I	CGCG	3 cut(s)	324, 464, 792
BshFI	GGCC	2 cut(s)	194, 572
BsiHKAI	GWGCWC	2 cut(s)	452, 1306
BsiSI	CCGG	4 cut(s)	338, 390, 568, 1368
BslFI	GGGAC	1 cut(s)	825
BslI	CCNNNNNNNGG	4 cut(s)	73, 370, 1374, 1436
BsmAI	GTCTC	2 cut(s)	180, 234
BsmFI	GGGAC	1 cut(s)	825
BsnI	GGCC	2 cut(s)	194, 572
Bso31I	GGTCTC	1 cut(s)	234
Bsp1286I	GDGCHC	3 cut(s)	338, 452, 1306
Bsp1407I	TGTACA	1 cut(s)	1083
Bsp143I	GATC	8 cut(s)	12, 83, 382, 818, 913, 961, 1033, 1309
Bsp19I	CCATGG	1 cut(s)	281
BspANI	GGCC	2 cut(s)	194, 572
BspCNI	CTCAG	1 cut(s)	145
BspFNI	CGCG	3 cut(s)	324, 464, 792
BspHI	TCATGA	2 cut(s)	25, 1306
BspLI	GGNNCC	2 cut(s)	85, 820
BspOI	GCTAGC	1 cut(s)	1068
BspPI	GGATC	5 cut(s)	78, 91, 813, 826, 908
BspTNI	GGTCTC	1 cut(s)	234
BsrDI	GCAATG	2 cut(s)	645, 763
BsrGI	TGTACA	1 cut(s)	1083
BsrI	ACTGG	2 cut(s)	68, 645
BssECI	CCNNGG	8 cut(s)	121, 130, 265, 281, 314, 790, 1297, 1393
BssMI	GATC	8 cut(s)	12, 83, 382, 818, 913, 961, 1033, 1309
BssT1I	CCWWGG	2 cut(s)	281, 1393
Bst2UI	CCWGG	3 cut(s)	123, 132, 1299
Bst4CI	ACNGT	3 cut(s)	775, 847, 1288
Bst6I	CTCTTC	3 cut(s)	104, 1353, 1429
BstAUI	TGTACA	1 cut(s)	1083
BstBAI	YACGTR	1 cut(s)	331
BstC8I	GCNNGC	3 cut(s)	416, 1066, 1406
BstDEI	CTNAG	2 cut(s)	153, 586
BstDSI	CCRYGG	3 cut(s)	265, 281, 790
BstF5I	GGATG	3 cut(s)	148, 624, 813
BstFNI	CGCG	3 cut(s)	324, 464, 792
BstH2I	RGCGCY	2 cut(s)	377, 1368
BstHHI	GCGC	3 cut(s)	324, 376, 1367
BstKTI	GATC	8 cut(s)	15, 86, 385, 821, 916, 964, 1036, 1312
BstMAI	GTCTC	2 cut(s)	180, 234
BstMBI	GATC	8 cut(s)	12, 83, 382, 818, 913, 961, 1033, 1309
BstMWI	GCNNNNNNNGC	5 cut(s)	319, 420, 952, 1235, 1362
BstNI	CCWGG	3 cut(s)	123, 132, 1299
BstNSI	RCATGY	2 cut(s)	715, 1327
BstSCI	CCNGG	5 cut(s)	121, 130, 336, 567, 1297
BstSFI	CTRYAG	1 cut(s)	251
BstSLI	GKGCMC	1 cut(s)	338
BstUI	CGCG	3 cut(s)	324, 464, 792
BstV1I	GCAGC	3 cut(s)	243, 1048, 1151
BstX2I	RGATCY	3 cut(s)	83, 382, 818
BstXI	CCANNNNNNTGG	1 cut(s)	875
BstYI	RGATCY	3 cut(s)	83, 382, 818
Bsu36I	CCTNAGG	1 cut(s)	153
BsuI	GTATCC	1 cut(s)	628
BsuRI	GGCC	2 cut(s)	194, 572
BtgI	CCRYGG	3 cut(s)	265, 281, 790
BtrI	CACGTC	1 cut(s)	1170
BtsCI	GGATG	3 cut(s)	148, 624, 813
BtsI	GCAGTG	2 cut(s)	1175, 1245
BtsIMutI	CAGTG	4 cut(s)	948, 1175, 1245, 1284
Cac8I	GCNNGC	3 cut(s)	416, 1066, 1406
