isoform X1
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 404, 786 |
| AarI | CACCTGC | 1 cut(s) | 641 |
| Acc36I | ACCTGC | 1 cut(s) | 641 |
| AccB1I | GGYRCC | 2 cut(s) | 280, 2067 |
| AccII | CGCG | 1 cut(s) | 573 |
| AciI | CCGC | 7 cut(s) | 998, 1016, 1172, 1212, 1385, 1660, 1724 |
| AclI | AACGTT | 1 cut(s) | 946 |
| AclWI | GGATC | 2 cut(s) | 423, 917 |
| AcoI | YGGCCR | 3 cut(s) | 1981, 1985, 2047 |
| AcsI | RAATTY | 4 cut(s) | 232, 443, 1285, 1307 |
| AcyI | GRCGYC | 1 cut(s) | 2068 |
| AfaI | GTAC | 2 cut(s) | 497, 2089 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 290, 1279 |
| AflII | CTTAAG | 2 cut(s) | 1277, 1546 |
| AflIII | ACRYGT | 1 cut(s) | 2084 |
| AjnI | CCWGG | 2 cut(s) | 154, 1232 |
| AluBI | AGCT | 9 cut(s) | 168, 365, 667, 824, 859, 1344, 1519, 1866, 1934 |
| AluI | AGCT | 9 cut(s) | 168, 365, 667, 824, 859, 1344, 1519, 1866, 1934 |
| Alw21I | GWGCWC | 2 cut(s) | 29, 272 |
| Alw26I | GTCTC | 5 cut(s) | 35, 681, 753, 1173, 1682 |
| Alw44I | GTGCAC | 1 cut(s) | 25 |
| AlwI | GGATC | 2 cut(s) | 423, 917 |
| AoxI | GGCC | 3 cut(s) | 1981, 1985, 2047 |
| ApaLI | GTGCAC | 1 cut(s) | 25 |
| ApeKI | GCWGC | 5 cut(s) | 652, 859, 1799, 1931, 2012 |
| ApoI | RAATTY | 4 cut(s) | 232, 443, 1285, 1307 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 1492, 1524, 1594, 1626 |
| AseI | ATTAAT | 1 cut(s) | 1770 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1398 |
| AspLEI | GCGC | 2 cut(s) | 575, 2070 |
| AspS9I | GGNCC | 2 cut(s) | 1382, 1602 |
| AsuC2I | CCSGG | 1 cut(s) | 897 |
| AsuHPI | GGTGA | 5 cut(s) | 262, 601, 1320, 1472, 2069 |
| AsuII | TTCGAA | 1 cut(s) | 1999 |
| AvaII | GGWCC | 2 cut(s) | 1382, 1602 |
| BaeGI | GKGCMC | 1 cut(s) | 29 |
| BanI | GGYRCC | 2 cut(s) | 280, 2067 |
| BanII | GRGCYC | 1 cut(s) | 902 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 295, 327 |
| BauI | CACGAG | 1 cut(s) | 2026 |
| Bbv12I | GWGCWC | 2 cut(s) | 29, 272 |
| BbvI | GCAGC | 5 cut(s) | 664, 846, 1786, 1943, 2024 |
| BccI | CCATC | 2 cut(s) | 545, 833 |
| BceAI | ACGGC | 3 cut(s) | 1399, 1740, 1831 |
| BciT130I | CCWGG | 2 cut(s) | 156, 1234 |
| BciVI | GTATCC | 1 cut(s) | 1037 |
| BclI | TGATCA | 1 cut(s) | 1147 |
| BcnI | CCSGG | 1 cut(s) | 897 |
| BcoDI | GTCTC | 5 cut(s) | 35, 681, 753, 1173, 1682 |
| BfaI | CTAG | 6 cut(s) | 816, 888, 1244, 1503, 1683, 1935 |
| BfmI | CTRYAG | 1 cut(s) | 2010 |
| BfoI | RGCGCY | 1 cut(s) | 2071 |
| BfrI | CTTAAG | 2 cut(s) | 1277, 1546 |
| BfuAI | ACCTGC | 1 cut(s) | 641 |
| BfuI | GTATCC | 1 cut(s) | 1037 |
| BisI | GCNGC | 7 cut(s) | 653, 860, 1017, 1661, 1800, 1932, 2013 |
