Prupe.3G128100_v2.0.a1

Zinc finger protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
Physical Location & Seq
Reverse (-)
12722929 .. 12725141
2213 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G128100.1

Sequence Viewer

Length: 1398 bp
ATGGCTTTAAATGAAGAATCAATTCCACCAATGAATGGGTTTGTTCAAGACCCAGCTGCTGGATCCATTAGCCCTCCTCCTCCTCCTCCTGCGAAAAAGAAGAGAAACCTCCCAGGAAACCCAGATCCTGAAGCTGAAGTAATAGCCTTGTCTCCGAAGACTCTGATGGCCACCAACAGATTCTTGTGCGAAATATGTGGCAAGGGCTTCCAAAGAGATCAAAACCTGCAGCTCCATCGTCGCGGCCACAACCTTCCATGGAAGCTGAAGCAGAGAACAAACAAAGAACCGAGGAAGCGCGTGTATGTGTGCCCTGAAAAGAGTTGCGTCCACCACCACCCATCCCGGGCTCTCGGAGATCTGACGGGCATCAAGAAACACTTCTGCCGGAAACATGGGGAGAAGAAGTGGAAGTGTGACAAGTGCTCCAAGCGATATGCCGTGCAGTCAGACTGGAAGGCTCACTCAAAGACCTGCGGCACTCGGGAGTACAAATGTGACTGTGGGACTCTATTTTCACGGCGTGATAGCTTCATCACTCACCGGGCCTTTTGCGATGCGTTGGCTGAAGAAACGGCTAGAGTAAACGCAGCATCCAATATTAACAACATTCCGATGGGTGGCAATATCAATTATCAGTACATGGGATACTCAATCGGAGCAGTAGCAGGGCCGAATAATAACATCACGGCACAGCAATATTTTTCTTCCATTTTCAAGCCAATGATCTCAACCCCTAACAATATTGATGATGAGGCATCCCGCGGGATGTCTATATGGATGATGGGCGGCAATAACAATTACAATAATAATAAGAATCATGATCATCATCGTCATTGTCCTCCACCGTCGGATTATGATCAGATAAATAATTGGGTTGTTGGAAATAAGCAGCTGATTTCATCACCATCACCTTATTCAATCTCAAACAGCAATGCTCCTCATCATCAAGAAAGCATTACTTGTACTAGCACTACTAGTAGTAGTTGTTCTAGTTCATCGCTTGCTTTAATTAGCAATAATATAATAAGTGATGTTCCTTCCTTTTACAGCAGTAAAATGTCAGCCACGGCTTTGCTGCAGAAAGCCGCTCAAATTGGGTCAACAACTTCGAGTGAGGCGCCATTGCTGGGGAGTTTTGGGATGAATAATATCAGCAAAGTTTGTGGGCTCTACGGAGTTACTAGTCCAGATGATCATGGCCATGATCATCATGCCAAGCGCCGCAGCATACAGAATTGTAGTGCGGCTACTACTACTACTACTAATGATCATCATCATCAACAAGAAACTATTGCTGCAGGAGGAGGAGGTGGTCAAACTAGGGATTTCCTTGGTGTTGGTGTGCAGGCCATTTGCCACTCATCATCACCATCAATAAACGGGTATTGGACTTGA

Protein Analysis

466

Amino Acids

50.95

Weight (kDa)

9.04

Isoelectric Point (pI)

