Zinc finger protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| SCAF11-like_C | PF23030 | 907 - 978 | 4.7e-06 | SCAF11-like, C-terminal domain |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 320 |
| Acc36I | ACCTGC | 1 cut(s) | 408 |
| Acc65I | GGTACC | 1 cut(s) | 2822 |
| AccB1I | GGYRCC | 1 cut(s) | 2822 |
| AccB7I | CCANNNNNTGG | 6 cut(s) | 83, 155, 324, 494, 1172, 1877 |
| AccIII | TCCGGA | 3 cut(s) | 1303, 1501, 1627 |
| AciI | CCGC | 5 cut(s) | 101, 294, 931, 966, 2720 |
| AclWI | GGATC | 3 cut(s) | 2320, 2369, 2742 |
| AcsI | RAATTY | 4 cut(s) | 956, 1575, 2266, 2708 |
| AcuI | CTGAAG | 4 cut(s) | 66, 1749, 1773, 2328 |
| AfaI | GTAC | 3 cut(s) | 1776, 2824, 2910 |
| AfeI | AGCGCT | 1 cut(s) | 2028 |
| AflII | CTTAAG | 1 cut(s) | 2399 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1123 |
| AhlI | ACTAGT | 1 cut(s) | 2134 |
| AjiI | CACGTC | 1 cut(s) | 134 |
| AleI | CACNNNNGTG | 1 cut(s) | 1435 |
| Alw21I | GWGCWC | 1 cut(s) | 1693 |
| Alw26I | GTCTC | 7 cut(s) | 185, 363, 373, 1503, 1629, 2212, 2364 |
| Alw44I | GTGCAC | 1 cut(s) | 1689 |
| AlwI | GGATC | 3 cut(s) | 2320, 2369, 2742 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1133 |
| Aor13HI | TCCGGA | 3 cut(s) | 1303, 1501, 1627 |
| Aor51HI | AGCGCT | 1 cut(s) | 2028 |
| AoxI | GGCC | 6 cut(s) | 107, 1066, 1163, 1182, 1189, 2143 |
| ApaI | GGGCCC | 1 cut(s) | 1186 |
| ApaLI | GTGCAC | 1 cut(s) | 1689 |
| ApeKI | GCWGC | 7 cut(s) | 12, 297, 345, 669, 1406, 2258, 2323 |
| ApoI | RAATTY | 4 cut(s) | 956, 1575, 2266, 2708 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1928, 1960 |
| AseI | ATTAAT | 2 cut(s) | 756, 1587 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 730 |
| Asp718I | GGTACC | 1 cut(s) | 2822 |
| AspA2I | CCTAGG | 1 cut(s) | 2528 |
| AspLEI | GCGC | 2 cut(s) | 674, 2029 |
| AspS9I | GGNCC | 7 cut(s) | 396, 453, 1066, 1182, 1183, 1189, 2630 |
| AsuC2I | CCSGG | 1 cut(s) | 2832 |
| AsuHPI | GGTGA | 3 cut(s) | 791, 953, 1394 |
| AsuNHI | GCTAGC | 1 cut(s) | 1736 |
| AvaII | GGWCC | 3 cut(s) | 396, 453, 2630 |
| AvrII | CCTAGG | 1 cut(s) | 2528 |
| BaeGI | GKGCMC | 2 cut(s) | 1186, 1693 |
| BanI | GGYRCC | 1 cut(s) | 2822 |
| BanII | GRGCYC | 1 cut(s) | 1186 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 154, 186 |
| BbsI | GAAGAC | 3 cut(s) | 318, 723, 2462 |
| Bbv12I | GWGCWC | 1 cut(s) | 1693 |
| BbvCI | CCTCAGC | 1 cut(s) | 1310 |
| BbvI | GCAGC | 7 cut(s) | 24, 309, 357, 681, 1418, 2245, 2335 |