| BlsI | GCNGC | 7 cut(s) | 654, 861, 1018, 1662, 1801, 1933, 2014 |
| Bme1390I | CCNGG | 3 cut(s) | 156, 897, 1234 |
| Bme18I | GGWCC | 2 cut(s) | 1382, 1602 |
| BmgT120I | GGNCC | 2 cut(s) | 1382, 1602 |
| BmiI | GGNNCC | 3 cut(s) | 282, 1824, 2069 |
| BmrFI | CCNGG | 3 cut(s) | 156, 897, 1234 |
| BmsI | GCATC | 3 cut(s) | 865, 1003, 1918 |
| Bpu14I | TTCGAA | 1 cut(s) | 1999 |
| BpuEI | CTTGAG | 3 cut(s) | 160, 496, 713 |
| BpuMI | CCSGG | 1 cut(s) | 897 |
| BsaAI | YACGTR | 2 cut(s) | 30, 1882 |
| BsaHI | GRCGYC | 1 cut(s) | 2068 |
| BsaI | GGTCTC | 1 cut(s) | 681 |
| BsaJI | CCNNGG | 3 cut(s) | 154, 829, 1233 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 289, 319, 1556, 1586, 1619, 1649 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 290, 1279 |
| Bse118I | RCCGGY | 1 cut(s) | 1983 |
| Bse1I | ACTGG | 2 cut(s) | 484, 1066 |
| Bse3DI | GCAATG | 1 cut(s) | 1438 |
| BseBI | CCWGG | 2 cut(s) | 156, 1234 |
| BseDI | CCNNGG | 3 cut(s) | 154, 829, 1233 |
| BseGI | GGATG | 5 cut(s) | 10, 337, 1018, 1894, 1976 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 290, 1279 |
| BseMI | GCAATG | 1 cut(s) | 1438 |
| BseMII | CTCAG | 2 cut(s) | 869, 1566 |
| BseNI | ACTGG | 2 cut(s) | 484, 1066 |
| BseRI | GAGGAG | 2 cut(s) | 1242, 2044 |
| BseSI | GKGCMC | 1 cut(s) | 29 |
| BseX3I | CGGCCG | 1 cut(s) | 1981 |
| BseXI | GCAGC | 5 cut(s) | 664, 846, 1786, 1943, 2024 |
| Bsh1236I | CGCG | 1 cut(s) | 573 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1984 |
| BshFI | GGCC | 3 cut(s) | 1983, 1987, 2049 |
| BshNI | GGYRCC | 2 cut(s) | 280, 2067 |
| BsiEI | CGRYCG | 1 cut(s) | 1984 |
| BsiHKAI | GWGCWC | 2 cut(s) | 29, 272 |
| BsiSI | CCGG | 3 cut(s) | 896, 1980, 1984 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 290, 1279 |
| BsmAI | GTCTC | 5 cut(s) | 35, 681, 753, 1173, 1682 |
| BsmBI | CGTCTC | 1 cut(s) | 35 |
| BsmI | GAATGC | 3 cut(s) | 760, 993, 1228 |
| BsnI | GGCC | 3 cut(s) | 1983, 1987, 2049 |
| Bso31I | GGTCTC | 1 cut(s) | 681 |
| Bsp119I | TTCGAA | 1 cut(s) | 1999 |
| Bsp1286I | GDGCHC | 3 cut(s) | 29, 272, 902 |
| Bsp143I | GATC | 7 cut(s) | 45, 415, 922, 1147, 1201, 1406, 1729 |
| Bsp19I | CCATGG | 1 cut(s) | 829 |
| BspACI | CCGC | 7 cut(s) | 998, 1016, 1172, 1212, 1385, 1660, 1724 |
| BspANI | GGCC | 3 cut(s) | 1983, 1987, 2049 |
| BspCNI | CTCAG | 2 cut(s) | 868, 1567 |
| BspFNI | CGCG | 1 cut(s) | 573 |
| BspHI | TCATGA | 2 cut(s) | 385, 835 |
| BspLI | GGNNCC | 3 cut(s) | 282, 1824, 2069 |
| BspMAI | CTGCAG | 1 cut(s) | 2014 |
| BspMI | ACCTGC | 1 cut(s) | 641 |
| BspPI | GGATC | 2 cut(s) | 423, 917 |
| BspT104I | TTCGAA | 1 cut(s) | 1999 |