CciI	TCATGA	2 cut(s)	25, 1306
CfoI	GCGC	3 cut(s)	324, 376, 1367
Cfr13I	GGNCC	2 cut(s)	570, 701
Cfr42I	CCGCGG	1 cut(s)	793
CseI	GACGC	2 cut(s)	313, 340
Csp6I	GTAC	4 cut(s)	77, 460, 514, 1084
CspCI	CAANNNNNGTGG	2 cut(s)	1252, 1287
CviAII	CATG	7 cut(s)	26, 282, 419, 670, 712, 1307, 1324
CviQI	GTAC	4 cut(s)	77, 460, 514, 1084
DdeI	CTNAG	2 cut(s)	153, 586
DpnI	GATC	8 cut(s)	14, 85, 384, 820, 915, 963, 1035, 1311
DpnII	GATC	8 cut(s)	12, 83, 382, 818, 913, 961, 1033, 1309
DraI	TTTAAA	1 cut(s)	742
DraIII	CACNNNGTG	1 cut(s)	548
EaeI	YGGCCR	1 cut(s)	192
Eam1104I	CTCTTC	3 cut(s)	104, 1353, 1429
EarI	CTCTTC	3 cut(s)	104, 1353, 1429
EciI	GGCGGA	1 cut(s)	942
Ecl136II	GAGCTC	1 cut(s)	1304
Eco130I	CCWWGG	2 cut(s)	281, 1393
Eco24I	GRGCYC	1 cut(s)	1306
Eco31I	GGTCTC	1 cut(s)	234
Eco47I	GGWCC	1 cut(s)	701
Eco53kI	GAGCTC	1 cut(s)	1304
Eco57I	CTGAAG	3 cut(s)	180, 612, 1086
Eco81I	CCTNAGG	1 cut(s)	153
EcoICRI	GAGCTC	1 cut(s)	1304
EcoO109I	RGGNCCY	1 cut(s)	701
EcoRII	CCWGG	3 cut(s)	121, 130, 1297
EcoT14I	CCWWGG	2 cut(s)	281, 1393
EcoT22I	ATGCAT	2 cut(s)	685, 1329
EcoT38I	GRGCYC	1 cut(s)	1306
ErhI	CCWWGG	2 cut(s)	281, 1393
FaeI	CATG	7 cut(s)	29, 285, 422, 673, 715, 1310, 1327
FalI	AAGNNNNNCTT	2 cut(s)	389, 421
FaqI	GGGAC	1 cut(s)	825
FatI	CATG	7 cut(s)	25, 281, 418, 669, 711, 1306, 1323
FauI	CCCGC	1 cut(s)	797
FbaI	TGATCA	2 cut(s)	961, 1309
FblI	GTMKAC	1 cut(s)	327
Fnu4HI	GCNGC	5 cut(s)	257, 412, 1062, 1140, 1342
FokI	GGATG	3 cut(s)	135, 611, 820
FriOI	GRGCYC	1 cut(s)	1306
Fsp4HI	GCNGC	5 cut(s)	257, 412, 1062, 1140, 1342
FspBI	CTAG	9 cut(s)	369, 507, 603, 698, 1056, 1065, 1221, 1230, 1383
GlaI	GCGC	3 cut(s)	323, 375, 1366
GluI	GCNGC	5 cut(s)	257, 412, 1062, 1140, 1342
GsuI	CTGGAG	1 cut(s)	736
HaeII	RGCGCY	2 cut(s)	377, 1368
HaeIII	GGCC	2 cut(s)	194, 572
HapII	CCGG	4 cut(s)	338, 390, 568, 1368
HgaI	GACGC	2 cut(s)	313, 340
HhaI	GCGC	3 cut(s)	324, 376, 1367
Hin1II	CATG	7 cut(s)	29, 285, 422, 673, 715, 1310, 1327
Hin6I	GCGC	3 cut(s)	322, 374, 1365
HinP1I	GCGC	3 cut(s)	322, 374, 1365
HincII	GTYRAC	1 cut(s)	1041
HindII	GTYRAC	1 cut(s)	1041
HindIII	AAGCTT	1 cut(s)	1001
HinfI	GANTC	4 cut(s)	184, 204, 1243, 1275
HpaI	GTTAAC	1 cut(s)	1041
HpaII	CCGG	4 cut(s)	338, 390, 568, 1368
HphI	GGTGA	3 cut(s)	857, 923, 1419