| BceAI | ACGGC | 1 cut(s) | 2470 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 184, 218 |
| BciVI | GTATCC | 1 cut(s) | 2688 |
| BcnI | CCSGG | 1 cut(s) | 2832 |
| BcoDI | GTCTC | 7 cut(s) | 185, 363, 373, 1503, 1629, 2212, 2364 |
| BcuI | ACTAGT | 1 cut(s) | 2134 |
| BfaI | CTAG | 6 cut(s) | 768, 783, 1737, 1905, 2135, 2529 |
| BfmI | CTRYAG | 3 cut(s) | 499, 903, 1829 |
| BfoI | RGCGCY | 2 cut(s) | 675, 2030 |
| BfrI | CTTAAG | 1 cut(s) | 2399 |
| BfuAI | ACCTGC | 1 cut(s) | 408 |
| BfuI | GTATCC | 1 cut(s) | 2688 |
| BglII | AGATCT | 2 cut(s) | 209, 2179 |
| BisI | GCNGC | 9 cut(s) | 13, 295, 298, 346, 670, 966, 1407, 2259, 2324 |
| BlnI | CCTAGG | 1 cut(s) | 2528 |
| BlsI | GCNGC | 9 cut(s) | 14, 296, 299, 347, 671, 967, 1408, 2260, 2325 |
| Bme18I | GGWCC | 3 cut(s) | 396, 453, 2630 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1123 |
| BmgBI | CACGTC | 1 cut(s) | 134 |
| BmgT120I | GGNCC | 7 cut(s) | 396, 453, 1066, 1182, 1183, 1189, 2630 |
| BmiI | GGNNCC | 4 cut(s) | 398, 1184, 2632, 2824 |
| BmsI | GCATC | 6 cut(s) | 55, 575, 788, 886, 1195, 2767 |
| BmtI | GCTAGC | 1 cut(s) | 1740 |
| BpiI | GAAGAC | 3 cut(s) | 318, 723, 2462 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 128, 160, 2600, 2632 |
| BpmI | CTGGAG | 3 cut(s) | 132, 496, 2136 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1310 |
| BpuEI | CTTGAG | 2 cut(s) | 540, 2663 |
| BpuMI | CCSGG | 1 cut(s) | 2832 |
| BsaAI | YACGTR | 1 cut(s) | 2699 |
| BsaBI | GATNNNNATC | 2 cut(s) | 232, 2499 |
| BsaJI | CCNNGG | 9 cut(s) | 237, 318, 1166, 1185, 1186, 2047, 2528, 2634, 2831 |
| BsaWI | WCCGGW | 3 cut(s) | 1303, 1501, 1627 |
| Bse1I | ACTGG | 6 cut(s) | 1162, 2146, 2153, 2196, 2545, 2824 |
| Bse3DI | GCAATG | 2 cut(s) | 1517, 1643 |
| Bse8I | GATNNNNATC | 2 cut(s) | 232, 2499 |
| BseAI | TCCGGA | 3 cut(s) | 1303, 1501, 1627 |
| BseDI | CCNNGG | 9 cut(s) | 237, 318, 1166, 1185, 1186, 2047, 2528, 2634, 2831 |
| BseGI | GGATG | 7 cut(s) | 96, 233, 334, 360, 1054, 1177, 1228 |
| BseJI | GATNNNNATC | 2 cut(s) | 232, 2499 |
| BseMI | GCAATG | 2 cut(s) | 1517, 1643 |
| BseMII | CTCAG | 5 cut(s) | 416, 1301, 2231, 2310, 2375 |
| BseNI | ACTGG | 6 cut(s) | 1162, 2146, 2153, 2196, 2545, 2824 |
| BseSI | GKGCMC | 2 cut(s) | 1186, 1693 |
| BseXI | GCAGC | 7 cut(s) | 24, 309, 357, 681, 1418, 2245, 2335 |
| BseYI | CCCAGC | 2 cut(s) | 645, 2035 |
| BsgI | GTGCAG | 2 cut(s) | 1296, 1991 |