| BspT107I | GGYRCC | 2 cut(s) | 280, 2067 |
| BspTI | CTTAAG | 2 cut(s) | 1277, 1546 |
| BspTNI | GGTCTC | 1 cut(s) | 681 |
| BsrDI | GCAATG | 1 cut(s) | 1438 |
| BsrFI | RCCGGY | 1 cut(s) | 1983 |
| BsrI | ACTGG | 2 cut(s) | 484, 1066 |
| BssAI | RCCGGY | 1 cut(s) | 1983 |
| BssECI | CCNNGG | 3 cut(s) | 154, 829, 1233 |
| BssMI | GATC | 7 cut(s) | 45, 415, 922, 1147, 1201, 1406, 1729 |
| BssNI | GRCGYC | 1 cut(s) | 2068 |
| BssSI | CACGAG | 1 cut(s) | 2026 |
| BssT1I | CCWWGG | 1 cut(s) | 829 |
| Bst2BI | CACGAG | 1 cut(s) | 2026 |
| Bst2UI | CCWGG | 2 cut(s) | 156, 1234 |
| Bst4CI | ACNGT | 2 cut(s) | 1218, 1693 |
| Bst6I | CTCTTC | 2 cut(s) | 1022, 1389 |
| BstACI | GRCGYC | 1 cut(s) | 2068 |
| BstAFI | CTTAAG | 2 cut(s) | 1277, 1546 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 533 |
| BstBAI | YACGTR | 2 cut(s) | 30, 1882 |
| BstBI | TTCGAA | 1 cut(s) | 1999 |
| BstC8I | GCNNGC | 3 cut(s) | 1342, 1591, 1985 |
| BstDEI | CTNAG | 4 cut(s) | 537, 647, 855, 1575 |
| BstDSI | CCRYGG | 1 cut(s) | 829 |
| BstF5I | GGATG | 5 cut(s) | 10, 337, 1018, 1894, 1976 |
| BstFNI | CGCG | 1 cut(s) | 573 |
| BstH2I | RGCGCY | 1 cut(s) | 2071 |
| BstHHI | GCGC | 2 cut(s) | 575, 2070 |
| BstKTI | GATC | 7 cut(s) | 48, 418, 925, 1150, 1204, 1409, 1732 |
| BstMAI | GTCTC | 5 cut(s) | 35, 681, 753, 1173, 1682 |
| BstMBI | GATC | 7 cut(s) | 45, 415, 922, 1147, 1201, 1406, 1729 |
| BstMCI | CGRYCG | 1 cut(s) | 1984 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 533, 821, 906, 978, 1411, 1799 |
| BstNI | CCWGG | 2 cut(s) | 156, 1234 |
| BstNSI | RCATGY | 3 cut(s) | 1051, 1593, 1793 |
| BstSCI | CCNGG | 3 cut(s) | 154, 895, 1232 |
| BstSFI | CTRYAG | 1 cut(s) | 2010 |
| BstSLI | GKGCMC | 1 cut(s) | 29 |
| BstUI | CGCG | 1 cut(s) | 573 |
| BstV1I | GCAGC | 5 cut(s) | 664, 846, 1786, 1943, 2024 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1814 |
| BstZI | CGGCCG | 1 cut(s) | 1981 |
| BsuI | GTATCC | 1 cut(s) | 1037 |
| BsuRI | GGCC | 3 cut(s) | 1983, 1987, 2049 |
| BtgI | CCRYGG | 1 cut(s) | 829 |
| BtsCI | GGATG | 5 cut(s) | 10, 337, 1018, 1894, 1976 |
| BtsIMutI | CAGTG | 1 cut(s) | 1725 |
| BveI | ACCTGC | 1 cut(s) | 641 |
| Cac8I | GCNNGC | 3 cut(s) | 1342, 1591, 1985 |
| CciI | TCATGA | 2 cut(s) | 385, 835 |
| CfoI | GCGC | 2 cut(s) | 575, 2070 |
| Cfr10I | RCCGGY | 1 cut(s) | 1983 |
| Cfr13I | GGNCC | 2 cut(s) | 1382, 1602 |
| Csp6I | GTAC | 2 cut(s) | 496, 2088 |
| CviQI | GTAC | 2 cut(s) | 496, 2088 |
| DdeI | CTNAG | 4 cut(s) | 537, 647, 855, 1575 |
| DinI | GGCGCC | 1 cut(s) | 2069 |
| DpnI | GATC | 7 cut(s) | 47, 417, 924, 1149, 1203, 1408, 1731 |