58.51

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 234, 482
AccB1I GGYRCC 1 cut(s) 1120
AccB7I CCANNNNNTGG 2 cut(s) 35, 59
AccBSI CCGCTC 1 cut(s) 1091
AccII CGCG 3 cut(s) 243, 300, 765
AciI CCGC 8 cut(s) 243, 477, 763, 765, 789, 1089, 1225, 1247
AclWI GGATC 3 cut(s) 57, 70, 119
AcoI YGGCCR 3 cut(s) 168, 244, 1201
AcuI CTGAAG 4 cut(s) 150, 156, 287, 588
AcyI GRCGYC 1 cut(s) 1121
AdeI CACNNNGTG 1 cut(s) 524
AfaI GTAC 3 cut(s) 491, 641, 967
AfiI CCNNNNNNNGG 5 cut(s) 35, 59, 346, 620, 1130
AgsI TTSAA 3 cut(s) 47, 718, 921
AhlI ACTAGT 2 cut(s) 977, 1184
AjnI CCWGG 1 cut(s) 112
AluBI AGCT 6 cut(s) 56, 134, 232, 265, 531, 895
AluI AGCT 6 cut(s) 56, 134, 232, 265, 531, 895
Alw21I GWGCWC 1 cut(s) 428
Alw26I GTCTC 1 cut(s) 156
AlwI GGATC 3 cut(s) 57, 70, 119
AlwNI CAGNNNCTG 2 cut(s) 59, 128
Ama87I CYCGRG 2 cut(s) 345, 483
AoxI GGCC 6 cut(s) 168, 244, 546, 671, 1201, 1350
ApeKI GCWGC 7 cut(s) 56, 229, 590, 892, 1078, 1227, 1298
Asp700I GAANNNNTTC 2 cut(s) 21, 380
AspLEI GCGC 3 cut(s) 300, 1123, 1224
AspS9I GGNCC 2 cut(s) 546, 671
AsuC2I CCSGG 3 cut(s) 346, 347, 545
AsuHPI GGTGA 4 cut(s) 533, 897, 903, 1362
AvaI CYCGRG 2 cut(s) 345, 483
BaeGI GKGCMC 1 cut(s) 314
BalI TGGCCA 2 cut(s) 170, 1203
BamHI GGATCC 1 cut(s) 62
BanI GGYRCC 1 cut(s) 1120
BanII GRGCYC 2 cut(s) 352, 1173
BbsI GAAGAC 1 cut(s) 164
Bbv12I GWGCWC 1 cut(s) 428
BbvI GCAGC 7 cut(s) 43, 241, 602, 904, 1065, 1239, 1285
BccI CCATC 7 cut(s) 160, 243, 349, 610, 778, 916, 1381
BceAI ACGGC 5 cut(s) 425, 536, 591, 705, 1086
BcgI CGANNNNNNTGC 2 cut(s) 218, 252
BciT130I CCWGG 1 cut(s) 114
BciVI GTATCC 1 cut(s) 641
BclI TGATCA 5 cut(s) 823, 859, 1195, 1207, 1270
BcnI CCSGG 3 cut(s) 346, 347, 545
BcoDI GTCTC 1 cut(s) 156
BcuI ACTAGT 2 cut(s) 977, 1184
BfaI CTAG 6 cut(s) 579, 969, 978, 993, 1185, 1323
BfmI CTRYAG 3 cut(s) 227, 1079, 1299
BfoI RGCGCY 2 cut(s) 1124, 1225
BfuAI ACCTGC 2 cut(s) 234, 482
BfuI GTATCC 1 cut(s) 641
BglII AGATCT 1 cut(s) 358
Bme1390I CCNGG 4 cut(s) 114, 346, 347, 545
BmeT110I CYCGRG 2 cut(s) 345, 483
BmgT120I GGNCC 2 cut(s) 546, 671
BmiI GGNNCC 2 cut(s) 64, 1122
BmrFI CCNGG 4 cut(s) 114, 346, 347, 545
