isoform X1
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 557 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 298 |
| Acc36I | ACCTGC | 1 cut(s) | 557 |
| AccB1I | GGYRCC | 2 cut(s) | 1337, 1386 |
| AccI | GTMKAC | 2 cut(s) | 1286, 1485 |
| AciI | CCGC | 3 cut(s) | 1315, 1529, 1948 |
| AclI | AACGTT | 2 cut(s) | 935, 1555 |
| AcuI | CTGAAG | 2 cut(s) | 56, 300 |
| AdeI | CACNNNGTG | 1 cut(s) | 1195 |
| AfaI | GTAC | 2 cut(s) | 37, 1805 |
| AfeI | AGCGCT | 1 cut(s) | 1141 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 1932 |
| AflIII | ACRYGT | 1 cut(s) | 762 |
| AjnI | CCWGG | 4 cut(s) | 85, 146, 1645, 1927 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 199, 231 |
| Alw21I | GWGCWC | 1 cut(s) | 363 |
| Alw26I | GTCTC | 1 cut(s) | 1028 |
| AlwNI | CAGNNNCTG | 4 cut(s) | 133, 967, 1775, 1892 |
| Aor51HI | AGCGCT | 1 cut(s) | 1141 |
| AoxI | GGCC | 4 cut(s) | 729, 1750, 1922, 1934 |
| ApeKI | GCWGC | 4 cut(s) | 353, 1407, 1757, 1769 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 214, 1949 |
| AspA2I | CCTAGG | 1 cut(s) | 1937 |
| AspLEI | GCGC | 2 cut(s) | 353, 1142 |
| AspS9I | GGNCC | 5 cut(s) | 430, 591, 729, 1560, 1923 |
| AsuC2I | CCSGG | 1 cut(s) | 813 |
| AsuHPI | GGTGA | 2 cut(s) | 275, 1954 |
| AvaII | GGWCC | 3 cut(s) | 430, 591, 1560 |
| AvrII | CCTAGG | 1 cut(s) | 1937 |
| BanI | GGYRCC | 2 cut(s) | 1337, 1386 |
| BanII | GRGCYC | 1 cut(s) | 363 |
| BbsI | GAAGAC | 2 cut(s) | 30, 1866 |
| Bbv12I | GWGCWC | 1 cut(s) | 363 |
| BbvI | GCAGC | 4 cut(s) | 365, 1394, 1744, 1781 |
| BccI | CCATC | 5 cut(s) | 850, 923, 1519, 1600, 1857 |
| BceAI | ACGGC | 2 cut(s) | 1374, 1765 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1266, 1300 |
| BciT130I | CCWGG | 4 cut(s) | 87, 148, 1647, 1929 |
| BcnI | CCSGG | 1 cut(s) | 813 |
| BcoDI | GTCTC | 1 cut(s) | 1028 |
| BfaI | CTAG | 4 cut(s) | 161, 1010, 1404, 1938 |
| BfmI | CTRYAG | 1 cut(s) | 1486 |
| BfoI | RGCGCY | 1 cut(s) | 1143 |
| BfuAI | ACCTGC | 1 cut(s) | 557 |
| BisI | GCNGC | 4 cut(s) | 354, 1408, 1758, 1770 |
| BlnI | CCTAGG | 1 cut(s) | 1937 |
| BlpI | GCTNAGC | 1 cut(s) | 357 |
| BlsI | GCNGC | 4 cut(s) | 355, 1409, 1759, 1771 |
| BmcAI | AGTACT | 1 cut(s) | 1805 |
| Bme1390I | CCNGG | 5 cut(s) | 87, 148, 813, 1647, 1929 |
| Bme18I | GGWCC | 3 cut(s) | 430, 591, 1560 |
| BmgT120I | GGNCC | 5 cut(s) | 430, 591, 729, 1560, 1923 |
| BmiI | GGNNCC | 5 cut(s) | 592, 751, 1339, 1388, 1925 |
| BmrFI | CCNGG | 5 cut(s) | 87, 148, 813, 1647, 1929 |
| BmsI | GCATC | 6 cut(s) | 120, 256, 733, 745, 1030, 1467 |
| BpiI | GAAGAC | 2 cut(s) | 30, 1866 |
| BpmI | CTGGAG | 2 cut(s) | 1353, 1668 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 357 |
| BpuEI | CTTGAG | 1 cut(s) | 1074 |
