MuDR family transposase
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 126 |
| AccI | GTMKAC | 2 cut(s) | 682, 1483 |
| AciI | CCGC | 3 cut(s) | 557, 670, 1471 |
| AclWI | GGATC | 1 cut(s) | 229 |
| AcsI | RAATTY | 3 cut(s) | 527, 616, 902 |
| AcuI | CTGAAG | 1 cut(s) | 931 |
| AfaI | GTAC | 4 cut(s) | 168, 649, 889, 1404 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 1104, 1129 |
| AflIII | ACRYGT | 3 cut(s) | 58, 173, 1054 |
| AjnI | CCWGG | 2 cut(s) | 436, 1477 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 929, 961 |
| AluBI | AGCT | 5 cut(s) | 182, 454, 563, 692, 1307 |
| AluI | AGCT | 5 cut(s) | 182, 454, 563, 692, 1307 |
| Alw21I | GWGCWC | 2 cut(s) | 977, 1294 |
| Alw44I | GTGCAC | 1 cut(s) | 1290 |
| AlwI | GGATC | 1 cut(s) | 229 |
| AoxI | GGCC | 1 cut(s) | 1472 |
| ApaLI | GTGCAC | 1 cut(s) | 1290 |
| ApeKI | GCWGC | 1 cut(s) | 1304 |
| ApoI | RAATTY | 3 cut(s) | 527, 616, 902 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1184, 1216 |
| AspS9I | GGNCC | 4 cut(s) | 367, 933, 1107, 1473 |
| AsuHPI | GGTGA | 5 cut(s) | 386, 806, 977, 1104, 1562 |
| AsuII | TTCGAA | 1 cut(s) | 253 |
| AsuNHI | GCTAGC | 2 cut(s) | 424, 559 |
| AvaII | GGWCC | 3 cut(s) | 367, 933, 1107 |
| BaeGI | GKGCMC | 1 cut(s) | 1294 |
| BbsI | GAAGAC | 2 cut(s) | 1171, 1368 |
| Bbv12I | GWGCWC | 2 cut(s) | 977, 1294 |
| BbvI | GCAGC | 1 cut(s) | 1316 |
| BccI | CCATC | 8 cut(s) | 205, 772, 844, 875, 1060, 1098, 1313, 1400 |
| BciT130I | CCWGG | 2 cut(s) | 438, 1479 |
| BclI | TGATCA | 1 cut(s) | 193 |
| BfaI | CTAG | 5 cut(s) | 132, 183, 425, 510, 560 |
| BfmI | CTRYAG | 1 cut(s) | 532 |
| BfuAI | ACCTGC | 1 cut(s) | 126 |
| BisI | GCNGC | 2 cut(s) | 1305, 1472 |
| BlsI | GCNGC | 2 cut(s) | 1306, 1473 |
| Bme1390I | CCNGG | 2 cut(s) | 438, 1479 |
| Bme18I | GGWCC | 3 cut(s) | 367, 933, 1107 |
| BmgT120I | GGNCC | 4 cut(s) | 367, 933, 1107, 1473 |
| BmiI | GGNNCC | 4 cut(s) | 217, 442, 1283, 1475 |
| BmrFI | CCNGG | 2 cut(s) | 438, 1479 |
| BmsI | GCATC | 4 cut(s) | 213, 239, 1014, 1543 |
| BmtI | GCTAGC | 2 cut(s) | 428, 563 |
| BpiI | GAAGAC | 2 cut(s) | 1171, 1368 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 959, 991 |
| Bpu14I | TTCGAA | 1 cut(s) | 253 |
| Bsa29I | ATCGAT | 2 cut(s) | 233, 279 |
| BsaAI | YACGTR | 1 cut(s) | 1055 |
| BsaJI | CCNNGG | 4 cut(s) | 370, 436, 640, 1477 |