| BshFI | GGCC | 6 cut(s) | 109, 1068, 1165, 1184, 1191, 2145 |
| BshNI | GGYRCC | 1 cut(s) | 2822 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1693 |
| BsiSI | CCGG | 4 cut(s) | 1304, 1502, 1628, 2831 |
| BslFI | GGGAC | 5 cut(s) | 382, 719, 869, 887, 2616 |
| BsmAI | GTCTC | 7 cut(s) | 185, 363, 373, 1503, 1629, 2212, 2364 |
| BsmBI | CGTCTC | 1 cut(s) | 185 |
| BsmFI | GGGAC | 5 cut(s) | 382, 719, 869, 887, 2616 |
| BsmI | GAATGC | 2 cut(s) | 1891, 2290 |
| BsnI | GGCC | 6 cut(s) | 109, 1068, 1165, 1184, 1191, 2145 |
| Bsp120I | GGGCCC | 1 cut(s) | 1182 |
| Bsp1286I | GDGCHC | 2 cut(s) | 1186, 1693 |
| Bsp13I | TCCGGA | 3 cut(s) | 1303, 1501, 1627 |
| Bsp1407I | TGTACA | 1 cut(s) | 2908 |
| Bsp143I | GATC | 7 cut(s) | 209, 490, 539, 2179, 2312, 2374, 2734 |
| Bsp19I | CCATGG | 1 cut(s) | 318 |
| BspACI | CCGC | 5 cut(s) | 101, 294, 931, 966, 2720 |
| BspANI | GGCC | 6 cut(s) | 109, 1068, 1165, 1184, 1191, 2145 |
| BspCNI | CTCAG | 5 cut(s) | 417, 1302, 2230, 2311, 2374 |
| BspEI | TCCGGA | 3 cut(s) | 1303, 1501, 1627 |
| BspHI | TCATGA | 1 cut(s) | 1399 |
| BspLI | GGNNCC | 4 cut(s) | 398, 1184, 2632, 2824 |
| BspMI | ACCTGC | 1 cut(s) | 408 |
| BspOI | GCTAGC | 1 cut(s) | 1740 |
| BspPI | GGATC | 3 cut(s) | 2320, 2369, 2742 |
| BspQI | GCTCTTC | 4 cut(s) | 31, 42, 1539, 1668 |
| BspT107I | GGYRCC | 1 cut(s) | 2822 |
| BspTI | CTTAAG | 1 cut(s) | 2399 |
| BsrDI | GCAATG | 2 cut(s) | 1517, 1643 |
| BsrGI | TGTACA | 1 cut(s) | 2908 |
| BsrI | ACTGG | 6 cut(s) | 1162, 2146, 2153, 2196, 2545, 2824 |
| BssECI | CCNNGG | 9 cut(s) | 237, 318, 1166, 1185, 1186, 2047, 2528, 2634, 2831 |
| BssMI | GATC | 7 cut(s) | 209, 490, 539, 2179, 2312, 2374, 2734 |
| BssT1I | CCWWGG | 4 cut(s) | 318, 2047, 2528, 2634 |
| Bst4CI | ACNGT | 6 cut(s) | 878, 1073, 1246, 1437, 1688, 2870 |
| Bst6I | CTCTTC | 6 cut(s) | 31, 42, 886, 1539, 1668, 2601 |
| BstAFI | CTTAAG | 1 cut(s) | 2399 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2285 |
| BstAUI | TGTACA | 1 cut(s) | 2908 |
| BstBAI | YACGTR | 1 cut(s) | 2699 |
| BstC8I | GCNNGC | 4 cut(s) | 1609, 1738, 2214, 2431 |
| BstDEI | CTNAG | 7 cut(s) | 213, 425, 1310, 1461, 2217, 2319, 2361 |
| BstDSI | CCRYGG | 2 cut(s) | 318, 1166 |
| BstEII | GGTNACC | 1 cut(s) | 1382 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 699 |
| BstF5I | GGATG | 7 cut(s) | 96, 233, 334, 360, 1054, 1177, 1228 |
| BstH2I | RGCGCY | 2 cut(s) | 675, 2030 |
| BstHHI | GCGC | 2 cut(s) | 674, 2029 |