BmsI GCATC 4 cut(s) 378, 547, 602, 767
BpiI GAAGAC 1 cut(s) 164
BpuMI CCSGG 3 cut(s) 346, 347, 545
BsaBI GATNNNNATC 3 cut(s) 828, 858, 1275
BsaHI GRCGYC 1 cut(s) 1121
BsaJI CCNNGG 7 cut(s) 112, 257, 290, 345, 763, 1068, 1333
BsaXI ACNNNNNCTCC 4 cut(s) 392, 410, 422, 440
Bsc4I CCNNNNNNNGG 5 cut(s) 35, 59, 346, 620, 1130
Bse1I ACTGG 1 cut(s) 458
Bse3DI GCAATG 2 cut(s) 940, 1124
Bse8I GATNNNNATC 3 cut(s) 828, 858, 1275
BseBI CCWGG 1 cut(s) 114
BseDI CCNNGG 7 cut(s) 112, 257, 290, 345, 763, 1068, 1333
BseGI GGATG 6 cut(s) 341, 593, 758, 774, 786, 1149
BseJI GATNNNNATC 3 cut(s) 828, 858, 1275
BseLI CCNNNNNNNGG 5 cut(s) 35, 59, 346, 620, 1130
BseMI GCAATG 2 cut(s) 940, 1124
BseNI ACTGG 1 cut(s) 458
BseRI GAGGAG 7 cut(s) 66, 69, 72, 75, 930, 1320, 1323
BseSI GKGCMC 1 cut(s) 314
BseXI GCAGC 7 cut(s) 43, 241, 602, 904, 1065, 1239, 1285
BseYI CCCAGC 2 cut(s) 52, 1129
BsgI GTGCAG 2 cut(s) 464, 1367
Bsh1236I CGCG 3 cut(s) 243, 300, 765
BshFI GGCC 6 cut(s) 170, 246, 548, 673, 1203, 1352
BshNI GGYRCC 1 cut(s) 1120
BsiHKAI GWGCWC 1 cut(s) 428
BsiHKCI CYCGRG 2 cut(s) 345, 483
BsiSI CCGG 3 cut(s) 346, 388, 544
BslFI GGGAC 1 cut(s) 520
BslI CCNNNNNNNGG 5 cut(s) 35, 59, 346, 620, 1130
BsmAI GTCTC 1 cut(s) 156
BsmFI GGGAC 1 cut(s) 520
BsnI GGCC 6 cut(s) 170, 246, 548, 673, 1203, 1352
BsoBI CYCGRG 2 cut(s) 345, 483
Bsp1286I GDGCHC 4 cut(s) 314, 352, 428, 1173
Bsp19I CCATGG 1 cut(s) 257
BspACI CCGC 8 cut(s) 243, 477, 763, 765, 789, 1089, 1225, 1247
BspANI GGCC 6 cut(s) 170, 246, 548, 673, 1203, 1352
BspFNI CGCG 3 cut(s) 243, 300, 765
BspHI TCATGA 1 cut(s) 820
BspLI GGNNCC 2 cut(s) 64, 1122
BspMAI CTGCAG 3 cut(s) 231, 1083, 1303
BspMI ACCTGC 2 cut(s) 234, 482
BspPI GGATC 3 cut(s) 57, 70, 119
BspT107I GGYRCC 1 cut(s) 1120
BsrBI CCGCTC 1 cut(s) 1091
BsrDI GCAATG 2 cut(s) 940, 1124
BsrI ACTGG 1 cut(s) 458
BssECI CCNNGG 7 cut(s) 112, 257, 290, 345, 763, 1068, 1333
BssNI GRCGYC 1 cut(s) 1121
BssT1I CCWWGG 2 cut(s) 257, 1333
Bst2UI CCWGG 1 cut(s) 114
Bst4CI ACNGT 2 cut(s) 503, 849
Bst6I CTCTTC 1 cut(s) 95
BstACI GRCGYC 1 cut(s) 1121
BstC8I GCNNGC 2 cut(s) 1005, 1350
BstDSI CCRYGG 3 cut(s) 257, 763, 1068