| BsaWI | WCCGGW | 1 cut(s) | 1569 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 425, 455 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 1104, 1129 |
| Bse1I | ACTGG | 2 cut(s) | 935, 1175 |
| BseBI | CCWGG | 2 cut(s) | 438, 1479 |
| BseCI | ATCGAT | 2 cut(s) | 233, 279 |
| BseDI | CCNNGG | 4 cut(s) | 370, 436, 640, 1477 |
| BseGI | GGATG | 5 cut(s) | 836, 886, 1018, 1138, 1426 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 1104, 1129 |
| BseNI | ACTGG | 2 cut(s) | 935, 1175 |
| BseSI | GKGCMC | 1 cut(s) | 1294 |
| BseXI | GCAGC | 1 cut(s) | 1316 |
| BsgI | GTGCAG | 1 cut(s) | 1558 |
| BshFI | GGCC | 1 cut(s) | 1474 |
| BshVI | ATCGAT | 2 cut(s) | 233, 279 |
| BsiHKAI | GWGCWC | 2 cut(s) | 977, 1294 |
| BsiSI | CCGG | 1 cut(s) | 1570 |
| BsiWI | CGTACG | 1 cut(s) | 647 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 1104, 1129 |
| BsmI | GAATGC | 1 cut(s) | 77 |
| BsnI | GGCC | 1 cut(s) | 1474 |
| Bsp119I | TTCGAA | 1 cut(s) | 253 |
| Bsp1286I | GDGCHC | 2 cut(s) | 977, 1294 |
| Bsp1407I | TGTACA | 1 cut(s) | 166 |
| Bsp143I | GATC | 3 cut(s) | 193, 234, 853 |
| Bsp19I | CCATGG | 1 cut(s) | 370 |
| BspACI | CCGC | 3 cut(s) | 557, 670, 1471 |
| BspANI | GGCC | 1 cut(s) | 1474 |
| BspDI | ATCGAT | 2 cut(s) | 233, 279 |
| BspLI | GGNNCC | 4 cut(s) | 217, 442, 1283, 1475 |
| BspMAI | CTGCAG | 1 cut(s) | 536 |
| BspMI | ACCTGC | 1 cut(s) | 126 |
| BspOI | GCTAGC | 2 cut(s) | 428, 563 |
| BspPI | GGATC | 1 cut(s) | 229 |
| BspT104I | TTCGAA | 1 cut(s) | 253 |
| BsrGI | TGTACA | 1 cut(s) | 166 |
| BsrI | ACTGG | 2 cut(s) | 935, 1175 |
| BssECI | CCNNGG | 4 cut(s) | 370, 436, 640, 1477 |
| BssMI | GATC | 3 cut(s) | 193, 234, 853 |
| BssT1I | CCWWGG | 2 cut(s) | 370, 640 |
| Bst2UI | CCWGG | 2 cut(s) | 438, 1479 |
| Bst4CI | ACNGT | 3 cut(s) | 387, 652, 703 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 722 |
| BstAUI | TGTACA | 1 cut(s) | 166 |
| BstBAI | YACGTR | 1 cut(s) | 1055 |
| BstBI | TTCGAA | 1 cut(s) | 253 |
| BstC8I | GCNNGC | 3 cut(s) | 114, 426, 561 |
| BstDSI | CCRYGG | 1 cut(s) | 370 |
| BstEII | GGTNACC | 1 cut(s) | 1325 |
| BstF5I | GGATG | 5 cut(s) | 836, 886, 1018, 1138, 1426 |
| BstKTI | GATC | 3 cut(s) | 196, 237, 856 |
| BstMBI | GATC | 3 cut(s) | 193, 234, 853 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 425, 722, 1304 |