| BpuMI | CCSGG | 1 cut(s) | 813 |
| BsaJI | CCNNGG | 7 cut(s) | 594, 650, 732, 811, 1927, 1928, 1937 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 199, 229, 873, 903, 1577, 1607 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 1932 |
| Bse1I | ACTGG | 5 cut(s) | 914, 982, 1052, 1209, 1481 |
| Bse3DI | GCAATG | 1 cut(s) | 612 |
| BseBI | CCWGG | 4 cut(s) | 87, 148, 1647, 1929 |
| BseDI | CCNNGG | 7 cut(s) | 594, 650, 732, 811, 1927, 1928, 1937 |
| BseGI | GGATG | 1 cut(s) | 1849 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 1932 |
| BseMI | GCAATG | 1 cut(s) | 612 |
| BseMII | CTCAG | 4 cut(s) | 348, 388, 407, 1304 |
| BseNI | ACTGG | 5 cut(s) | 914, 982, 1052, 1209, 1481 |
| BseXI | GCAGC | 4 cut(s) | 365, 1394, 1744, 1781 |
| BsgI | GTGCAG | 1 cut(s) | 1622 |
| BshFI | GGCC | 4 cut(s) | 731, 1752, 1924, 1936 |
| BshNI | GGYRCC | 2 cut(s) | 1337, 1386 |
| BsiHKAI | GWGCWC | 1 cut(s) | 363 |
| BsiSI | CCGG | 1 cut(s) | 813 |
| BslFI | GGGAC | 1 cut(s) | 972 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 1932 |
| BsmAI | GTCTC | 1 cut(s) | 1028 |
| BsmFI | GGGAC | 1 cut(s) | 972 |
| BsmI | GAATGC | 1 cut(s) | 269 |
| BsnI | GGCC | 4 cut(s) | 731, 1752, 1924, 1936 |
| Bsp1286I | GDGCHC | 1 cut(s) | 363 |
| Bsp143I | GATC | 6 cut(s) | 115, 424, 1117, 1664, 1696, 1725 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 357 |
| BspACI | CCGC | 3 cut(s) | 1315, 1529, 1948 |
| BspANI | GGCC | 4 cut(s) | 731, 1752, 1924, 1936 |
| BspCNI | CTCAG | 4 cut(s) | 349, 387, 408, 1303 |
| BspLI | GGNNCC | 5 cut(s) | 592, 751, 1339, 1388, 1925 |
| BspMI | ACCTGC | 1 cut(s) | 557 |
| BspQI | GCTCTTC | 2 cut(s) | 823, 1823 |
| BspT107I | GGYRCC | 2 cut(s) | 1337, 1386 |
| BsrDI | GCAATG | 1 cut(s) | 612 |
| BsrI | ACTGG | 5 cut(s) | 914, 982, 1052, 1209, 1481 |
| BssECI | CCNNGG | 7 cut(s) | 594, 650, 732, 811, 1927, 1928, 1937 |
| BssMI | GATC | 6 cut(s) | 115, 424, 1117, 1664, 1696, 1725 |
| BssT1I | CCWWGG | 4 cut(s) | 594, 650, 732, 1937 |
| Bst2UI | CCWGG | 4 cut(s) | 87, 148, 1647, 1929 |
| Bst4CI | ACNGT | 5 cut(s) | 215, 434, 1304, 1490, 1838 |
| Bst6I | CTCTTC | 3 cut(s) | 823, 1823, 1913 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 449, 1205 |
| BstDEI | CTNAG | 5 cut(s) | 357, 374, 416, 1290, 1322 |
| BstF5I | GGATG | 1 cut(s) | 1849 |
| BstH2I | RGCGCY | 1 cut(s) | 1143 |
| BstHHI | GCGC | 2 cut(s) | 353, 1142 |
| BstKTI | GATC | 6 cut(s) | 118, 427, 1120, 1667, 1699, 1728 |
| BstMAI | GTCTC | 1 cut(s) | 1028 |
| BstMBI | GATC | 6 cut(s) | 115, 424, 1117, 1664, 1696, 1725 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 449, 716, 737, 1205, 1337, 1477, 1766 |
| BstNI | CCWGG | 4 cut(s) | 87, 148, 1647, 1929 |