BstF5I GGATG 6 cut(s) 341, 593, 758, 774, 786, 1149
BstFNI CGCG 3 cut(s) 243, 300, 765
BstH2I RGCGCY 2 cut(s) 1124, 1225
BstHHI GCGC 3 cut(s) 300, 1123, 1224
BstMAI GTCTC 1 cut(s) 156
BstNI CCWGG 1 cut(s) 114
BstSCI CCNGG 4 cut(s) 112, 344, 345, 543
BstSFI CTRYAG 3 cut(s) 227, 1079, 1299
BstSLI GKGCMC 1 cut(s) 314
BstUI CGCG 3 cut(s) 243, 300, 765
BstV1I GCAGC 7 cut(s) 43, 241, 602, 904, 1065, 1239, 1285
BstV2I GAAGAC 1 cut(s) 164
BstX2I RGATCY 3 cut(s) 62, 124, 358
BstYI RGATCY 3 cut(s) 62, 124, 358
BsuI GTATCC 1 cut(s) 641
BsuRI GGCC 6 cut(s) 170, 246, 548, 673, 1203, 1352
BtgI CCRYGG 3 cut(s) 257, 763, 1068
BtgZI GCGATG 2 cut(s) 570, 984
BtsCI GGATG 6 cut(s) 341, 593, 758, 774, 786, 1149
BveI ACCTGC 2 cut(s) 234, 482
Cac8I GCNNGC 2 cut(s) 1005, 1350
CaiI CAGNNNCTG 2 cut(s) 59, 128
CciI TCATGA 1 cut(s) 820
CfoI GCGC 3 cut(s) 300, 1123, 1224
Cfr13I GGNCC 2 cut(s) 546, 671
Cfr42I CCGCGG 1 cut(s) 766
Cfr9I CCCGGG 1 cut(s) 345
CseI GACGC 1 cut(s) 316
Csp6I GTAC 3 cut(s) 490, 640, 966
CspCI CAANNNNNGTGG 2 cut(s) 1147, 1182
CviAII CATG 7 cut(s) 258, 395, 643, 821, 1199, 1205, 1214
CviQI GTAC 3 cut(s) 490, 640, 966
DinI GGCGCC 1 cut(s) 1122
DraI TTTAAA 1 cut(s) 9
DraIII CACNNNGTG 1 cut(s) 524
EaeI YGGCCR 3 cut(s) 168, 244, 1201
Eam1104I CTCTTC 1 cut(s) 95
EarI CTCTTC 1 cut(s) 95
Eco130I CCWWGG 2 cut(s) 257, 1333
Eco24I GRGCYC 2 cut(s) 352, 1173
Eco57I CTGAAG 4 cut(s) 150, 156, 287, 588
Eco88I CYCGRG 2 cut(s) 345, 483
EcoRII CCWGG 1 cut(s) 112
EcoT14I CCWWGG 2 cut(s) 257, 1333
EcoT38I GRGCYC 2 cut(s) 352, 1173
EgeI GGCGCC 1 cut(s) 1122
EheI GGCGCC 1 cut(s) 1122
ErhI CCWWGG 2 cut(s) 257, 1333
FaeI CATG 7 cut(s) 261, 398, 646, 824, 1202, 1208, 1217
FalI AAGNNNNNCTT 4 cut(s) 365, 397, 946, 978
FaqI GGGAC 1 cut(s) 520
FatI CATG 7 cut(s) 257, 394, 642, 820, 1198, 1204, 1213
FauI CCCGC 2 cut(s) 758, 770
FbaI TGATCA 5 cut(s) 823, 859, 1195, 1207, 1270
FokI GGATG 6 cut(s) 328, 580, 745, 781, 793, 1156
FriOI GRGCYC 2 cut(s) 352, 1173
FspBI CTAG 6 cut(s) 579, 969, 978, 993, 1185, 1323
GlaI GCGC 3 cut(s) 299, 1122, 1223
GsaI CCCAGC 2 cut(s) 56, 1133
HaeII RGCGCY 2 cut(s) 1124, 1225
HaeIII GGCC 6 cut(s) 170, 246, 548, 673, 1203, 1352