| BstNI | CCWGG | 2 cut(s) | 438, 1479 |
| BstNSI | RCATGY | 5 cut(s) | 116, 177, 725, 736, 1298 |
| BstPI | GGTNACC | 1 cut(s) | 1325 |
| BstSCI | CCNGG | 2 cut(s) | 436, 1477 |
| BstSFI | CTRYAG | 1 cut(s) | 532 |
| BstSLI | GKGCMC | 1 cut(s) | 1294 |
| BstV1I | GCAGC | 1 cut(s) | 1316 |
| BstV2I | GAAGAC | 2 cut(s) | 1171, 1368 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 226 |
| Bsu15I | ATCGAT | 2 cut(s) | 233, 279 |
| BsuRI | GGCC | 1 cut(s) | 1474 |
| BsuTUI | ATCGAT | 2 cut(s) | 233, 279 |
| BtgI | CCRYGG | 1 cut(s) | 370 |
| BtsCI | GGATG | 5 cut(s) | 836, 886, 1018, 1138, 1426 |
| BtsI | GCAGTG | 1 cut(s) | 426 |
| BtsIMutI | CAGTG | 2 cut(s) | 426, 1168 |
| BveI | ACCTGC | 1 cut(s) | 126 |
| Cac8I | GCNNGC | 3 cut(s) | 114, 426, 561 |
| Cfr13I | GGNCC | 4 cut(s) | 367, 933, 1107, 1473 |
| ClaI | ATCGAT | 2 cut(s) | 233, 279 |
| Csp6I | GTAC | 4 cut(s) | 167, 648, 888, 1403 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 865, 900 |
| CviJI | RGCY | 8 cut(s) | 182, 441, 454, 563, 692, 1097, 1307, 1474 |
| CviKI_1 | RGCY | 8 cut(s) | 182, 441, 454, 563, 692, 1097, 1307, 1474 |
| CviQI | GTAC | 4 cut(s) | 167, 648, 888, 1403 |
| DpnI | GATC | 3 cut(s) | 195, 236, 855 |
| DpnII | GATC | 3 cut(s) | 193, 234, 853 |
| Eco130I | CCWWGG | 2 cut(s) | 370, 640 |
| Eco47I | GGWCC | 3 cut(s) | 367, 933, 1107 |
| Eco57I | CTGAAG | 1 cut(s) | 931 |
| Eco91I | GGTNACC | 1 cut(s) | 1325 |
| EcoO65I | GGTNACC | 1 cut(s) | 1325 |
| EcoRII | CCWGG | 2 cut(s) | 436, 1477 |
| EcoT14I | CCWWGG | 2 cut(s) | 370, 640 |
| EcoT22I | ATGCAT | 2 cut(s) | 727, 943 |
| ErhI | CCWWGG | 2 cut(s) | 370, 640 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1234, 1266 |
| FauI | CCCGC | 1 cut(s) | 564 |
| FauNDI | CATATG | 1 cut(s) | 1333 |
| FbaI | TGATCA | 1 cut(s) | 193 |
| FblI | GTMKAC | 2 cut(s) | 682, 1483 |
| Fnu4HI | GCNGC | 2 cut(s) | 1305, 1472 |
| FokI | GGATG | 5 cut(s) | 823, 893, 1025, 1145, 1433 |
| Fsp4HI | GCNGC | 2 cut(s) | 1305, 1472 |
| FspBI | CTAG | 5 cut(s) | 132, 183, 425, 510, 560 |
| GluI | GCNGC | 2 cut(s) | 1305, 1472 |
| HaeIII | GGCC | 1 cut(s) | 1474 |
| HapII | CCGG | 1 cut(s) | 1570 |
| HincII | GTYRAC | 1 cut(s) | 244 |
| HindII | GTYRAC | 1 cut(s) | 244 |
| HinfI | GANTC | 5 cut(s) | 124, 250, 578, 989, 1435 |
| HpaII | CCGG | 1 cut(s) | 1570 |