| BstKTI | GATC | 7 cut(s) | 212, 493, 542, 2182, 2315, 2377, 2737 |
| BstMAI | GTCTC | 7 cut(s) | 185, 363, 373, 1503, 1629, 2212, 2364 |
| BstMBI | GATC | 7 cut(s) | 209, 490, 539, 2179, 2312, 2374, 2734 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 21, 49, 1214, 2248, 2285 |
| BstNSI | RCATGY | 1 cut(s) | 1025 |
| BstPI | GGTNACC | 1 cut(s) | 1382 |
| BstSFI | CTRYAG | 3 cut(s) | 499, 903, 1829 |
| BstSLI | GKGCMC | 2 cut(s) | 1186, 1693 |
| BstV1I | GCAGC | 7 cut(s) | 24, 309, 357, 681, 1418, 2245, 2335 |
| BstV2I | GAAGAC | 3 cut(s) | 318, 723, 2462 |
| BstX2I | RGATCY | 4 cut(s) | 209, 2179, 2312, 2734 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 1379, 1778 |
| BstYI | RGATCY | 4 cut(s) | 209, 2179, 2312, 2734 |
| BsuI | GTATCC | 1 cut(s) | 2688 |
| BsuRI | GGCC | 6 cut(s) | 109, 1068, 1165, 1184, 1191, 2145 |
| BtgI | CCRYGG | 2 cut(s) | 318, 1166 |
| BtrI | CACGTC | 1 cut(s) | 134 |
| BtsCI | GGATG | 7 cut(s) | 96, 233, 334, 360, 1054, 1177, 1228 |
| BtsIMutI | CAGTG | 5 cut(s) | 422, 883, 1693, 1914, 2160 |
| BveI | ACCTGC | 1 cut(s) | 408 |
| Cac8I | GCNNGC | 4 cut(s) | 1609, 1738, 2214, 2431 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1133 |
| CciI | TCATGA | 1 cut(s) | 1399 |
| CfoI | GCGC | 2 cut(s) | 674, 2029 |
| Cfr13I | GGNCC | 7 cut(s) | 396, 453, 1066, 1182, 1183, 1189, 2630 |
| Csp6I | GTAC | 3 cut(s) | 1775, 2823, 2909 |
| CviQI | GTAC | 3 cut(s) | 1775, 2823, 2909 |
| DdeI | CTNAG | 7 cut(s) | 213, 425, 1310, 1461, 2217, 2319, 2361 |
| DpnI | GATC | 7 cut(s) | 211, 492, 541, 2181, 2314, 2376, 2736 |
| DpnII | GATC | 7 cut(s) | 209, 490, 539, 2179, 2312, 2374, 2734 |
| DraI | TTTAAA | 5 cut(s) | 1077, 1602, 2265, 2707, 2742 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 320 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1123 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 320 |
| Eam1104I | CTCTTC | 6 cut(s) | 31, 42, 886, 1539, 1668, 2601 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1123 |
| EarI | CTCTTC | 6 cut(s) | 31, 42, 886, 1539, 1668, 2601 |
| Eco130I | CCWWGG | 4 cut(s) | 318, 2047, 2528, 2634 |
| Eco24I | GRGCYC | 1 cut(s) | 1186 |
| Eco47I | GGWCC | 3 cut(s) | 396, 453, 2630 |
| Eco47III | AGCGCT | 1 cut(s) | 2028 |
| Eco57I | CTGAAG | 4 cut(s) | 66, 1749, 1773, 2328 |
| Eco91I | GGTNACC | 1 cut(s) | 1382 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 699 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1183 |