| DpnII | GATC | 7 cut(s) | 45, 415, 922, 1147, 1201, 1406, 1729 |
| DraI | TTTAAA | 1 cut(s) | 226 |
| EaeI | YGGCCR | 3 cut(s) | 1981, 1985, 2047 |
| EagI | CGGCCG | 1 cut(s) | 1981 |
| Eam1104I | CTCTTC | 2 cut(s) | 1022, 1389 |
| EarI | CTCTTC | 2 cut(s) | 1022, 1389 |
| EciI | GGCGGA | 1 cut(s) | 1374 |
| EclXI | CGGCCG | 1 cut(s) | 1981 |
| Eco130I | CCWWGG | 1 cut(s) | 829 |
| Eco24I | GRGCYC | 1 cut(s) | 902 |
| Eco31I | GGTCTC | 1 cut(s) | 681 |
| Eco47I | GGWCC | 2 cut(s) | 1382, 1602 |
| Eco52I | CGGCCG | 1 cut(s) | 1981 |
| EcoRI | GAATTC | 1 cut(s) | 232 |
| EcoRII | CCWGG | 2 cut(s) | 154, 1232 |
| EcoT14I | CCWWGG | 1 cut(s) | 829 |
| EcoT22I | ATGCAT | 2 cut(s) | 995, 1438 |
| EcoT38I | GRGCYC | 1 cut(s) | 902 |
| EgeI | GGCGCC | 1 cut(s) | 2069 |
| EheI | GGCGCC | 1 cut(s) | 2069 |
| ErhI | CCWWGG | 1 cut(s) | 829 |
| Esp3I | CGTCTC | 1 cut(s) | 35 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 630, 662 |
| FbaI | TGATCA | 1 cut(s) | 1147 |
| Fnu4HI | GCNGC | 7 cut(s) | 653, 860, 1017, 1661, 1800, 1932, 2013 |
| FokI | GGATG | 5 cut(s) | 17, 344, 1025, 1881, 1963 |
| FriOI | GRGCYC | 1 cut(s) | 902 |
| FseI | GGCCGGCC | 1 cut(s) | 1987 |
| Fsp4HI | GCNGC | 7 cut(s) | 653, 860, 1017, 1661, 1800, 1932, 2013 |
| FspBI | CTAG | 6 cut(s) | 816, 888, 1244, 1503, 1683, 1935 |
| GlaI | GCGC | 2 cut(s) | 574, 2069 |
| GluI | GCNGC | 7 cut(s) | 653, 860, 1017, 1661, 1800, 1932, 2013 |
| HaeII | RGCGCY | 1 cut(s) | 2071 |
| HaeIII | GGCC | 3 cut(s) | 1983, 1987, 2049 |
| HapII | CCGG | 3 cut(s) | 896, 1980, 1984 |
| HhaI | GCGC | 2 cut(s) | 575, 2070 |
| Hin1I | GRCGYC | 1 cut(s) | 2068 |
| Hin6I | GCGC | 2 cut(s) | 573, 2068 |
| HinP1I | GCGC | 2 cut(s) | 573, 2068 |
| HincII | GTYRAC | 1 cut(s) | 459 |
| HindII | GTYRAC | 1 cut(s) | 459 |
| HindIII | AAGCTT | 1 cut(s) | 665 |
| HinfI | GANTC | 6 cut(s) | 121, 257, 1112, 1247, 1484, 1874 |
| HpaII | CCGG | 3 cut(s) | 896, 1980, 1984 |
| HphI | GGTGA | 5 cut(s) | 262, 601, 1320, 1472, 2069 |
| Hpy166II | GTNNAC | 7 cut(s) | 27, 459, 498, 628, 1602, 1787, 2088 |
| Hpy188I | TCNGA | 6 cut(s) | 550, 694, 1117, 1576, 1711, 2102 |
| Hpy188III | TCNNGA | 4 cut(s) | 386, 836, 872, 1244 |
| Hpy8I | GTNNAC | 7 cut(s) | 27, 459, 498, 628, 1602, 1787, 2088 |
| HpyAV | CCTTC | 6 cut(s) | 422, 799, 971, 1370, 1535, 1576 |
| HpyCH4III | ACNGT | 2 cut(s) | 1218, 1693 |
| HpyCH4IV | ACGT | 5 cut(s) | 29, 74, 946, 1881, 2084 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 533, 821, 906, 978, 1411, 1799 |
| HpyF3I | CTNAG | 4 cut(s) | 537, 647, 855, 1575 |
| HpySE526I | ACGT | 5 cut(s) | 29, 74, 946, 1881, 2084 |
