isoform X1
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 2 cut(s) | 260, 309 |
| AccI | GTMKAC | 2 cut(s) | 209, 408 |
| AciI | CCGC | 4 cut(s) | 238, 452, 871, 976 |
| AclI | AACGTT | 1 cut(s) | 478 |
| AdeI | CACNNNGTG | 1 cut(s) | 118 |
| AfaI | GTAC | 1 cut(s) | 728 |
| AfeI | AGCGCT | 1 cut(s) | 64 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 855 |
| AgsI | TTSAA | 9 cut(s) | 8, 159, 232, 520, 564, 748, 810, 877, 896 |
| AjnI | CCWGG | 2 cut(s) | 568, 850 |
| AluBI | AGCT | 5 cut(s) | 254, 330, 756, 904, 954 |
| AluI | AGCT | 5 cut(s) | 254, 330, 756, 904, 954 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 698 |
| Aor51HI | AGCGCT | 1 cut(s) | 64 |
| AoxI | GGCC | 3 cut(s) | 673, 845, 857 |
| ApeKI | GCWGC | 4 cut(s) | 330, 680, 692, 954 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 872 |
| AspA2I | CCTAGG | 1 cut(s) | 860 |
| AspLEI | GCGC | 1 cut(s) | 65 |
| AspS9I | GGNCC | 3 cut(s) | 483, 846, 917 |
| AsuHPI | GGTGA | 1 cut(s) | 877 |
| AvaII | GGWCC | 2 cut(s) | 483, 917 |
| AvrII | CCTAGG | 1 cut(s) | 860 |
| BaeGI | GKGCMC | 1 cut(s) | 938 |
| BanI | GGYRCC | 2 cut(s) | 260, 309 |
| BbsI | GAAGAC | 1 cut(s) | 789 |
| BbvI | GCAGC | 4 cut(s) | 317, 667, 704, 941 |
| BccI | CCATC | 3 cut(s) | 442, 523, 780 |
| BceAI | ACGGC | 2 cut(s) | 297, 688 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 189, 223 |
| BciT130I | CCWGG | 2 cut(s) | 570, 852 |
| BfaI | CTAG | 2 cut(s) | 327, 861 |
| BfmI | CTRYAG | 1 cut(s) | 409 |
| BfoI | RGCGCY | 1 cut(s) | 66 |
| BisI | GCNGC | 4 cut(s) | 331, 681, 693, 955 |
| BlnI | CCTAGG | 1 cut(s) | 860 |
| BlsI | GCNGC | 4 cut(s) | 332, 682, 694, 956 |
| BmcAI | AGTACT | 1 cut(s) | 728 |
| Bme1390I | CCNGG | 2 cut(s) | 570, 852 |
| Bme18I | GGWCC | 2 cut(s) | 483, 917 |
| BmgT120I | GGNCC | 3 cut(s) | 483, 846, 917 |
| BmiI | GGNNCC | 3 cut(s) | 262, 311, 848 |
| BmrFI | CCNGG | 2 cut(s) | 570, 852 |
| BmsI | GCATC | 1 cut(s) | 390 |
| BpiI | GAAGAC | 1 cut(s) | 789 |
| BpmI | CTGGAG | 2 cut(s) | 276, 591 |
| BsaJI | CCNNGG | 3 cut(s) | 850, 851, 860 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 500, 530 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 855 |
| Bse1I | ACTGG | 2 cut(s) | 132, 404 |
| BseBI | CCWGG | 2 cut(s) | 570, 852 |
| BseDI | CCNNGG | 3 cut(s) | 850, 851, 860 |
| BseGI | GGATG | 1 cut(s) | 772 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 855 |
| BseMII | CTCAG | 1 cut(s) | 227 |
| BseNI | ACTGG | 2 cut(s) | 132, 404 |