| EcoO65I | GGTNACC | 1 cut(s) | 1382 |
| EcoT14I | CCWWGG | 4 cut(s) | 318, 2047, 2528, 2634 |
| EcoT22I | ATGCAT | 2 cut(s) | 2281, 2782 |
| EcoT38I | GRGCYC | 1 cut(s) | 1186 |
| ErhI | CCWWGG | 4 cut(s) | 318, 2047, 2528, 2634 |
| Esp3I | CGTCTC | 1 cut(s) | 185 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 883, 915, 2040, 2072, 2418, 2450 |
| FaqI | GGGAC | 5 cut(s) | 382, 719, 869, 887, 2616 |
| FauI | CCCGC | 2 cut(s) | 94, 938 |
| FauNDI | CATATG | 2 cut(s) | 2371, 2917 |
| Fnu4HI | GCNGC | 9 cut(s) | 13, 295, 298, 346, 670, 966, 1407, 2259, 2324 |
| FokI | GGATG | 7 cut(s) | 103, 220, 341, 367, 1061, 1184, 1235 |
| FriOI | GRGCYC | 1 cut(s) | 1186 |
| Fsp4HI | GCNGC | 9 cut(s) | 13, 295, 298, 346, 670, 966, 1407, 2259, 2324 |
| FspBI | CTAG | 6 cut(s) | 768, 783, 1737, 1905, 2135, 2529 |
| GlaI | GCGC | 2 cut(s) | 673, 2028 |
| GluI | GCNGC | 9 cut(s) | 13, 295, 298, 346, 670, 966, 1407, 2259, 2324 |
| GsaI | CCCAGC | 2 cut(s) | 649, 2039 |
| GsuI | CTGGAG | 3 cut(s) | 132, 496, 2136 |
| HaeII | RGCGCY | 2 cut(s) | 675, 2030 |
| HaeIII | GGCC | 6 cut(s) | 109, 1068, 1165, 1184, 1191, 2145 |
| HapII | CCGG | 4 cut(s) | 1304, 1502, 1628, 2831 |
| HhaI | GCGC | 2 cut(s) | 674, 2029 |
| Hin6I | GCGC | 2 cut(s) | 672, 2027 |
| HinP1I | GCGC | 2 cut(s) | 672, 2027 |
| HincII | GTYRAC | 1 cut(s) | 2809 |
| HindII | GTYRAC | 1 cut(s) | 2809 |
| HindIII | AAGCTT | 2 cut(s) | 243, 1954 |
| HpaII | CCGG | 4 cut(s) | 1304, 1502, 1628, 2831 |
| HphI | GGTGA | 3 cut(s) | 791, 953, 1394 |
| Hpy166II | GTNNAC | 3 cut(s) | 926, 1691, 2809 |
| Hpy8I | GTNNAC | 3 cut(s) | 926, 1691, 2809 |
| HpyCH4III | ACNGT | 6 cut(s) | 878, 1073, 1246, 1437, 1688, 2870 |
| HpyCH4IV | ACGT | 3 cut(s) | 133, 1652, 2698 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 21, 49, 1214, 2248, 2285 |
| HpyF3I | CTNAG | 7 cut(s) | 213, 425, 1310, 1461, 2217, 2319, 2361 |
| HpySE526I | ACGT | 3 cut(s) | 133, 1652, 2698 |
| HspAI | GCGC | 2 cut(s) | 672, 2027 |
| Kpn2I | TCCGGA | 3 cut(s) | 1303, 1501, 1627 |
| KpnI | GGTACC | 1 cut(s) | 2826 |
| Kzo9I | GATC | 7 cut(s) | 209, 490, 539, 2179, 2312, 2374, 2734 |
| LguI | GCTCTTC | 4 cut(s) | 31, 42, 1539, 1668 |
| LmnI | GCTCC | 3 cut(s) | 414, 477, 1306 |
| Lsp1109I | GCAGC | 7 cut(s) | 24, 309, 357, 681, 1418, 2245, 2335 |
| LweI | GCATC | 6 cut(s) | 55, 575, 788, 886, 1195, 2767 |
| MaeI | CTAG | 6 cut(s) | 768, 783, 1737, 1905, 2135, 2529 |