| Hsp92I | GRCGYC | 1 cut(s) | 2068 |
| HspAI | GCGC | 2 cut(s) | 573, 2068 |
| KasI | GGCGCC | 1 cut(s) | 2067 |
| KroI | GCCGGC | 1 cut(s) | 1983 |
| KroNI | GCCGGC | 1 cut(s) | 1985 |
| Ksp22I | TGATCA | 1 cut(s) | 1147 |
| Kzo9I | GATC | 7 cut(s) | 45, 415, 922, 1147, 1201, 1406, 1729 |
| LmnI | GCTCC | 2 cut(s) | 267, 370 |
| Lsp1109I | GCAGC | 5 cut(s) | 664, 846, 1786, 1943, 2024 |
| LweI | GCATC | 3 cut(s) | 865, 1003, 1918 |
| MaeI | CTAG | 6 cut(s) | 816, 888, 1244, 1503, 1683, 1935 |
| MaeII | ACGT | 5 cut(s) | 29, 74, 946, 1881, 2084 |
| MaeIII | GTNAC | 3 cut(s) | 842, 1186, 1835 |
| MalI | GATC | 7 cut(s) | 47, 417, 924, 1149, 1203, 1408, 1731 |
| MboI | GATC | 7 cut(s) | 45, 415, 922, 1147, 1201, 1406, 1729 |
| MboII | GAAGA | 9 cut(s) | 342, 592, 943, 1039, 1078, 1381, 1406, 1651, 1937 |
| MfeI | CAATTG | 1 cut(s) | 1495 |
| MhlI | GDGCHC | 3 cut(s) | 29, 272, 902 |
| Mly113I | GGCGCC | 1 cut(s) | 2068 |
| MlyI | GAGTC | 1 cut(s) | 1493 |
| MmeI | TCCRAC | 2 cut(s) | 1398, 1795 |
| Mph1103I | ATGCAT | 2 cut(s) | 995, 1438 |
| MroNI | GCCGGC | 1 cut(s) | 1983 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1398 |
| MslI | CAYNNNNRTG | 4 cut(s) | 32, 278, 834, 1780 |
| MspA1I | CMGCKG | 1 cut(s) | 859 |
| MspCI | CTTAAG | 2 cut(s) | 1277, 1546 |
| MspI | CCGG | 3 cut(s) | 896, 1980, 1984 |
| MspR9I | CCNGG | 3 cut(s) | 156, 897, 1234 |
| MunI | CAATTG | 1 cut(s) | 1495 |
| Mva1269I | GAATGC | 3 cut(s) | 760, 993, 1228 |
| MvaI | CCWGG | 2 cut(s) | 156, 1234 |
| MvnI | CGCG | 1 cut(s) | 573 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 533, 821, 906, 978, 1411, 1799 |
| NaeI | GCCGGC | 1 cut(s) | 1985 |
| NarI | GGCGCC | 1 cut(s) | 2068 |
| NciI | CCSGG | 1 cut(s) | 897 |
| NcoI | CCATGG | 1 cut(s) | 829 |
| NdeII | GATC | 7 cut(s) | 45, 415, 922, 1147, 1201, 1406, 1729 |
| NgoMIV | GCCGGC | 1 cut(s) | 1983 |
| NlaIV | GGNNCC | 3 cut(s) | 282, 1824, 2069 |
| NmeAIII | GCCGAG | 1 cut(s) | 1507 |
| NmuCI | GTSAC | 1 cut(s) | 1186 |
| NsiI | ATGCAT | 2 cut(s) | 995, 1438 |
| NspI | RCATGY | 3 cut(s) | 1051, 1593, 1793 |
| NspV | TTCGAA | 1 cut(s) | 1999 |
| PaeI | GCATGC | 1 cut(s) | 1593 |
| PagI | TCATGA | 2 cut(s) | 385, 835 |
| PaqCI | CACCTGC | 1 cut(s) | 641 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 943 |
| PctI | GAATGC | 3 cut(s) | 760, 993, 1228 |
| PdiI | GCCGGC | 1 cut(s) | 1985 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1398 |
| PfeI | GAWTC | 5 cut(s) | 121, 257, 1112, 1247, 1874 |
| PkrI | GCNGC | 7 cut(s) | 654, 861, 1018, 1662, 1801, 1933, 2014 |
| PleI | GAGTC | 1 cut(s) | 1492 |
| PluTI | GGCGCC | 1 cut(s) | 2071 |