| BstSCI | CCNGG | 5 cut(s) | 85, 146, 811, 1645, 1927 |
| BstSFI | CTRYAG | 1 cut(s) | 1486 |
| BstV1I | GCAGC | 4 cut(s) | 365, 1394, 1744, 1781 |
| BstV2I | GAAGAC | 2 cut(s) | 30, 1866 |
| BsuRI | GGCC | 4 cut(s) | 731, 1752, 1924, 1936 |
| BtsCI | GGATG | 1 cut(s) | 1849 |
| BtsIMutI | CAGTG | 2 cut(s) | 921, 1633 |
| BveI | ACCTGC | 1 cut(s) | 557 |
| CaiI | CAGNNNCTG | 4 cut(s) | 133, 967, 1775, 1892 |
| CfoI | GCGC | 2 cut(s) | 353, 1142 |
| Cfr13I | GGNCC | 5 cut(s) | 430, 591, 729, 1560, 1923 |
| Csp6I | GTAC | 2 cut(s) | 36, 1804 |
| CviAII | CATG | 5 cut(s) | 347, 440, 1700, 1710, 1811 |
| CviQI | GTAC | 2 cut(s) | 36, 1804 |
| DdeI | CTNAG | 5 cut(s) | 357, 374, 416, 1290, 1322 |
| DpnI | GATC | 6 cut(s) | 117, 426, 1119, 1666, 1698, 1727 |
| DpnII | GATC | 6 cut(s) | 115, 424, 1117, 1664, 1696, 1725 |
| DraI | TTTAAA | 2 cut(s) | 186, 673 |
| DraIII | CACNNNGTG | 1 cut(s) | 1195 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 298 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 298 |
| Eam1104I | CTCTTC | 3 cut(s) | 823, 1823, 1913 |
| EarI | CTCTTC | 3 cut(s) | 823, 1823, 1913 |
| Ecl136II | GAGCTC | 1 cut(s) | 361 |
| Eco130I | CCWWGG | 4 cut(s) | 594, 650, 732, 1937 |
| Eco147I | AGGCCT | 1 cut(s) | 1936 |
| Eco24I | GRGCYC | 1 cut(s) | 363 |
| Eco47I | GGWCC | 3 cut(s) | 430, 591, 1560 |
| Eco47III | AGCGCT | 1 cut(s) | 1141 |
| Eco53kI | GAGCTC | 1 cut(s) | 361 |
| Eco57I | CTGAAG | 2 cut(s) | 56, 300 |
| EcoICRI | GAGCTC | 1 cut(s) | 361 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1923 |
| EcoRII | CCWGG | 4 cut(s) | 85, 146, 1645, 1927 |
| EcoT14I | CCWWGG | 4 cut(s) | 594, 650, 732, 1937 |
| EcoT22I | ATGCAT | 1 cut(s) | 271 |
| EcoT38I | GRGCYC | 1 cut(s) | 363 |
| ErhI | CCWWGG | 4 cut(s) | 594, 650, 732, 1937 |
| FaeI | CATG | 5 cut(s) | 350, 443, 1703, 1713, 1814 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 695, 727 |
| FaqI | GGGAC | 1 cut(s) | 972 |
| FatI | CATG | 5 cut(s) | 346, 439, 1699, 1709, 1810 |
| FauI | CCCGC | 1 cut(s) | 1522 |
| FauNDI | CATATG | 2 cut(s) | 682, 1678 |
| FblI | GTMKAC | 2 cut(s) | 1286, 1485 |
| Fnu4HI | GCNGC | 4 cut(s) | 354, 1408, 1758, 1770 |
| FokI | GGATG | 1 cut(s) | 1836 |
| FriOI | GRGCYC | 1 cut(s) | 363 |
| Fsp4HI | GCNGC | 4 cut(s) | 354, 1408, 1758, 1770 |
| FspBI | CTAG | 4 cut(s) | 161, 1010, 1404, 1938 |
| GlaI | GCGC | 2 cut(s) | 352, 1141 |
| GluI | GCNGC | 4 cut(s) | 354, 1408, 1758, 1770 |
| GsuI | CTGGAG | 2 cut(s) | 1353, 1668 |
| HaeII | RGCGCY | 1 cut(s) | 1143 |
| HaeIII | GGCC | 4 cut(s) | 731, 1752, 1924, 1936 |
| HapII | CCGG | 1 cut(s) | 813 |
| HhaI | GCGC | 2 cut(s) | 353, 1142 |
| Hin1II | CATG | 5 cut(s) | 350, 443, 1703, 1713, 1814 |