| BseSI | GKGCMC | 1 cut(s) | 938 |
| BseXI | GCAGC | 4 cut(s) | 317, 667, 704, 941 |
| BsgI | GTGCAG | 2 cut(s) | 545, 940 |
| BshFI | GGCC | 3 cut(s) | 675, 847, 859 |
| BshNI | GGYRCC | 2 cut(s) | 260, 309 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 855 |
| BsnI | GGCC | 3 cut(s) | 675, 847, 859 |
| Bsp1286I | GDGCHC | 1 cut(s) | 938 |
| Bsp143I | GATC | 4 cut(s) | 40, 587, 619, 648 |
| BspACI | CCGC | 4 cut(s) | 238, 452, 871, 976 |
| BspANI | GGCC | 3 cut(s) | 675, 847, 859 |
| BspCNI | CTCAG | 1 cut(s) | 226 |
| BspLI | GGNNCC | 3 cut(s) | 262, 311, 848 |
| BspQI | GCTCTTC | 1 cut(s) | 746 |
| BspT107I | GGYRCC | 2 cut(s) | 260, 309 |
| BsrI | ACTGG | 2 cut(s) | 132, 404 |
| BssECI | CCNNGG | 3 cut(s) | 850, 851, 860 |
| BssMI | GATC | 4 cut(s) | 40, 587, 619, 648 |
| BssT1I | CCWWGG | 1 cut(s) | 860 |
| Bst2UI | CCWGG | 2 cut(s) | 570, 852 |
| Bst4CI | ACNGT | 2 cut(s) | 227, 413 |
| Bst6I | CTCTTC | 2 cut(s) | 746, 836 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 128 |
| BstDEI | CTNAG | 2 cut(s) | 213, 245 |
| BstF5I | GGATG | 1 cut(s) | 772 |
| BstH2I | RGCGCY | 1 cut(s) | 66 |
| BstHHI | GCGC | 1 cut(s) | 65 |
| BstKTI | GATC | 4 cut(s) | 43, 590, 622, 651 |
| BstMBI | GATC | 4 cut(s) | 40, 587, 619, 648 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 128, 260, 400, 689 |
| BstNI | CCWGG | 2 cut(s) | 570, 852 |
| BstSCI | CCNGG | 2 cut(s) | 568, 850 |
| BstSFI | CTRYAG | 1 cut(s) | 409 |
| BstSLI | GKGCMC | 1 cut(s) | 938 |
| BstV1I | GCAGC | 4 cut(s) | 317, 667, 704, 941 |
| BstV2I | GAAGAC | 1 cut(s) | 789 |
| BsuRI | GGCC | 3 cut(s) | 675, 847, 859 |
| BtsCI | GGATG | 1 cut(s) | 772 |
| BtsIMutI | CAGTG | 2 cut(s) | 556, 957 |
| CaiI | CAGNNNCTG | 1 cut(s) | 698 |
| CfoI | GCGC | 1 cut(s) | 65 |
| Cfr13I | GGNCC | 3 cut(s) | 483, 846, 917 |
| Csp6I | GTAC | 1 cut(s) | 727 |
| CviAII | CATG | 3 cut(s) | 623, 633, 734 |
| CviQI | GTAC | 1 cut(s) | 727 |
| DdeI | CTNAG | 2 cut(s) | 213, 245 |
| DpnI | GATC | 4 cut(s) | 42, 589, 621, 650 |
| DpnII | GATC | 4 cut(s) | 40, 587, 619, 648 |
| DraIII | CACNNNGTG | 1 cut(s) | 118 |
| Eam1104I | CTCTTC | 2 cut(s) | 746, 836 |
| EarI | CTCTTC | 2 cut(s) | 746, 836 |
| Eco130I | CCWWGG | 1 cut(s) | 860 |
| Eco147I | AGGCCT | 1 cut(s) | 859 |
| Eco47I | GGWCC | 2 cut(s) | 483, 917 |
| Eco47III | AGCGCT | 1 cut(s) | 64 |
| EcoO109I | RGGNCCY | 1 cut(s) | 846 |
| EcoRII | CCWGG | 2 cut(s) | 568, 850 |
| EcoT14I | CCWWGG | 1 cut(s) | 860 |
| ErhI | CCWWGG | 1 cut(s) | 860 |
