isoform X1
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 482 |
| AccI | GTMKAC | 1 cut(s) | 911 |
| AclWI | GGATC | 2 cut(s) | 559, 794 |
| AcsI | RAATTY | 2 cut(s) | 419, 863 |
| AcuI | CTGAAG | 1 cut(s) | 378 |
| AfaI | GTAC | 2 cut(s) | 662, 960 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 343, 470 |
| AgsI | TTSAA | 9 cut(s) | 92, 256, 299, 365, 404, 578, 607, 634, 863 |
| AjnI | CCWGG | 1 cut(s) | 154 |
| Alw21I | GWGCWC | 1 cut(s) | 29 |
| Alw26I | GTCTC | 1 cut(s) | 758 |
| Alw44I | GTGCAC | 1 cut(s) | 25 |
| AlwI | GGATC | 2 cut(s) | 559, 794 |
| Ama87I | CYCGRG | 1 cut(s) | 772 |
| ApaLI | GTGCAC | 1 cut(s) | 25 |
| ApeKI | GCWGC | 4 cut(s) | 273, 306, 719, 846 |
| ApoI | RAATTY | 2 cut(s) | 419, 863 |
| AseI | ATTAAT | 1 cut(s) | 60 |
| AsuHPI | GGTGA | 2 cut(s) | 251, 500 |
| AvaI | CYCGRG | 1 cut(s) | 772 |
| BaeGI | GKGCMC | 1 cut(s) | 29 |
| BbsI | GAAGAC | 1 cut(s) | 863 |
| Bbv12I | GWGCWC | 1 cut(s) | 29 |
| BbvI | GCAGC | 4 cut(s) | 285, 293, 706, 833 |
| BccI | CCATC | 3 cut(s) | 122, 811, 884 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 404, 438 |
| BciT130I | CCWGG | 1 cut(s) | 156 |
| BcoDI | GTCTC | 1 cut(s) | 758 |
| BfaI | CTAG | 3 cut(s) | 393, 693, 833 |
| BglII | AGATCT | 1 cut(s) | 776 |
| BisI | GCNGC | 4 cut(s) | 274, 307, 720, 847 |
| BlsI | GCNGC | 4 cut(s) | 275, 308, 721, 848 |
| Bme1390I | CCNGG | 1 cut(s) | 156 |
| BmeT110I | CYCGRG | 1 cut(s) | 772 |
| BmrFI | CCNGG | 1 cut(s) | 156 |
| BmsI | GCATC | 1 cut(s) | 464 |
| BpiI | GAAGAC | 1 cut(s) | 863 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 64, 96 |
| BsaJI | CCNNGG | 1 cut(s) | 448 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 343, 470 |
| Bse1I | ACTGG | 1 cut(s) | 942 |
| Bse3DI | GCAATG | 1 cut(s) | 187 |
| BseBI | CCWGG | 1 cut(s) | 156 |
| BseDI | CCNNGG | 1 cut(s) | 448 |
| BseGI | GGATG | 5 cut(s) | 10, 22, 164, 328, 479 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 343, 470 |
| BseMI | GCAATG | 1 cut(s) | 187 |
| BseMII | CTCAG | 2 cut(s) | 333, 705 |
| BseNI | ACTGG | 1 cut(s) | 942 |
| BseSI | GKGCMC | 1 cut(s) | 29 |
| BseXI | GCAGC | 4 cut(s) | 285, 293, 706, 833 |
| BsiHKAI | GWGCWC | 1 cut(s) | 29 |
| BsiHKCI | CYCGRG | 1 cut(s) | 772 |
| BslFI | GGGAC | 1 cut(s) | 907 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 343, 470 |
| BsmAI | GTCTC | 1 cut(s) | 758 |
| BsmFI | GGGAC | 1 cut(s) | 907 |
| BsmI | GAATGC | 1 cut(s) | 448 |
| BsoBI | CYCGRG | 1 cut(s) | 772 |
| Bsp1286I | GDGCHC | 1 cut(s) | 29 |
| Bsp143I | GATC | 3 cut(s) | 551, 776, 799 |
| BspCNI | CTCAG | 2 cut(s) | 334, 706 |
| BspPI | GGATC | 2 cut(s) | 559, 794 |
| BsrDI | GCAATG | 1 cut(s) | 187 |