| MaeII | ACGT | 3 cut(s) | 133, 1652, 2698 |
| MalI | GATC | 7 cut(s) | 211, 492, 541, 2181, 2314, 2376, 2736 |
| MboI | GATC | 7 cut(s) | 209, 490, 539, 2179, 2312, 2374, 2734 |
| MfeI | CAATTG | 1 cut(s) | 1890 |
| MflI | RGATCY | 4 cut(s) | 209, 2179, 2312, 2734 |
| MhlI | GDGCHC | 2 cut(s) | 1186, 1693 |
| MlyI | GAGTC | 5 cut(s) | 308, 493, 1153, 1243, 1268 |
| MmeI | TCCRAC | 4 cut(s) | 68, 392, 959, 1680 |
| Mph1103I | ATGCAT | 2 cut(s) | 2281, 2782 |
| MroI | TCCGGA | 3 cut(s) | 1303, 1501, 1627 |
| MroXI | GAANNNNTTC | 1 cut(s) | 730 |
| MslI | CAYNNNNRTG | 5 cut(s) | 273, 353, 663, 1435, 1782 |
| MspCI | CTTAAG | 1 cut(s) | 2399 |
| MspI | CCGG | 4 cut(s) | 1304, 1502, 1628, 2831 |
| MunI | CAATTG | 1 cut(s) | 1890 |
| Mva1269I | GAATGC | 2 cut(s) | 1891, 2290 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 21, 49, 1214, 2248, 2285 |
| NciI | CCSGG | 1 cut(s) | 2832 |
| NcoI | CCATGG | 1 cut(s) | 318 |
| NdeI | CATATG | 2 cut(s) | 2371, 2917 |
| NdeII | GATC | 7 cut(s) | 209, 490, 539, 2179, 2312, 2374, 2734 |
| NheI | GCTAGC | 1 cut(s) | 1736 |
| NlaIV | GGNNCC | 4 cut(s) | 398, 1184, 2632, 2824 |
| NmuCI | GTSAC | 9 cut(s) | 420, 1017, 1041, 1246, 1382, 1553, 1682, 1944, 2815 |
| NsiI | ATGCAT | 2 cut(s) | 2281, 2782 |
| NspI | RCATGY | 1 cut(s) | 1025 |
| OliI | CACNNNNGTG | 1 cut(s) | 1435 |
| PagI | TCATGA | 1 cut(s) | 1399 |
| PasI | CCCWGGG | 1 cut(s) | 1186 |
| PciSI | GCTCTTC | 4 cut(s) | 31, 42, 1539, 1668 |
| PctI | GAATGC | 2 cut(s) | 1891, 2290 |
| PdmI | GAANNNNTTC | 1 cut(s) | 730 |
| PfeI | GAWTC | 7 cut(s) | 125, 509, 1130, 1703, 2120, 2506, 2551 |
| PflMI | CCANNNNNTGG | 6 cut(s) | 83, 155, 324, 494, 1172, 1877 |
| PkrI | GCNGC | 9 cut(s) | 14, 296, 299, 347, 671, 967, 1408, 2260, 2325 |
| PleI | GAGTC | 5 cut(s) | 308, 492, 1152, 1243, 1267 |
| PpsI | GAGTC | 5 cut(s) | 308, 492, 1152, 1243, 1267 |
| Ppu21I | YACGTR | 1 cut(s) | 2699 |
| PshBI | ATTAAT | 2 cut(s) | 756, 1587 |
| PspEI | GGTNACC | 1 cut(s) | 1382 |
| PspFI | CCCAGC | 2 cut(s) | 645, 2035 |
| PspN4I | GGNNCC | 4 cut(s) | 398, 1184, 2632, 2824 |
| PspOMI | GGGCCC | 1 cut(s) | 1182 |
| PspPI | GGNCC | 7 cut(s) | 396, 453, 1066, 1182, 1183, 1189, 2630 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1133 |
| PsuI | RGATCY | 4 cut(s) | 209, 2179, 2312, 2734 |
| RsaI | GTAC | 3 cut(s) | 1776, 2824, 2910 |
| RsaNI | GTAC | 3 cut(s) | 1775, 2823, 2909 |
| RseI | CAYNNNNRTG | 5 cut(s) | 273, 353, 663, 1435, 1782 |