Hpy166II	GTNNAC	6 cut(s)	269, 328, 355, 1041, 1086, 1274
Hpy188I	TCNGA	7 cut(s)	189, 237, 380, 387, 475, 708, 961
Hpy188III	TCNNGA	5 cut(s)	26, 152, 1031, 1253, 1307
Hpy8I	GTNNAC	6 cut(s)	269, 328, 355, 1041, 1086, 1274
HpyAV	CCTTC	5 cut(s)	287, 583, 966, 1086, 1110
HpyCH4III	ACNGT	3 cut(s)	775, 847, 1288
HpyCH4IV	ACGT	2 cut(s)	330, 1169
HpyF10VI	GCNNNNNNNGC	5 cut(s)	319, 420, 952, 1235, 1362
HpyF3I	CTNAG	2 cut(s)	153, 586
HpySE526I	ACGT	2 cut(s)	330, 1169
Hsp92II	CATG	7 cut(s)	29, 285, 422, 673, 715, 1310, 1327
HspAI	GCGC	3 cut(s)	322, 374, 1365
Ksp22I	TGATCA	2 cut(s)	961, 1309
KspAI	GTTAAC	1 cut(s)	1041
KspI	CCGCGG	1 cut(s)	793
Kzo9I	GATC	8 cut(s)	12, 83, 382, 818, 913, 961, 1033, 1309
LmnI	GCTCC	3 cut(s)	455, 1260, 1301
Lsp1109I	GCAGC	3 cut(s)	243, 1048, 1151
LweI	GCATC	4 cut(s)	571, 692, 868, 1336
MaeI	CTAG	9 cut(s)	369, 507, 603, 698, 1056, 1065, 1221, 1230, 1383
MaeII	ACGT	2 cut(s)	330, 1169
MaeIII	GTNAC	1 cut(s)	521
MalI	GATC	8 cut(s)	14, 85, 384, 820, 915, 963, 1035, 1311
MboI	GATC	8 cut(s)	12, 83, 382, 818, 913, 961, 1033, 1309
MflI	RGATCY	3 cut(s)	83, 382, 818
MhlI	GDGCHC	3 cut(s)	338, 452, 1306
MlsI	TGGCCA	1 cut(s)	194
MluCI	AATT	4 cut(s)	39, 725, 976, 1146
MluNI	TGGCCA	1 cut(s)	194
MlyI	GAGTC	2 cut(s)	178, 1269
MmeI	TCCRAC	3 cut(s)	453, 645, 846
Mox20I	TGGCCA	1 cut(s)	194
Mph1103I	ATGCAT	2 cut(s)	685, 1329
MroXI	GAANNNNTTC	1 cut(s)	404
MscI	TGGCCA	1 cut(s)	194
MseI	TTAA	5 cut(s)	42, 141, 741, 849, 1040
MslI	CAYNNNNRTG	2 cut(s)	264, 633
Msp20I	TGGCCA	1 cut(s)	194
MspA1I	CMGCKG	3 cut(s)	256, 792, 896
MspI	CCGG	4 cut(s)	338, 390, 568, 1368
MspR9I	CCNGG	5 cut(s)	123, 132, 338, 569, 1299
MvaI	CCWGG	3 cut(s)	123, 132, 1299
MvnI	CGCG	3 cut(s)	324, 464, 792
MwoI	GCNNNNNNNGC	5 cut(s)	319, 420, 952, 1235, 1362
NciI	CCSGG	2 cut(s)	338, 569
NcoI	CCATGG	1 cut(s)	281
NdeII	GATC	8 cut(s)	12, 83, 382, 818, 913, 961, 1033, 1309
NheI	GCTAGC	1 cut(s)	1064
NlaIII	CATG	7 cut(s)	29, 285, 422, 673, 715, 1310, 1327
NlaIV	GGNNCC	2 cut(s)	85, 820
NmeAIII	GCCGAG	1 cut(s)	339
NmuCI	GTSAC	1 cut(s)	521
NsiI	ATGCAT	2 cut(s)	685, 1329
NspI	RCATGY	2 cut(s)	715, 1327
OliI	CACNNNNGTG	1 cut(s)	264
PagI	TCATGA	2 cut(s)	25, 1306
PdmI	GAANNNNTTC	1 cut(s)	404
PfeI	GAWTC	2 cut(s)	204, 1243