| Hin6I | GCGC | 2 cut(s) | 351, 1140 |
| HinP1I | GCGC | 2 cut(s) | 351, 1140 |
| HincII | GTYRAC | 2 cut(s) | 1287, 1687 |
| HindII | GTYRAC | 2 cut(s) | 1287, 1687 |
| HindIII | AAGCTT | 1 cut(s) | 581 |
| HinfI | GANTC | 8 cut(s) | 151, 568, 964, 991, 1028, 1288, 1442, 1883 |
| HpaII | CCGG | 1 cut(s) | 813 |
| HphI | GGTGA | 2 cut(s) | 275, 1954 |
| Hpy166II | GTNNAC | 4 cut(s) | 286, 1287, 1486, 1687 |
| Hpy188III | TCNNGA | 8 cut(s) | 119, 127, 274, 376, 415, 428, 604, 1825 |
| Hpy8I | GTNNAC | 4 cut(s) | 286, 1287, 1486, 1687 |
| Hpy99I | CGWCG | 3 cut(s) | 335, 1288, 1623 |
| HpyAV | CCTTC | 5 cut(s) | 461, 887, 975, 1288, 1591 |
| HpyCH4III | ACNGT | 5 cut(s) | 215, 434, 1304, 1490, 1838 |
| HpyCH4IV | ACGT | 5 cut(s) | 293, 330, 764, 935, 1555 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 449, 716, 737, 1205, 1337, 1477, 1766 |
| HpyF3I | CTNAG | 5 cut(s) | 357, 374, 416, 1290, 1322 |
| HpySE526I | ACGT | 5 cut(s) | 293, 330, 764, 935, 1555 |
| Hsp92II | CATG | 5 cut(s) | 350, 443, 1703, 1713, 1814 |
| HspAI | GCGC | 2 cut(s) | 351, 1140 |
| Kzo9I | GATC | 6 cut(s) | 115, 424, 1117, 1664, 1696, 1725 |
| LguI | GCTCTTC | 2 cut(s) | 823, 1823 |
| LmnI | GCTCC | 1 cut(s) | 366 |
| Lsp1109I | GCAGC | 4 cut(s) | 365, 1394, 1744, 1781 |
| LweI | GCATC | 6 cut(s) | 120, 256, 733, 745, 1030, 1467 |
| MaeI | CTAG | 4 cut(s) | 161, 1010, 1404, 1938 |
| MaeII | ACGT | 5 cut(s) | 293, 330, 764, 935, 1555 |
| MaeIII | GTNAC | 3 cut(s) | 625, 806, 1181 |
| MalI | GATC | 6 cut(s) | 117, 426, 1119, 1666, 1698, 1727 |
| MboI | GATC | 6 cut(s) | 115, 424, 1117, 1664, 1696, 1725 |
| MfeI | CAATTG | 3 cut(s) | 387, 1464, 1729 |
| MhlI | GDGCHC | 1 cut(s) | 363 |
| MlyI | GAGTC | 2 cut(s) | 562, 1282 |
| MmeI | TCCRAC | 4 cut(s) | 439, 810, 1108, 1538 |
| Mph1103I | ATGCAT | 1 cut(s) | 271 |
| MroXI | GAANNNNTTC | 2 cut(s) | 214, 1949 |
| MseI | TTAA | 7 cut(s) | 185, 633, 672, 1269, 1449, 1512, 1716 |
| MspA1I | CMGCKG | 1 cut(s) | 356 |
| MspI | CCGG | 1 cut(s) | 813 |
| MspR9I | CCNGG | 5 cut(s) | 87, 148, 813, 1647, 1929 |
| MunI | CAATTG | 3 cut(s) | 387, 1464, 1729 |
| Mva1269I | GAATGC | 1 cut(s) | 269 |
| MvaI | CCWGG | 4 cut(s) | 87, 148, 1647, 1929 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 449, 716, 737, 1205, 1337, 1477, 1766 |
| NciI | CCSGG | 1 cut(s) | 813 |
| NdeI | CATATG | 2 cut(s) | 682, 1678 |
| NdeII | GATC | 6 cut(s) | 115, 424, 1117, 1664, 1696, 1725 |
| NlaIII | CATG | 5 cut(s) | 350, 443, 1703, 1713, 1814 |
| NlaIV | GGNNCC | 5 cut(s) | 592, 751, 1339, 1388, 1925 |
| NsiI | ATGCAT | 1 cut(s) | 271 |
| PaqCI | CACCTGC | 1 cut(s) | 557 |
| PasI | CCCWGGG | 1 cut(s) | 1928 |
| PceI | AGGCCT | 1 cut(s) | 1936 |
| PciSI | GCTCTTC | 2 cut(s) | 823, 1823 |