| BsrI | ACTGG | 1 cut(s) | 942 |
| BssECI | CCNNGG | 1 cut(s) | 448 |
| BssMI | GATC | 3 cut(s) | 551, 776, 799 |
| Bst2UI | CCWGG | 1 cut(s) | 156 |
| Bst4CI | ACNGT | 3 cut(s) | 108, 250, 263 |
| Bst6I | CTCTTC | 2 cut(s) | 156, 573 |
| BstC8I | GCNNGC | 1 cut(s) | 844 |
| BstDEI | CTNAG | 3 cut(s) | 342, 611, 714 |
| BstDSI | CCRYGG | 1 cut(s) | 448 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 341 |
| BstF5I | GGATG | 5 cut(s) | 10, 22, 164, 328, 479 |
| BstKTI | GATC | 3 cut(s) | 554, 779, 802 |
| BstMAI | GTCTC | 1 cut(s) | 758 |
| BstMBI | GATC | 3 cut(s) | 551, 776, 799 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 677, 855 |
| BstNI | CCWGG | 1 cut(s) | 156 |
| BstSCI | CCNGG | 1 cut(s) | 154 |
| BstSLI | GKGCMC | 1 cut(s) | 29 |
| BstV1I | GCAGC | 4 cut(s) | 285, 293, 706, 833 |
| BstV2I | GAAGAC | 1 cut(s) | 863 |
| BstX2I | RGATCY | 1 cut(s) | 776 |
| BstYI | RGATCY | 1 cut(s) | 776 |
| BtgI | CCRYGG | 1 cut(s) | 448 |
| BtsCI | GGATG | 5 cut(s) | 10, 22, 164, 328, 479 |
| BtsI | GCAGTG | 1 cut(s) | 217 |
| BtsIMutI | CAGTG | 3 cut(s) | 217, 268, 339 |
| Cac8I | GCNNGC | 1 cut(s) | 844 |
| Csp6I | GTAC | 2 cut(s) | 661, 959 |
| CviAII | CATG | 3 cut(s) | 49, 539, 955 |
| CviQI | GTAC | 2 cut(s) | 661, 959 |
| DdeI | CTNAG | 3 cut(s) | 342, 611, 714 |
| DpnI | GATC | 3 cut(s) | 553, 778, 801 |
| DpnII | GATC | 3 cut(s) | 551, 776, 799 |
| Eam1104I | CTCTTC | 2 cut(s) | 156, 573 |
| EarI | CTCTTC | 2 cut(s) | 156, 573 |
| Eco57I | CTGAAG | 1 cut(s) | 378 |
| Eco88I | CYCGRG | 1 cut(s) | 772 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 341 |
| EcoRI | GAATTC | 1 cut(s) | 863 |
| EcoRII | CCWGG | 1 cut(s) | 154 |
| FaeI | CATG | 3 cut(s) | 52, 542, 958 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 359, 391, 507, 539 |
| FaqI | GGGAC | 1 cut(s) | 907 |
| FatI | CATG | 3 cut(s) | 48, 538, 954 |
| FblI | GTMKAC | 1 cut(s) | 911 |
| Fnu4HI | GCNGC | 4 cut(s) | 274, 307, 720, 847 |
| FokI | GGATG | 5 cut(s) | 17, 29, 171, 335, 486 |
| Fsp4HI | GCNGC | 4 cut(s) | 274, 307, 720, 847 |
| FspBI | CTAG | 3 cut(s) | 393, 693, 833 |
| GluI | GCNGC | 4 cut(s) | 274, 307, 720, 847 |
| Hin1II | CATG | 3 cut(s) | 52, 542, 958 |
| HindIII | AAGCTT | 1 cut(s) | 282 |
| HphI | GGTGA | 2 cut(s) | 251, 500 |
| Hpy166II | GTNNAC | 3 cut(s) | 27, 104, 912 |
| Hpy188I | TCNGA | 3 cut(s) | 528, 715, 822 |
| Hpy188III | TCNNGA | 3 cut(s) | 36, 196, 565 |
| Hpy8I | GTNNAC | 3 cut(s) | 27, 104, 912 |
| HpyAV | CCTTC | 1 cut(s) | 682 |
| HpyCH4III | ACNGT | 3 cut(s) | 108, 250, 263 |
| HpyCH4V | TGCA | 7 cut(s) | 27, 122, 273, 467, 513, 842, 934 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 677, 855 |