| HphI | GGTGA | 5 cut(s) | 386, 806, 977, 1104, 1562 |
| Hpy166II | GTNNAC | 7 cut(s) | 56, 244, 577, 683, 1234, 1292, 1484 |
| Hpy188I | TCNGA | 6 cut(s) | 159, 583, 667, 900, 1081, 1211 |
| Hpy188III | TCNNGA | 7 cut(s) | 191, 208, 298, 611, 710, 857, 1439 |
| Hpy8I | GTNNAC | 7 cut(s) | 56, 244, 577, 683, 1234, 1292, 1484 |
| HpyAV | CCTTC | 3 cut(s) | 358, 512, 1003 |
| HpyCH4III | ACNGT | 3 cut(s) | 387, 652, 703 |
| HpyCH4IV | ACGT | 4 cut(s) | 58, 656, 1054, 1090 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 425, 722, 1304 |
| HpySE526I | ACGT | 4 cut(s) | 58, 656, 1054, 1090 |
| Ksp22I | TGATCA | 1 cut(s) | 193 |
| Kzo9I | GATC | 3 cut(s) | 193, 234, 853 |
| LmnI | GCTCC | 2 cut(s) | 446, 838 |
| Lsp1109I | GCAGC | 1 cut(s) | 1316 |
| LweI | GCATC | 4 cut(s) | 213, 239, 1014, 1543 |
| MaeI | CTAG | 5 cut(s) | 132, 183, 425, 510, 560 |
| MaeII | ACGT | 4 cut(s) | 58, 656, 1054, 1090 |
| MaeIII | GTNAC | 5 cut(s) | 61, 652, 827, 1190, 1325 |
| MalI | GATC | 3 cut(s) | 195, 236, 855 |
| MboI | GATC | 3 cut(s) | 193, 234, 853 |
| MboII | GAAGA | 5 cut(s) | 787, 1176, 1358, 1368, 1529 |
| MfeI | CAATTG | 2 cut(s) | 264, 595 |
| MhlI | GDGCHC | 2 cut(s) | 977, 1294 |
| MlyI | GAGTC | 2 cut(s) | 572, 1444 |
| MmeI | TCCRAC | 1 cut(s) | 1141 |
| MnlI | CCTC | 4 cut(s) | 85, 671, 1120, 1316 |
| Mph1103I | ATGCAT | 2 cut(s) | 727, 943 |
| MseI | TTAA | 3 cut(s) | 150, 1275, 1494 |
| MslI | CAYNNNNRTG | 5 cut(s) | 209, 375, 1055, 1117, 1173 |
| MspI | CCGG | 1 cut(s) | 1570 |
| MspR9I | CCNGG | 2 cut(s) | 438, 1479 |
| MunI | CAATTG | 2 cut(s) | 264, 595 |
| Mva1269I | GAATGC | 1 cut(s) | 77 |
| MvaI | CCWGG | 2 cut(s) | 438, 1479 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 425, 722, 1304 |
| NcoI | CCATGG | 1 cut(s) | 370 |
| NdeI | CATATG | 1 cut(s) | 1333 |
| NdeII | GATC | 3 cut(s) | 193, 234, 853 |
| NheI | GCTAGC | 2 cut(s) | 424, 559 |
| NlaIV | GGNNCC | 4 cut(s) | 217, 442, 1283, 1475 |
| NmuCI | GTSAC | 1 cut(s) | 1190 |
| NsiI | ATGCAT | 2 cut(s) | 727, 943 |
| NspI | RCATGY | 5 cut(s) | 116, 177, 725, 736, 1298 |
| NspV | TTCGAA | 1 cut(s) | 253 |
| PaeI | GCATGC | 1 cut(s) | 116 |
| PciI | ACATGT | 1 cut(s) | 173 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 484 |
| PctI | GAATGC | 1 cut(s) | 77 |
| PfeI | GAWTC | 3 cut(s) | 124, 250, 989 |
| Pfl23II | CGTACG | 1 cut(s) | 647 |
