isoform X1
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| SWIM | PF04434 | 440 - 470 | 2.7e-07 | SWIM zinc finger |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 2 cut(s) | 362, 1026 |
| AccI | GTMKAC | 1 cut(s) | 50 |
| AccII | CGCG | 1 cut(s) | 935 |
| AciI | CCGC | 1 cut(s) | 933 |
| AclWI | GGATC | 3 cut(s) | 1054, 1236, 1433 |
| AcoI | YGGCCR | 1 cut(s) | 840 |
| AcsI | RAATTY | 4 cut(s) | 213, 371, 447, 512 |
| AcuI | CTGAAG | 2 cut(s) | 1022, 1125 |
| AfaI | GTAC | 4 cut(s) | 425, 555, 798, 1545 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 1127 |
| AjnI | CCWGG | 4 cut(s) | 85, 802, 1042, 1094 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 390, 422 |
| AleI | CACNNNNGTG | 1 cut(s) | 419 |
| AluBI | AGCT | 7 cut(s) | 70, 237, 385, 642, 961, 1190, 1409 |
| AluI | AGCT | 7 cut(s) | 70, 237, 385, 642, 961, 1190, 1409 |
| AlwI | GGATC | 3 cut(s) | 1054, 1236, 1433 |
| AoxI | GGCC | 1 cut(s) | 840 |
| ApeKI | GCWGC | 5 cut(s) | 237, 385, 462, 1397, 1409 |
| ApoI | RAATTY | 4 cut(s) | 213, 371, 447, 512 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 39, 1374 |
| AspLEI | GCGC | 1 cut(s) | 937 |
| AspS9I | GGNCC | 1 cut(s) | 1200 |
| AsuHPI | GGTGA | 3 cut(s) | 406, 986, 1184 |
| AsuII | TTCGAA | 1 cut(s) | 510 |
| AvaII | GGWCC | 1 cut(s) | 1200 |
| BanI | GGYRCC | 2 cut(s) | 362, 1026 |
| BbvI | GCAGC | 5 cut(s) | 224, 372, 474, 1384, 1396 |
| BccI | CCATC | 2 cut(s) | 515, 1162 |
| BceAI | ACGGC | 1 cut(s) | 1014 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 335, 369 |
| BciT130I | CCWGG | 4 cut(s) | 87, 804, 1044, 1096 |
| BclI | TGATCA | 1 cut(s) | 1138 |
| BfaI | CTAG | 1 cut(s) | 1146 |
| BisI | GCNGC | 5 cut(s) | 238, 386, 463, 1398, 1410 |
| BlsI | GCNGC | 5 cut(s) | 239, 387, 464, 1399, 1411 |
| Bme1390I | CCNGG | 4 cut(s) | 87, 804, 1044, 1096 |
| Bme18I | GGWCC | 1 cut(s) | 1200 |
| BmgT120I | GGNCC | 1 cut(s) | 1200 |
| BmiI | GGNNCC | 2 cut(s) | 364, 1028 |
| BmrFI | CCNGG | 4 cut(s) | 87, 804, 1044, 1096 |
| BmsI | GCATC | 4 cut(s) | 672, 932, 967, 1107 |
| Bpu14I | TTCGAA | 1 cut(s) | 510 |
| BsaJI | CCNNGG | 4 cut(s) | 662, 733, 1042, 1330 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 1127 |
| Bse118I | RCCGGY | 1 cut(s) | 1120 |
| BseBI | CCWGG | 4 cut(s) | 87, 804, 1044, 1096 |