PflMI	CCANNNNNTGG	1 cut(s)	1436
PkrI	GCNGC	5 cut(s)	258, 413, 1063, 1141, 1343
PleI	GAGTC	2 cut(s)	178, 1269
PpsI	GAGTC	2 cut(s)	178, 1269
Ppu21I	YACGTR	1 cut(s)	331
PpuMI	RGGWCCY	1 cut(s)	701
Psp124BI	GAGCTC	1 cut(s)	1306
Psp5II	RGGWCCY	1 cut(s)	701
Psp6I	CCWGG	3 cut(s)	121, 130, 1297
PspGI	CCWGG	3 cut(s)	121, 130, 1297
PspN4I	GGNNCC	2 cut(s)	85, 820
PspPI	GGNCC	2 cut(s)	570, 701
PspPPI	RGGWCCY	1 cut(s)	701
PsuI	RGATCY	3 cut(s)	83, 382, 818
PvuII	CAGCTG	2 cut(s)	256, 896
RsaI	GTAC	4 cut(s)	78, 461, 515, 1085
RsaNI	GTAC	4 cut(s)	77, 460, 514, 1084
RseI	CAYNNNNRTG	2 cut(s)	264, 633
SacI	GAGCTC	1 cut(s)	1306
SacII	CCGCGG	1 cut(s)	793
SaqAI	TTAA	5 cut(s)	42, 141, 741, 849, 1040
SatI	GCNGC	5 cut(s)	257, 412, 1062, 1140, 1342
Sau3AI	GATC	8 cut(s)	12, 83, 382, 818, 913, 961, 1033, 1309
Sau96I	GGNCC	2 cut(s)	570, 701
SchI	GAGTC	2 cut(s)	178, 1269
ScrFI	CCNGG	5 cut(s)	123, 132, 338, 569, 1299
SduI	GDGCHC	3 cut(s)	338, 452, 1306
SfaNI	GCATC	4 cut(s)	571, 692, 868, 1336
SfcI	CTRYAG	1 cut(s)	251
Sfr303I	CCGCGG	1 cut(s)	793
SgrBI	CCGCGG	1 cut(s)	793
SinI	GGWCC	1 cut(s)	701
SmiMI	CAYNNNNRTG	2 cut(s)	264, 633
SmlI	CTYRAG	1 cut(s)	290
SmoI	CTYRAG	1 cut(s)	290
SpeI	ACTAGT	2 cut(s)	1055, 1220
Sse9I	AATT	4 cut(s)	39, 725, 976, 1146
SspI	AATATT	2 cut(s)	906, 1216
SspMI	CTAG	9 cut(s)	369, 507, 603, 698, 1056, 1065, 1221, 1230, 1383
SstI	GAGCTC	1 cut(s)	1306
StyD4I	CCNGG	5 cut(s)	121, 130, 336, 567, 1297
StyI	CCWWGG	2 cut(s)	281, 1393
TaaI	ACNGT	3 cut(s)	775, 847, 1288
TaiI	ACGT	2 cut(s)	333, 1172
TasI	AATT	4 cut(s)	39, 725, 976, 1146
TatI	WGTACW	2 cut(s)	513, 1083
TauI	GCSGC	2 cut(s)	414, 1344
TfiI	GAWTC	2 cut(s)	204, 1243
Tru1I	TTAA	5 cut(s)	42, 141, 741, 849, 1040
Tru9I	TTAA	5 cut(s)	42, 141, 741, 849, 1040
TscAI	CASTG	4 cut(s)	948, 1182, 1245, 1291
TseFI	GTSAC	1 cut(s)	521
TseI	GCWGC	3 cut(s)	256, 1061, 1139
Tsp45I	GTSAC	1 cut(s)	521
TspDTI	ATGAA	4 cut(s)	42, 137, 547, 879
TspRI	CASTG	4 cut(s)	948, 1182, 1245, 1291
Van91I	CCANNNNNTGG	1 cut(s)	1436
VpaK11BI	GGWCC	1 cut(s)	701
XceI	RCATGY	2 cut(s)	715, 1327
XmiI	GTMKAC	1 cut(s)	327
XmnI	GAANNNNTTC	1 cut(s)	404
XspI	CTAG	9 cut(s)	369, 507, 603, 698, 1056, 1065, 1221, 1230, 1383
Zsp2I	ATGCAT	2 cut(s)	685, 1329

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.