HapII CCGG 3 cut(s) 346, 388, 544
HgaI GACGC 1 cut(s) 316
HhaI GCGC 3 cut(s) 300, 1123, 1224
Hin1I GRCGYC 1 cut(s) 1121
Hin1II CATG 7 cut(s) 261, 398, 646, 824, 1202, 1208, 1217
Hin6I GCGC 3 cut(s) 298, 1121, 1222
HinP1I GCGC 3 cut(s) 298, 1121, 1222
HincII GTYRAC 1 cut(s) 1104
HindII GTYRAC 1 cut(s) 1104
HinfI GANTC 5 cut(s) 17, 160, 180, 508, 817
HpaII CCGG 3 cut(s) 346, 388, 544
HphI GGTGA 4 cut(s) 533, 897, 903, 1362
Hpy166II GTNNAC 3 cut(s) 331, 586, 1104
Hpy188I TCNGA 9 cut(s) 156, 165, 356, 363, 451, 615, 659, 853, 864
Hpy188III TCNNGA 7 cut(s) 47, 128, 373, 485, 821, 950, 1190
Hpy8I GTNNAC 3 cut(s) 331, 586, 1104
Hpy99I CGWCG 2 cut(s) 243, 853
HpyAV CCTTC 3 cut(s) 263, 451, 1050
HpyCH4III ACNGT 2 cut(s) 503, 849
HpyCH4V TGCA 5 cut(s) 229, 445, 1081, 1301, 1348
Hsp92I GRCGYC 1 cut(s) 1121
Hsp92II CATG 7 cut(s) 261, 398, 646, 824, 1202, 1208, 1217
HspAI GCGC 3 cut(s) 298, 1121, 1222
KasI GGCGCC 1 cut(s) 1120
Ksp22I TGATCA 5 cut(s) 823, 859, 1195, 1207, 1270
KspI CCGCGG 1 cut(s) 766
LmnI GCTCC 4 cut(s) 237, 431, 659, 943
Lsp1109I GCAGC 7 cut(s) 43, 241, 602, 904, 1065, 1239, 1285
LweI GCATC 4 cut(s) 378, 547, 602, 767
MaeI CTAG 6 cut(s) 579, 969, 978, 993, 1185, 1323
MaeIII GTNAC 3 cut(s) 416, 497, 1180
MbiI CCGCTC 1 cut(s) 1091
MboII GAAGA 6 cut(s) 26, 112, 169, 415, 581, 699
MflI RGATCY 3 cut(s) 62, 124, 358
MhlI GDGCHC 4 cut(s) 314, 352, 428, 1173
MlsI TGGCCA 2 cut(s) 170, 1203
MluCI AATT 7 cut(s) 21, 631, 799, 871, 1011, 1095, 1237
MluNI TGGCCA 2 cut(s) 170, 1203
Mly113I GGCGCC 1 cut(s) 1121
MlyI GAGTC 2 cut(s) 154, 502
MmeI TCCRAC 2 cut(s) 831, 862
Mox20I TGGCCA 2 cut(s) 170, 1203
MroXI GAANNNNTTC 2 cut(s) 21, 380
MscI TGGCCA 2 cut(s) 170, 1203
MseI TTAA 3 cut(s) 8, 603, 1010
MslI CAYNNNNRTG 2 cut(s) 614, 1203
Msp20I TGGCCA 2 cut(s) 170, 1203
MspA1I CMGCKG 3 cut(s) 56, 765, 895
MspI CCGG 3 cut(s) 346, 388, 544
MspR9I CCNGG 4 cut(s) 114, 346, 347, 545
MvaI CCWGG 1 cut(s) 114
MvnI CGCG 3 cut(s) 243, 300, 765
NarI GGCGCC 1 cut(s) 1121
NciI CCSGG 3 cut(s) 346, 347, 545
NcoI CCATGG 1 cut(s) 257
NlaIII CATG 7 cut(s) 261, 398, 646, 824, 1202, 1208, 1217
NlaIV GGNNCC 2 cut(s) 64, 1122