| BseDI | CCNNGG | 4 cut(s) | 662, 733, 1042, 1330 |
| BseGI | GGATG | 6 cut(s) | 259, 530, 808, 1189, 1255, 1426 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 1127 |
| BseMII | CTCAG | 2 cut(s) | 264, 279 |
| BseRI | GAGGAG | 2 cut(s) | 1192, 1541 |
| BseXI | GCAGC | 5 cut(s) | 224, 372, 474, 1384, 1396 |
| Bsh1236I | CGCG | 1 cut(s) | 935 |
| BshFI | GGCC | 1 cut(s) | 842 |
| BshNI | GGYRCC | 2 cut(s) | 362, 1026 |
| BsiSI | CCGG | 1 cut(s) | 1121 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 1127 |
| BsmI | GAATGC | 1 cut(s) | 624 |
| BsnI | GGCC | 1 cut(s) | 842 |
| Bsp119I | TTCGAA | 1 cut(s) | 510 |
| Bsp1407I | TGTACA | 2 cut(s) | 423, 1543 |
| Bsp143I | GATC | 5 cut(s) | 760, 1046, 1138, 1228, 1438 |
| BspACI | CCGC | 1 cut(s) | 933 |
| BspANI | GGCC | 1 cut(s) | 842 |
| BspCNI | CTCAG | 2 cut(s) | 265, 280 |
| BspFNI | CGCG | 1 cut(s) | 935 |
| BspLI | GGNNCC | 2 cut(s) | 364, 1028 |
| BspPI | GGATC | 3 cut(s) | 1054, 1236, 1433 |
| BspQI | GCTCTTC | 1 cut(s) | 1101 |
| BspT104I | TTCGAA | 1 cut(s) | 510 |
| BspT107I | GGYRCC | 2 cut(s) | 362, 1026 |
| BsrFI | RCCGGY | 1 cut(s) | 1120 |
| BsrGI | TGTACA | 2 cut(s) | 423, 1543 |
| BssAI | RCCGGY | 1 cut(s) | 1120 |
| BssECI | CCNNGG | 4 cut(s) | 662, 733, 1042, 1330 |
| BssMI | GATC | 5 cut(s) | 760, 1046, 1138, 1228, 1438 |
| BssT1I | CCWWGG | 3 cut(s) | 662, 733, 1330 |
| Bst2UI | CCWGG | 4 cut(s) | 87, 804, 1044, 1096 |
| Bst4CI | ACNGT | 4 cut(s) | 698, 880, 944, 1263 |
| Bst6I | CTCTTC | 1 cut(s) | 1101 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1470 |
| BstAUI | TGTACA | 2 cut(s) | 423, 1543 |
| BstBI | TTCGAA | 1 cut(s) | 510 |
| BstC8I | GCNNGC | 1 cut(s) | 1122 |
| BstDEI | CTNAG | 4 cut(s) | 147, 273, 288, 962 |
| BstF5I | GGATG | 6 cut(s) | 259, 530, 808, 1189, 1255, 1426 |
| BstFNI | CGCG | 1 cut(s) | 935 |
| BstHHI | GCGC | 1 cut(s) | 937 |
| BstKTI | GATC | 5 cut(s) | 763, 1049, 1141, 1231, 1441 |
| BstMBI | GATC | 5 cut(s) | 760, 1046, 1138, 1228, 1438 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 576, 1100, 1117, 1397, 1406, 1470, 1511 |
| BstNI | CCWGG | 4 cut(s) | 87, 804, 1044, 1096 |
| BstNSI | RCATGY | 3 cut(s) | 497, 593, 832 |
| BstSCI | CCNGG | 4 cut(s) | 85, 802, 1042, 1094 |
| BstUI | CGCG | 1 cut(s) | 935 |