| PkrI | GCNGC | 2 cut(s) | 1306, 1473 |
| PleI | GAGTC | 2 cut(s) | 572, 1443 |
| PpsI | GAGTC | 2 cut(s) | 572, 1443 |
| Ppu21I | YACGTR | 1 cut(s) | 1055 |
| PscI | ACATGT | 1 cut(s) | 173 |
| Psp6I | CCWGG | 2 cut(s) | 436, 1477 |
| PspEI | GGTNACC | 1 cut(s) | 1325 |
| PspGI | CCWGG | 2 cut(s) | 436, 1477 |
| PspLI | CGTACG | 1 cut(s) | 647 |
| PspN4I | GGNNCC | 4 cut(s) | 217, 442, 1283, 1475 |
| PspPI | GGNCC | 4 cut(s) | 367, 933, 1107, 1473 |
| PstI | CTGCAG | 1 cut(s) | 536 |
| RsaI | GTAC | 4 cut(s) | 168, 649, 889, 1404 |
| RsaNI | GTAC | 4 cut(s) | 167, 648, 888, 1403 |
| RseI | CAYNNNNRTG | 5 cut(s) | 209, 375, 1055, 1117, 1173 |
| SaqAI | TTAA | 3 cut(s) | 150, 1275, 1494 |
| SatI | GCNGC | 2 cut(s) | 1305, 1472 |
| Sau3AI | GATC | 3 cut(s) | 193, 234, 853 |
| Sau96I | GGNCC | 4 cut(s) | 367, 933, 1107, 1473 |
| SchI | GAGTC | 2 cut(s) | 572, 1444 |
| ScrFI | CCNGG | 2 cut(s) | 438, 1479 |
| SduI | GDGCHC | 2 cut(s) | 977, 1294 |
| SfaNI | GCATC | 4 cut(s) | 213, 239, 1014, 1543 |
| SfcI | CTRYAG | 1 cut(s) | 532 |
| SfuI | TTCGAA | 1 cut(s) | 253 |
| SinI | GGWCC | 3 cut(s) | 367, 933, 1107 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 209, 375, 1055, 1117, 1173 |
| SphI | GCATGC | 1 cut(s) | 116 |
| SsiI | CCGC | 3 cut(s) | 557, 670, 1471 |
| SspI | AATATT | 1 cut(s) | 982 |
| SspMI | CTAG | 5 cut(s) | 132, 183, 425, 510, 560 |
| StyD4I | CCNGG | 2 cut(s) | 436, 1477 |
| StyI | CCWWGG | 2 cut(s) | 370, 640 |
| TaaI | ACNGT | 3 cut(s) | 387, 652, 703 |
| TaiI | ACGT | 4 cut(s) | 61, 659, 1057, 1093 |
| TaqI | TCGA | 6 cut(s) | 233, 253, 279, 483, 852, 1344 |
| TatI | WGTACW | 1 cut(s) | 166 |
| TauI | GCSGC | 1 cut(s) | 1474 |
| TfiI | GAWTC | 3 cut(s) | 124, 250, 989 |
| Tru1I | TTAA | 3 cut(s) | 150, 1275, 1494 |
| Tru9I | TTAA | 3 cut(s) | 150, 1275, 1494 |
| TscAI | CASTG | 2 cut(s) | 426, 1175 |
| TseFI | GTSAC | 1 cut(s) | 1190 |
| TseI | GCWGC | 1 cut(s) | 1304 |
| Tsp45I | GTSAC | 1 cut(s) | 1190 |
| TspRI | CASTG | 2 cut(s) | 426, 1175 |
| VneI | GTGCAC | 1 cut(s) | 1290 |
| VpaK11BI | GGWCC | 3 cut(s) | 367, 933, 1107 |
| XapI | RAATTY | 3 cut(s) | 527, 616, 902 |
| XceI | RCATGY | 5 cut(s) | 116, 177, 725, 736, 1298 |
| XmiI | GTMKAC | 2 cut(s) | 682, 1483 |
| XspI | CTAG | 5 cut(s) | 132, 183, 425, 510, 560 |
| Zsp2I | ATGCAT | 2 cut(s) | 727, 943 |