| FaeI | CATG | 3 cut(s) | 626, 636, 737 |
| FatI | CATG | 3 cut(s) | 622, 632, 733 |
| FauI | CCCGC | 1 cut(s) | 445 |
| FauNDI | CATATG | 1 cut(s) | 601 |
| FblI | GTMKAC | 2 cut(s) | 209, 408 |
| Fnu4HI | GCNGC | 4 cut(s) | 331, 681, 693, 955 |
| FokI | GGATG | 1 cut(s) | 759 |
| Fsp4HI | GCNGC | 4 cut(s) | 331, 681, 693, 955 |
| FspBI | CTAG | 2 cut(s) | 327, 861 |
| GlaI | GCGC | 1 cut(s) | 64 |
| GluI | GCNGC | 4 cut(s) | 331, 681, 693, 955 |
| GsuI | CTGGAG | 2 cut(s) | 276, 591 |
| HaeII | RGCGCY | 1 cut(s) | 66 |
| HaeIII | GGCC | 3 cut(s) | 675, 847, 859 |
| HhaI | GCGC | 1 cut(s) | 65 |
| Hin1II | CATG | 3 cut(s) | 626, 636, 737 |
| Hin6I | GCGC | 1 cut(s) | 63 |
| HinP1I | GCGC | 1 cut(s) | 63 |
| HincII | GTYRAC | 2 cut(s) | 210, 610 |
| HindII | GTYRAC | 2 cut(s) | 210, 610 |
| HinfI | GANTC | 4 cut(s) | 211, 365, 806, 907 |
| HphI | GGTGA | 1 cut(s) | 877 |
| Hpy166II | GTNNAC | 3 cut(s) | 210, 409, 610 |
| Hpy188I | TCNGA | 7 cut(s) | 216, 289, 592, 700, 777, 805, 817 |
| Hpy188III | TCNNGA | 1 cut(s) | 748 |
| Hpy8I | GTNNAC | 3 cut(s) | 210, 409, 610 |
| Hpy99I | CGWCG | 2 cut(s) | 211, 546 |
| HpyAV | CCTTC | 2 cut(s) | 211, 514 |
| HpyCH4III | ACNGT | 2 cut(s) | 227, 413 |
| HpyCH4IV | ACGT | 1 cut(s) | 478 |
| HpyCH4V | TGCA | 5 cut(s) | 317, 386, 526, 683, 957 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 128, 260, 400, 689 |
| HpyF3I | CTNAG | 2 cut(s) | 213, 245 |
| HpySE526I | ACGT | 1 cut(s) | 478 |
| Hsp92II | CATG | 3 cut(s) | 626, 636, 737 |
| HspAI | GCGC | 1 cut(s) | 63 |
| Kzo9I | GATC | 4 cut(s) | 40, 587, 619, 648 |
| LguI | GCTCTTC | 1 cut(s) | 746 |
| Lsp1109I | GCAGC | 4 cut(s) | 317, 667, 704, 941 |
| LweI | GCATC | 1 cut(s) | 390 |
| MaeI | CTAG | 2 cut(s) | 327, 861 |
| MaeII | ACGT | 1 cut(s) | 478 |
| MaeIII | GTNAC | 1 cut(s) | 104 |
| MalI | GATC | 4 cut(s) | 42, 589, 621, 650 |
| MboI | GATC | 4 cut(s) | 40, 587, 619, 648 |
| MboII | GAAGA | 6 cut(s) | 182, 479, 763, 789, 792, 853 |
| MfeI | CAATTG | 2 cut(s) | 387, 652 |
| MhlI | GDGCHC | 1 cut(s) | 938 |
| MluCI | AATT | 9 cut(s) | 154, 232, 290, 304, 342, 387, 432, 652, 760 |
| MlyI | GAGTC | 1 cut(s) | 205 |
| MmeI | TCCRAC | 3 cut(s) | 31, 461, 865 |
| MroXI | GAANNNNTTC | 1 cut(s) | 872 |
| MseI | TTAA | 4 cut(s) | 192, 372, 435, 639 |
| MspA1I | CMGCKG | 1 cut(s) | 976 |
| MspR9I | CCNGG | 2 cut(s) | 570, 852 |
| MunI | CAATTG | 2 cut(s) | 387, 652 |
| MvaI | CCWGG | 2 cut(s) | 570, 852 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 128, 260, 400, 689 |