| BstV1I | GCAGC | 5 cut(s) | 224, 372, 474, 1384, 1396 |
| BstX2I | RGATCY | 1 cut(s) | 1438 |
| BstYI | RGATCY | 1 cut(s) | 1438 |
| BsuRI | GGCC | 1 cut(s) | 842 |
| BtsCI | GGATG | 6 cut(s) | 259, 530, 808, 1189, 1255, 1426 |
| Cac8I | GCNNGC | 1 cut(s) | 1122 |
| CfoI | GCGC | 1 cut(s) | 937 |
| Cfr10I | RCCGGY | 1 cut(s) | 1120 |
| Cfr13I | GGNCC | 1 cut(s) | 1200 |
| Csp6I | GTAC | 4 cut(s) | 424, 554, 797, 1544 |
| CviAII | CATG | 9 cut(s) | 225, 452, 494, 590, 829, 1075, 1319, 1388, 1555 |
| CviQI | GTAC | 4 cut(s) | 424, 554, 797, 1544 |
| DdeI | CTNAG | 4 cut(s) | 147, 273, 288, 962 |
| DpnI | GATC | 5 cut(s) | 762, 1048, 1140, 1230, 1440 |
| DpnII | GATC | 5 cut(s) | 760, 1046, 1138, 1228, 1438 |
| EaeI | YGGCCR | 1 cut(s) | 840 |
| Eam1104I | CTCTTC | 1 cut(s) | 1101 |
| EarI | CTCTTC | 1 cut(s) | 1101 |
| Eco130I | CCWWGG | 3 cut(s) | 662, 733, 1330 |
| Eco32I | GATATC | 2 cut(s) | 670, 708 |
| Eco47I | GGWCC | 1 cut(s) | 1200 |
| Eco57I | CTGAAG | 2 cut(s) | 1022, 1125 |
| EcoRI | GAATTC | 1 cut(s) | 447 |
| EcoRII | CCWGG | 4 cut(s) | 85, 802, 1042, 1094 |
| EcoRV | GATATC | 2 cut(s) | 670, 708 |
| EcoT14I | CCWWGG | 3 cut(s) | 662, 733, 1330 |
| EcoT22I | ATGCAT | 3 cut(s) | 834, 925, 1432 |
| ErhI | CCWWGG | 3 cut(s) | 662, 733, 1330 |
| FaeI | CATG | 9 cut(s) | 228, 455, 497, 593, 832, 1078, 1322, 1391, 1558 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 290, 322, 558, 590 |
| FatI | CATG | 9 cut(s) | 224, 451, 493, 589, 828, 1074, 1318, 1387, 1554 |
| FauI | CCCGC | 1 cut(s) | 940 |
| FauNDI | CATATG | 2 cut(s) | 919, 1126 |
| FbaI | TGATCA | 1 cut(s) | 1138 |
| FblI | GTMKAC | 1 cut(s) | 50 |
| Fnu4HI | GCNGC | 5 cut(s) | 238, 386, 463, 1398, 1410 |
| FokI | GGATG | 6 cut(s) | 266, 537, 795, 1196, 1262, 1433 |
| Fsp4HI | GCNGC | 5 cut(s) | 238, 386, 463, 1398, 1410 |
| FspBI | CTAG | 1 cut(s) | 1146 |
| GlaI | GCGC | 1 cut(s) | 936 |
| GluI | GCNGC | 5 cut(s) | 238, 386, 463, 1398, 1410 |
| HaeIII | GGCC | 1 cut(s) | 842 |
| HapII | CCGG | 1 cut(s) | 1121 |
| HhaI | GCGC | 1 cut(s) | 937 |
| Hin1II | CATG | 9 cut(s) | 228, 455, 497, 593, 832, 1078, 1322, 1391, 1558 |
| Hin6I | GCGC | 1 cut(s) | 935 |
| HinP1I | GCGC | 1 cut(s) | 935 |
| HincII | GTYRAC | 1 cut(s) | 1327 |
| HindII | GTYRAC | 1 cut(s) | 1327 |