| PpsI | GAGTC | 1 cut(s) | 1492 |
| Ppu21I | YACGTR | 2 cut(s) | 30, 1882 |
| PshBI | ATTAAT | 1 cut(s) | 1770 |
| PsiI | TTATAA | 2 cut(s) | 404, 786 |
| Psp1406I | AACGTT | 1 cut(s) | 946 |
| Psp6I | CCWGG | 2 cut(s) | 154, 1232 |
| PspGI | CCWGG | 2 cut(s) | 154, 1232 |
| PspN4I | GGNNCC | 3 cut(s) | 282, 1824, 2069 |
| PspPI | GGNCC | 2 cut(s) | 1382, 1602 |
| PstI | CTGCAG | 1 cut(s) | 2014 |
| PvuII | CAGCTG | 1 cut(s) | 859 |
| RigI | GGCCGGCC | 1 cut(s) | 1987 |
| RsaI | GTAC | 2 cut(s) | 497, 2089 |
| RsaNI | GTAC | 2 cut(s) | 496, 2088 |
| RseI | CAYNNNNRTG | 4 cut(s) | 32, 278, 834, 1780 |
| SatI | GCNGC | 7 cut(s) | 653, 860, 1017, 1661, 1800, 1932, 2013 |
| Sau3AI | GATC | 7 cut(s) | 45, 415, 922, 1147, 1201, 1406, 1729 |
| Sau96I | GGNCC | 2 cut(s) | 1382, 1602 |
| SchI | GAGTC | 1 cut(s) | 1493 |
| ScrFI | CCNGG | 3 cut(s) | 156, 897, 1234 |
| SduI | GDGCHC | 3 cut(s) | 29, 272, 902 |
| SfaNI | GCATC | 3 cut(s) | 865, 1003, 1918 |
| SfcI | CTRYAG | 1 cut(s) | 2010 |
| SfoI | GGCGCC | 1 cut(s) | 2069 |
| SfuI | TTCGAA | 1 cut(s) | 1999 |
| SinI | GGWCC | 2 cut(s) | 1382, 1602 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 32, 278, 834, 1780 |
| SmlI | CTYRAG | 5 cut(s) | 139, 511, 728, 1277, 1546 |
| SmoI | CTYRAG | 5 cut(s) | 139, 511, 728, 1277, 1546 |
| SphI | GCATGC | 1 cut(s) | 1593 |
| SsiI | CCGC | 7 cut(s) | 998, 1016, 1172, 1212, 1385, 1660, 1724 |
| SspDI | GGCGCC | 1 cut(s) | 2067 |
| SspMI | CTAG | 6 cut(s) | 816, 888, 1244, 1503, 1683, 1935 |
| StyD4I | CCNGG | 3 cut(s) | 154, 895, 1232 |
| StyI | CCWWGG | 1 cut(s) | 829 |
| TaaI | ACNGT | 2 cut(s) | 1218, 1693 |
| TaiI | ACGT | 5 cut(s) | 32, 77, 949, 1884, 2087 |
| TaqI | TCGA | 2 cut(s) | 1204, 1999 |
| TatI | WGTACW | 2 cut(s) | 495, 2087 |
| TauI | GCSGC | 2 cut(s) | 1019, 1663 |
| TfiI | GAWTC | 5 cut(s) | 121, 257, 1112, 1247, 1874 |
| TscAI | CASTG | 1 cut(s) | 1725 |
| TseFI | GTSAC | 1 cut(s) | 1186 |
| TseI | GCWGC | 5 cut(s) | 652, 859, 1799, 1931, 2012 |
| Tsp45I | GTSAC | 1 cut(s) | 1186 |
| TspGWI | ACGGA | 1 cut(s) | 517 |
| TspRI | CASTG | 1 cut(s) | 1725 |
| Vha464I | CTTAAG | 2 cut(s) | 1277, 1546 |
| VneI | GTGCAC | 1 cut(s) | 25 |
| VpaK11BI | GGWCC | 2 cut(s) | 1382, 1602 |
| VspI | ATTAAT | 1 cut(s) | 1770 |
| XapI | RAATTY | 4 cut(s) | 232, 443, 1285, 1307 |
| XbaI | TCTAGA | 1 cut(s) | 1243 |
| XceI | RCATGY | 3 cut(s) | 1051, 1593, 1793 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 836 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1398 |
| XspI | CTAG | 6 cut(s) | 816, 888, 1244, 1503, 1683, 1935 |
| Zsp2I | ATGCAT | 2 cut(s) | 995, 1438 |