NmuCI GTSAC 2 cut(s) 416, 497
PagI TCATGA 1 cut(s) 820
PdmI GAANNNNTTC 2 cut(s) 21, 380
PfeI GAWTC 3 cut(s) 17, 180, 817
PflMI CCANNNNNTGG 2 cut(s) 35, 59
PleI GAGTC 2 cut(s) 154, 502
PluTI GGCGCC 1 cut(s) 1124
PpsI GAGTC 2 cut(s) 154, 502
Psp6I CCWGG 1 cut(s) 112
PspFI CCCAGC 2 cut(s) 52, 1129
PspGI CCWGG 1 cut(s) 112
PspN4I GGNNCC 2 cut(s) 64, 1122
PspPI GGNCC 2 cut(s) 546, 671
PsrI GAACNNNNNNTAC 2 cut(s) 973, 1005
PstI CTGCAG 3 cut(s) 231, 1083, 1303
PstNI CAGNNNCTG 2 cut(s) 59, 128
PsuI RGATCY 3 cut(s) 62, 124, 358
PvuII CAGCTG 2 cut(s) 56, 895
RsaI GTAC 3 cut(s) 491, 641, 967
RsaNI GTAC 3 cut(s) 490, 640, 966
RseI CAYNNNNRTG 2 cut(s) 614, 1203
SacII CCGCGG 1 cut(s) 766
SaqAI TTAA 3 cut(s) 8, 603, 1010
Sau96I GGNCC 2 cut(s) 546, 671
SchI GAGTC 2 cut(s) 154, 502
ScrFI CCNGG 4 cut(s) 114, 346, 347, 545
SduI GDGCHC 4 cut(s) 314, 352, 428, 1173
SfaNI GCATC 4 cut(s) 378, 547, 602, 767
SfcI CTRYAG 3 cut(s) 227, 1079, 1299
SfoI GGCGCC 1 cut(s) 1122
Sfr303I CCGCGG 1 cut(s) 766
SgrBI CCGCGG 1 cut(s) 766
SmaI CCCGGG 1 cut(s) 347
SmiMI CAYNNNNRTG 2 cut(s) 614, 1203
SpeI ACTAGT 2 cut(s) 977, 1184
Sse9I AATT 7 cut(s) 21, 631, 799, 871, 1011, 1095, 1237
SsiI CCGC 8 cut(s) 243, 477, 763, 765, 789, 1089, 1225, 1247
SspDI GGCGCC 1 cut(s) 1120
SspI AATATT 3 cut(s) 601, 701, 745
SspMI CTAG 6 cut(s) 579, 969, 978, 993, 1185, 1323
StyD4I CCNGG 4 cut(s) 112, 344, 345, 543
StyI CCWWGG 2 cut(s) 257, 1333
TaaI ACNGT 2 cut(s) 503, 849
TaqI TCGA 1 cut(s) 1112
TasI AATT 7 cut(s) 21, 631, 799, 871, 1011, 1095, 1237
TatI WGTACW 3 cut(s) 489, 639, 965
TauI GCSGC 6 cut(s) 246, 480, 792, 1091, 1227, 1250
TfiI GAWTC 3 cut(s) 17, 180, 817
Tru1I TTAA 3 cut(s) 8, 603, 1010
Tru9I TTAA 3 cut(s) 8, 603, 1010
TseFI GTSAC 2 cut(s) 416, 497
TseI GCWGC 7 cut(s) 56, 229, 590, 892, 1078, 1227, 1298
Tsp45I GTSAC 2 cut(s) 416, 497
TspDTI ATGAA 6 cut(s) 27, 47, 523, 891, 987, 1160
TspGWI ACGGA 1 cut(s) 1191
TspMI CCCGGG 1 cut(s) 345
Van91I CCANNNNNTGG 2 cut(s) 35, 59
XmaI CCCGGG 1 cut(s) 345
XmnI GAANNNNTTC 2 cut(s) 21, 380
XspI CTAG 6 cut(s) 579, 969, 978, 993, 1185, 1323
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.