| HindIII | AAGCTT | 1 cut(s) | 959 |
| HinfI | GANTC | 5 cut(s) | 539, 728, 1082, 1162, 1523 |
| HpaII | CCGG | 1 cut(s) | 1121 |
| HphI | GGTGA | 3 cut(s) | 406, 986, 1184 |
| Hpy166II | GTNNAC | 6 cut(s) | 51, 424, 426, 556, 1276, 1327 |
| Hpy188I | TCNGA | 5 cut(s) | 289, 370, 1002, 1143, 1167 |
| Hpy188III | TCNNGA | 7 cut(s) | 312, 377, 616, 629, 673, 1016, 1198 |
| Hpy8I | GTNNAC | 6 cut(s) | 51, 424, 426, 556, 1276, 1327 |
| HpyAV | CCTTC | 3 cut(s) | 191, 335, 997 |
| HpyCH4III | ACNGT | 4 cut(s) | 698, 880, 944, 1263 |
| HpyCH4IV | ACGT | 3 cut(s) | 552, 1051, 1243 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 576, 1100, 1117, 1397, 1406, 1470, 1511 |
| HpyF3I | CTNAG | 4 cut(s) | 147, 273, 288, 962 |
| HpySE526I | ACGT | 3 cut(s) | 552, 1051, 1243 |
| Hsp92II | CATG | 9 cut(s) | 228, 455, 497, 593, 832, 1078, 1322, 1391, 1558 |
| HspAI | GCGC | 1 cut(s) | 935 |
| KroI | GCCGGC | 1 cut(s) | 1120 |
| KroNI | GCCGGC | 1 cut(s) | 1122 |
| Ksp22I | TGATCA | 1 cut(s) | 1138 |
| Kzo9I | GATC | 5 cut(s) | 760, 1046, 1138, 1228, 1438 |
| LguI | GCTCTTC | 1 cut(s) | 1101 |
| Lsp1109I | GCAGC | 5 cut(s) | 224, 372, 474, 1384, 1396 |
| LweI | GCATC | 4 cut(s) | 672, 932, 967, 1107 |
| MaeI | CTAG | 1 cut(s) | 1146 |
| MaeII | ACGT | 3 cut(s) | 552, 1051, 1243 |
| MaeIII | GTNAC | 2 cut(s) | 745, 824 |
| MalI | GATC | 5 cut(s) | 762, 1048, 1140, 1230, 1440 |
| MboI | GATC | 5 cut(s) | 760, 1046, 1138, 1228, 1438 |
| MboII | GAAGA | 5 cut(s) | 199, 242, 566, 918, 1118 |
| MflI | RGATCY | 1 cut(s) | 1438 |
| Mph1103I | ATGCAT | 3 cut(s) | 834, 925, 1432 |
| MroNI | GCCGGC | 1 cut(s) | 1120 |
| MroXI | GAANNNNTTC | 2 cut(s) | 39, 1374 |
| MseI | TTAA | 3 cut(s) | 953, 1089, 1266 |
| MslI | CAYNNNNRTG | 1 cut(s) | 419 |
| MspI | CCGG | 1 cut(s) | 1121 |
| MspR9I | CCNGG | 4 cut(s) | 87, 804, 1044, 1096 |
| Mva1269I | GAATGC | 1 cut(s) | 624 |
| MvaI | CCWGG | 4 cut(s) | 87, 804, 1044, 1096 |
| MvnI | CGCG | 1 cut(s) | 935 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 576, 1100, 1117, 1397, 1406, 1470, 1511 |
| NaeI | GCCGGC | 1 cut(s) | 1122 |
| NdeI | CATATG | 2 cut(s) | 919, 1126 |
| NdeII | GATC | 5 cut(s) | 760, 1046, 1138, 1228, 1438 |
| NgoMIV | GCCGGC | 1 cut(s) | 1120 |
| NlaIII | CATG | 9 cut(s) | 228, 455, 497, 593, 832, 1078, 1322, 1391, 1558 |