| PctI | GAATGC | 1 cut(s) | 269 |
| PdmI | GAANNNNTTC | 2 cut(s) | 214, 1949 |
| PfeI | GAWTC | 6 cut(s) | 151, 964, 991, 1028, 1442, 1883 |
| PfoI | TCCNGGA | 1 cut(s) | 1645 |
| PkrI | GCNGC | 4 cut(s) | 355, 1409, 1759, 1771 |
| PleI | GAGTC | 2 cut(s) | 562, 1282 |
| PpsI | GAGTC | 2 cut(s) | 562, 1282 |
| Psp124BI | GAGCTC | 1 cut(s) | 363 |
| Psp1406I | AACGTT | 2 cut(s) | 935, 1555 |
| Psp6I | CCWGG | 4 cut(s) | 85, 146, 1645, 1927 |
| PspGI | CCWGG | 4 cut(s) | 85, 146, 1645, 1927 |
| PspN4I | GGNNCC | 5 cut(s) | 592, 751, 1339, 1388, 1925 |
| PspPI | GGNCC | 5 cut(s) | 430, 591, 729, 1560, 1923 |
| PstNI | CAGNNNCTG | 4 cut(s) | 133, 967, 1775, 1892 |
| PvuII | CAGCTG | 1 cut(s) | 356 |
| RsaI | GTAC | 2 cut(s) | 37, 1805 |
| RsaNI | GTAC | 2 cut(s) | 36, 1804 |
| SacI | GAGCTC | 1 cut(s) | 363 |
| SalI | GTCGAC | 1 cut(s) | 1285 |
| SapI | GCTCTTC | 2 cut(s) | 823, 1823 |
| SaqAI | TTAA | 7 cut(s) | 185, 633, 672, 1269, 1449, 1512, 1716 |
| SatI | GCNGC | 4 cut(s) | 354, 1408, 1758, 1770 |
| Sau3AI | GATC | 6 cut(s) | 115, 424, 1117, 1664, 1696, 1725 |
| Sau96I | GGNCC | 5 cut(s) | 430, 591, 729, 1560, 1923 |
| ScaI | AGTACT | 1 cut(s) | 1805 |
| SchI | GAGTC | 2 cut(s) | 562, 1282 |
| ScrFI | CCNGG | 5 cut(s) | 87, 148, 813, 1647, 1929 |
| SduI | GDGCHC | 1 cut(s) | 363 |
| SfaNI | GCATC | 6 cut(s) | 120, 256, 733, 745, 1030, 1467 |
| SfcI | CTRYAG | 1 cut(s) | 1486 |
| SinI | GGWCC | 3 cut(s) | 430, 591, 1560 |
| SmlI | CTYRAG | 1 cut(s) | 1089 |
| SmoI | CTYRAG | 1 cut(s) | 1089 |
| SseBI | AGGCCT | 1 cut(s) | 1936 |
| SsiI | CCGC | 3 cut(s) | 1315, 1529, 1948 |
| SspMI | CTAG | 4 cut(s) | 161, 1010, 1404, 1938 |
| SstI | GAGCTC | 1 cut(s) | 363 |
| StuI | AGGCCT | 1 cut(s) | 1936 |
| StyD4I | CCNGG | 5 cut(s) | 85, 146, 811, 1645, 1927 |
| StyI | CCWWGG | 4 cut(s) | 594, 650, 732, 1937 |
| TaaI | ACNGT | 5 cut(s) | 215, 434, 1304, 1490, 1838 |
| TaiI | ACGT | 5 cut(s) | 296, 333, 767, 938, 1558 |
| TaqI | TCGA | 4 cut(s) | 171, 402, 1286, 1663 |
| TatI | WGTACW | 1 cut(s) | 1803 |
| TfiI | GAWTC | 6 cut(s) | 151, 964, 991, 1028, 1442, 1883 |
| Tru1I | TTAA | 7 cut(s) | 185, 633, 672, 1269, 1449, 1512, 1716 |
| Tru9I | TTAA | 7 cut(s) | 185, 633, 672, 1269, 1449, 1512, 1716 |
| TscAI | CASTG | 2 cut(s) | 921, 1633 |
| TseI | GCWGC | 4 cut(s) | 353, 1407, 1757, 1769 |
| TspGWI | ACGGA | 3 cut(s) | 23, 353, 479 |
| TspRI | CASTG | 2 cut(s) | 921, 1633 |
| VpaK11BI | GGWCC | 3 cut(s) | 430, 591, 1560 |
| XmaJI | CCTAGG | 1 cut(s) | 1937 |
| XmiI | GTMKAC | 2 cut(s) | 1286, 1485 |
| XmnI | GAANNNNTTC | 2 cut(s) | 214, 1949 |
| XspI | CTAG | 4 cut(s) | 161, 1010, 1404, 1938 |
| ZrmI | AGTACT | 1 cut(s) | 1805 |
| Zsp2I | ATGCAT | 1 cut(s) | 271 |