| NdeI | CATATG | 1 cut(s) | 601 |
| NdeII | GATC | 4 cut(s) | 40, 587, 619, 648 |
| NlaIII | CATG | 3 cut(s) | 626, 636, 737 |
| NlaIV | GGNNCC | 3 cut(s) | 262, 311, 848 |
| PasI | CCCWGGG | 1 cut(s) | 851 |
| PceI | AGGCCT | 1 cut(s) | 859 |
| PciSI | GCTCTTC | 1 cut(s) | 746 |
| PdmI | GAANNNNTTC | 1 cut(s) | 872 |
| PfeI | GAWTC | 3 cut(s) | 365, 806, 907 |
| PfoI | TCCNGGA | 1 cut(s) | 568 |
| PkrI | GCNGC | 4 cut(s) | 332, 682, 694, 956 |
| PleI | GAGTC | 1 cut(s) | 205 |
| PpsI | GAGTC | 1 cut(s) | 205 |
| Psp1406I | AACGTT | 1 cut(s) | 478 |
| Psp6I | CCWGG | 2 cut(s) | 568, 850 |
| PspGI | CCWGG | 2 cut(s) | 568, 850 |
| PspN4I | GGNNCC | 3 cut(s) | 262, 311, 848 |
| PspPI | GGNCC | 3 cut(s) | 483, 846, 917 |
| PstNI | CAGNNNCTG | 1 cut(s) | 698 |
| RsaI | GTAC | 1 cut(s) | 728 |
| RsaNI | GTAC | 1 cut(s) | 727 |
| SalI | GTCGAC | 1 cut(s) | 208 |
| SapI | GCTCTTC | 1 cut(s) | 746 |
| SaqAI | TTAA | 4 cut(s) | 192, 372, 435, 639 |
| SatI | GCNGC | 4 cut(s) | 331, 681, 693, 955 |
| Sau3AI | GATC | 4 cut(s) | 40, 587, 619, 648 |
| Sau96I | GGNCC | 3 cut(s) | 483, 846, 917 |
| ScaI | AGTACT | 1 cut(s) | 728 |
| SchI | GAGTC | 1 cut(s) | 205 |
| ScrFI | CCNGG | 2 cut(s) | 570, 852 |
| SduI | GDGCHC | 1 cut(s) | 938 |
| SfaNI | GCATC | 1 cut(s) | 390 |
| SfcI | CTRYAG | 1 cut(s) | 409 |
| SinI | GGWCC | 2 cut(s) | 483, 917 |
| SmlI | CTYRAG | 1 cut(s) | 12 |
| SmoI | CTYRAG | 1 cut(s) | 12 |
| Sse9I | AATT | 9 cut(s) | 154, 232, 290, 304, 342, 387, 432, 652, 760 |
| SseBI | AGGCCT | 1 cut(s) | 859 |
| SsiI | CCGC | 4 cut(s) | 238, 452, 871, 976 |
| SspMI | CTAG | 2 cut(s) | 327, 861 |
| StuI | AGGCCT | 1 cut(s) | 859 |
| StyD4I | CCNGG | 2 cut(s) | 568, 850 |
| StyI | CCWWGG | 1 cut(s) | 860 |
| TaaI | ACNGT | 2 cut(s) | 227, 413 |
| TaiI | ACGT | 1 cut(s) | 481 |
| TaqI | TCGA | 3 cut(s) | 69, 209, 586 |
| TasI | AATT | 9 cut(s) | 154, 232, 290, 304, 342, 387, 432, 652, 760 |
| TatI | WGTACW | 1 cut(s) | 726 |
| TfiI | GAWTC | 3 cut(s) | 365, 806, 907 |
| Tru1I | TTAA | 4 cut(s) | 192, 372, 435, 639 |
| Tru9I | TTAA | 4 cut(s) | 192, 372, 435, 639 |
| TscAI | CASTG | 2 cut(s) | 556, 964 |
| TseI | GCWGC | 4 cut(s) | 330, 680, 692, 954 |
| TspDTI | ATGAA | 3 cut(s) | 588, 621, 722 |
| TspRI | CASTG | 2 cut(s) | 556, 964 |
| VpaK11BI | GGWCC | 2 cut(s) | 483, 917 |
| XmaJI | CCTAGG | 1 cut(s) | 860 |
| XmiI | GTMKAC | 2 cut(s) | 209, 408 |
| XmnI | GAANNNNTTC | 1 cut(s) | 872 |
| XspI | CTAG | 2 cut(s) | 327, 861 |
| ZrmI | AGTACT | 1 cut(s) | 728 |