| NlaIV | GGNNCC | 2 cut(s) | 364, 1028 |
| NsiI | ATGCAT | 3 cut(s) | 834, 925, 1432 |
| NspI | RCATGY | 3 cut(s) | 497, 593, 832 |
| NspV | TTCGAA | 1 cut(s) | 510 |
| OliI | CACNNNNGTG | 1 cut(s) | 419 |
| PciSI | GCTCTTC | 1 cut(s) | 1101 |
| PctI | GAATGC | 1 cut(s) | 624 |
| PdiI | GCCGGC | 1 cut(s) | 1122 |
| PdmI | GAANNNNTTC | 2 cut(s) | 39, 1374 |
| PfeI | GAWTC | 5 cut(s) | 539, 728, 1082, 1162, 1523 |
| PkrI | GCNGC | 5 cut(s) | 239, 387, 464, 1399, 1411 |
| Psp6I | CCWGG | 4 cut(s) | 85, 802, 1042, 1094 |
| PspGI | CCWGG | 4 cut(s) | 85, 802, 1042, 1094 |
| PspN4I | GGNNCC | 2 cut(s) | 364, 1028 |
| PspPI | GGNCC | 1 cut(s) | 1200 |
| PsuI | RGATCY | 1 cut(s) | 1438 |
| RsaI | GTAC | 4 cut(s) | 425, 555, 798, 1545 |
| RsaNI | GTAC | 4 cut(s) | 424, 554, 797, 1544 |
| RseI | CAYNNNNRTG | 1 cut(s) | 419 |
| SapI | GCTCTTC | 1 cut(s) | 1101 |
| SaqAI | TTAA | 3 cut(s) | 953, 1089, 1266 |
| SatI | GCNGC | 5 cut(s) | 238, 386, 463, 1398, 1410 |
| Sau3AI | GATC | 5 cut(s) | 760, 1046, 1138, 1228, 1438 |
| Sau96I | GGNCC | 1 cut(s) | 1200 |
| ScrFI | CCNGG | 4 cut(s) | 87, 804, 1044, 1096 |
| SfaNI | GCATC | 4 cut(s) | 672, 932, 967, 1107 |
| SfuI | TTCGAA | 1 cut(s) | 510 |
| SinI | GGWCC | 1 cut(s) | 1200 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 419 |
| SsiI | CCGC | 1 cut(s) | 933 |
| SspMI | CTAG | 1 cut(s) | 1146 |
| StyD4I | CCNGG | 4 cut(s) | 85, 802, 1042, 1094 |
| StyI | CCWWGG | 3 cut(s) | 662, 733, 1330 |
| TaaI | ACNGT | 4 cut(s) | 698, 880, 944, 1263 |
| TaiI | ACGT | 3 cut(s) | 555, 1054, 1246 |
| TaqI | TCGA | 7 cut(s) | 43, 296, 376, 510, 595, 1280, 1303 |
| TatI | WGTACW | 2 cut(s) | 423, 1543 |
| TfiI | GAWTC | 5 cut(s) | 539, 728, 1082, 1162, 1523 |
| Tru1I | TTAA | 3 cut(s) | 953, 1089, 1266 |
| Tru9I | TTAA | 3 cut(s) | 953, 1089, 1266 |
| TseI | GCWGC | 5 cut(s) | 237, 385, 462, 1397, 1409 |
| TspDTI | ATGAA | 9 cut(s) | 17, 213, 270, 411, 440, 866, 911, 1175, 1200 |
| TspGWI | ACGGA | 1 cut(s) | 1431 |
| VpaK11BI | GGWCC | 1 cut(s) | 1200 |
| XapI | RAATTY | 4 cut(s) | 213, 371, 447, 512 |
| XceI | RCATGY | 3 cut(s) | 497, 593, 832 |
| XmiI | GTMKAC | 1 cut(s) | 50 |
| XmnI | GAANNNNTTC | 2 cut(s) | 39, 1374 |
| XspI | CTAG | 1 cut(s) | 1146 |
| Zsp2I | ATGCAT | 3 cut(s) | 834, 925, 1432 |