| SapI | GCTCTTC | 4 cut(s) | 31, 42, 1539, 1668 |
| SatI | GCNGC | 9 cut(s) | 13, 295, 298, 346, 670, 966, 1407, 2259, 2324 |
| Sau3AI | GATC | 7 cut(s) | 209, 490, 539, 2179, 2312, 2374, 2734 |
| Sau96I | GGNCC | 7 cut(s) | 396, 453, 1066, 1182, 1183, 1189, 2630 |
| SchI | GAGTC | 5 cut(s) | 308, 493, 1153, 1243, 1268 |
| SduI | GDGCHC | 2 cut(s) | 1186, 1693 |
| SfaNI | GCATC | 6 cut(s) | 55, 575, 788, 886, 1195, 2767 |
| SfcI | CTRYAG | 3 cut(s) | 499, 903, 1829 |
| SinI | GGWCC | 3 cut(s) | 396, 453, 2630 |
| SmiI | ATTTAAAT | 1 cut(s) | 2707 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 273, 353, 663, 1435, 1782 |
| SmlI | CTYRAG | 3 cut(s) | 555, 2399, 2678 |
| SmoI | CTYRAG | 3 cut(s) | 555, 2399, 2678 |
| SpeI | ACTAGT | 1 cut(s) | 2134 |
| SsiI | CCGC | 5 cut(s) | 101, 294, 931, 966, 2720 |
| SspI | AATATT | 5 cut(s) | 683, 1294, 1534, 1663, 2842 |
| SspMI | CTAG | 6 cut(s) | 768, 783, 1737, 1905, 2135, 2529 |
| StyI | CCWWGG | 4 cut(s) | 318, 2047, 2528, 2634 |
| SwaI | ATTTAAAT | 1 cut(s) | 2707 |
| TaaI | ACNGT | 6 cut(s) | 878, 1073, 1246, 1437, 1688, 2870 |
| TaiI | ACGT | 3 cut(s) | 136, 1655, 2701 |
| TaqI | TCGA | 2 cut(s) | 1105, 1756 |
| TaqII | GACCGA | 1 cut(s) | 384 |
| TatI | WGTACW | 1 cut(s) | 2908 |
| TauI | GCSGC | 2 cut(s) | 297, 968 |
| TfiI | GAWTC | 7 cut(s) | 125, 509, 1130, 1703, 2120, 2506, 2551 |
| TscAI | CASTG | 5 cut(s) | 429, 883, 1693, 1921, 2160 |
| TseFI | GTSAC | 9 cut(s) | 420, 1017, 1041, 1246, 1382, 1553, 1682, 1944, 2815 |
| TseI | GCWGC | 7 cut(s) | 12, 297, 345, 669, 1406, 2258, 2323 |
| Tsp45I | GTSAC | 9 cut(s) | 420, 1017, 1041, 1246, 1382, 1553, 1682, 1944, 2815 |
| TspDTI | ATGAA | 8 cut(s) | 104, 291, 345, 742, 1346, 1416, 2018, 2586 |
| TspGWI | ACGGA | 2 cut(s) | 1113, 1302 |
| TspRI | CASTG | 5 cut(s) | 429, 883, 1693, 1921, 2160 |
| Van91I | CCANNNNNTGG | 6 cut(s) | 83, 155, 324, 494, 1172, 1877 |
| Vha464I | CTTAAG | 1 cut(s) | 2399 |
| VneI | GTGCAC | 1 cut(s) | 1689 |
| VpaK11BI | GGWCC | 3 cut(s) | 396, 453, 2630 |
| VspI | ATTAAT | 2 cut(s) | 756, 1587 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 699 |
| XapI | RAATTY | 4 cut(s) | 956, 1575, 2266, 2708 |
| XceI | RCATGY | 1 cut(s) | 1025 |
| XcmI | CCANNNNNNNNNTGG | 4 cut(s) | 84, 1097, 1220, 1778 |
| XmaJI | CCTAGG | 1 cut(s) | 2528 |
| XmnI | GAANNNNTTC | 1 cut(s) | 730 |
| XspI | CTAG | 6 cut(s) | 768, 783, 1737, 1905, 2135, 2529 |
| Zsp2I | ATGCAT | 2 cut(s) | 2281, 2782 |