| HpyF3I | CTNAG | 3 cut(s) | 342, 611, 714 |
| Hsp92II | CATG | 3 cut(s) | 52, 542, 958 |
| Kzo9I | GATC | 3 cut(s) | 551, 776, 799 |
| Lsp1109I | GCAGC | 4 cut(s) | 285, 293, 706, 833 |
| LweI | GCATC | 1 cut(s) | 464 |
| MaeI | CTAG | 3 cut(s) | 393, 693, 833 |
| MaeIII | GTNAC | 1 cut(s) | 395 |
| MalI | GATC | 3 cut(s) | 553, 778, 801 |
| MboI | GATC | 3 cut(s) | 551, 776, 799 |
| MboII | GAAGA | 9 cut(s) | 143, 167, 311, 338, 515, 590, 697, 771, 863 |
| MflI | RGATCY | 1 cut(s) | 776 |
| MhlI | GDGCHC | 1 cut(s) | 29 |
| MluCI | AATT | 6 cut(s) | 404, 419, 483, 558, 618, 863 |
| MmeI | TCCRAC | 3 cut(s) | 210, 419, 474 |
| MnlI | CCTC | 5 cut(s) | 337, 347, 574, 709, 816 |
| MseI | TTAA | 5 cut(s) | 21, 60, 729, 737, 852 |
| MslI | CAYNNNNRTG | 1 cut(s) | 973 |
| MspR9I | CCNGG | 1 cut(s) | 156 |
| Mva1269I | GAATGC | 1 cut(s) | 448 |
| MvaI | CCWGG | 1 cut(s) | 156 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 677, 855 |
| NdeII | GATC | 3 cut(s) | 551, 776, 799 |
| NlaIII | CATG | 3 cut(s) | 52, 542, 958 |
| PctI | GAATGC | 1 cut(s) | 448 |
| PflFI | GACNNNGTC | 1 cut(s) | 500 |
| PfoI | TCCNGGA | 1 cut(s) | 154 |
| PkrI | GCNGC | 4 cut(s) | 275, 308, 721, 848 |
| PshBI | ATTAAT | 1 cut(s) | 60 |
| PsiI | TTATAA | 1 cut(s) | 482 |
| Psp6I | CCWGG | 1 cut(s) | 154 |
| PspGI | CCWGG | 1 cut(s) | 154 |
| PsuI | RGATCY | 1 cut(s) | 776 |
| PsyI | GACNNNGTC | 1 cut(s) | 500 |
| RsaI | GTAC | 2 cut(s) | 662, 960 |
| RsaNI | GTAC | 2 cut(s) | 661, 959 |
| RseI | CAYNNNNRTG | 1 cut(s) | 973 |
| SaqAI | TTAA | 5 cut(s) | 21, 60, 729, 737, 852 |
| SatI | GCNGC | 4 cut(s) | 274, 307, 720, 847 |
| Sau3AI | GATC | 3 cut(s) | 551, 776, 799 |
| ScrFI | CCNGG | 1 cut(s) | 156 |
| SduI | GDGCHC | 1 cut(s) | 29 |
| SfaNI | GCATC | 1 cut(s) | 464 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 973 |
| Sse9I | AATT | 6 cut(s) | 404, 419, 483, 558, 618, 863 |
| SspMI | CTAG | 3 cut(s) | 393, 693, 833 |
| StyD4I | CCNGG | 1 cut(s) | 154 |
| TaaI | ACNGT | 3 cut(s) | 108, 250, 263 |
| TaqI | TCGA | 3 cut(s) | 554, 806, 888 |
| TasI | AATT | 6 cut(s) | 404, 419, 483, 558, 618, 863 |
| Tru1I | TTAA | 5 cut(s) | 21, 60, 729, 737, 852 |
| Tru9I | TTAA | 5 cut(s) | 21, 60, 729, 737, 852 |
| TscAI | CASTG | 3 cut(s) | 217, 268, 346 |
| TseI | GCWGC | 4 cut(s) | 273, 306, 719, 846 |
| TspDTI | ATGAA | 4 cut(s) | 37, 131, 339, 399 |
| TspRI | CASTG | 3 cut(s) | 217, 268, 346 |
| Tth111I | GACNNNGTC | 1 cut(s) | 500 |
| VneI | GTGCAC | 1 cut(s) | 25 |
| VspI | ATTAAT | 1 cut(s) | 60 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 341 |
| XapI | RAATTY | 2 cut(s) | 419, 863 |
| XmiI | GTMKAC | 1 cut(s) | 911 |
| XspI | CTAG | 3 cut(s) | 393, 693, 833 |