isoform X1
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 554 |
| Acc65I | GGTACC | 1 cut(s) | 950 |
| AccB1I | GGYRCC | 1 cut(s) | 950 |
| AccI | GTMKAC | 1 cut(s) | 146 |
| AciI | CCGC | 1 cut(s) | 499 |
| AfaI | GTAC | 6 cut(s) | 32, 99, 497, 658, 668, 952 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 112, 119 |
| AgsI | TTSAA | 3 cut(s) | 182, 434, 460 |
| AjnI | CCWGG | 1 cut(s) | 763 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 681, 713 |
| AluBI | AGCT | 3 cut(s) | 25, 139, 916 |
| AluI | AGCT | 3 cut(s) | 25, 139, 916 |
| Alw21I | GWGCWC | 1 cut(s) | 260 |
| AoxI | GGCC | 1 cut(s) | 219 |
| ApeKI | GCWGC | 2 cut(s) | 47, 913 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 693 |
| Asp718I | GGTACC | 1 cut(s) | 950 |
| AspS9I | GGNCC | 2 cut(s) | 220, 421 |
| AsuHPI | GGTGA | 3 cut(s) | 50, 716, 886 |
| AvaII | GGWCC | 1 cut(s) | 421 |
| BanI | GGYRCC | 1 cut(s) | 950 |
| Bbv12I | GWGCWC | 1 cut(s) | 260 |
| BbvCI | CCTCAGC | 1 cut(s) | 140 |
| BbvI | GCAGC | 2 cut(s) | 59, 925 |
| BccI | CCATC | 3 cut(s) | 478, 532, 634 |
| BceAI | ACGGC | 1 cut(s) | 675 |
| BciT130I | CCWGG | 1 cut(s) | 765 |
| BclI | TGATCA | 1 cut(s) | 61 |
| BfaI | CTAG | 2 cut(s) | 321, 684 |
| BfmI | CTRYAG | 1 cut(s) | 603 |
| BisI | GCNGC | 2 cut(s) | 48, 914 |
| BlsI | GCNGC | 2 cut(s) | 49, 915 |
| Bme1390I | CCNGG | 1 cut(s) | 765 |
| Bme18I | GGWCC | 1 cut(s) | 421 |
| BmgT120I | GGNCC | 2 cut(s) | 220, 421 |
| BmiI | GGNNCC | 1 cut(s) | 952 |
| BmrFI | CCNGG | 1 cut(s) | 765 |
| BmsI | GCATC | 7 cut(s) | 78, 344, 697, 823, 871, 928, 935 |
| Bpu10I | CCTNAGC | 1 cut(s) | 140 |
| BsaAI | YACGTR | 1 cut(s) | 101 |
| BsaBI | GATNNNNATC | 1 cut(s) | 942 |
| BsaJI | CCNNGG | 2 cut(s) | 763, 933 |
| BsaWI | WCCGGW | 1 cut(s) | 112 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 36, 66 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 112, 119 |
| Bse8I | GATNNNNATC | 1 cut(s) | 942 |
| BseBI | CCWGG | 1 cut(s) | 765 |
| BseDI | CCNNGG | 2 cut(s) | 763, 933 |
| BseGI | GGATG | 5 cut(s) | 256, 359, 645, 846, 943 |
| BseJI | GATNNNNATC | 1 cut(s) | 942 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 112, 119 |
| BseMII | CTCAG | 2 cut(s) | 131, 737 |
| BseXI | GCAGC | 2 cut(s) | 59, 925 |
| BshFI | GGCC | 1 cut(s) | 221 |
| BshNI | GGYRCC | 1 cut(s) | 950 |
| BsiHKAI | GWGCWC | 1 cut(s) | 260 |
| BsiSI | CCGG | 1 cut(s) | 113 |
| BsiWI | CGTACG | 1 cut(s) | 656 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 112, 119 |
| BsnI | GGCC | 1 cut(s) | 221 |
| Bsp1286I | GDGCHC | 1 cut(s) | 260 |
| Bsp143I | GATC | 1 cut(s) | 61 |
| BspACI | CCGC | 1 cut(s) | 499 |
| BspANI | GGCC | 1 cut(s) | 221 |
| BspCNI | CTCAG | 2 cut(s) | 132, 736 |
| BspLI | GGNNCC | 1 cut(s) | 952 |
| BspT107I | GGYRCC | 1 cut(s) | 950 |
| BssECI | CCNNGG | 2 cut(s) | 763, 933 |
| BssMI | GATC | 1 cut(s) | 61 |
| BssNAI | GTATAC | 1 cut(s) | 147 |
| BssT1I | CCWWGG | 1 cut(s) | 933 |
| Bst1107I | GTATAC | 1 cut(s) | 147 |
| Bst2UI | CCWGG | 1 cut(s) | 765 |
| Bst4CI | ACNGT | 3 cut(s) | 8, 151, 671 |
| Bst6I | CTCTTC | 2 cut(s) | 309, 441 |
| BstBAI | YACGTR | 1 cut(s) | 101 |
| BstC8I | GCNNGC | 2 cut(s) | 521, 681 |
| BstDEI | CTNAG | 3 cut(s) | 140, 546, 723 |
| BstF5I | GGATG | 5 cut(s) | 256, 359, 645, 846, 943 |
| BstKTI | GATC | 1 cut(s) | 64 |
| BstMBI | GATC | 1 cut(s) | 61 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 938 |
| BstNI | CCWGG | 1 cut(s) | 765 |
| BstSCI | CCNGG | 1 cut(s) | 763 |
| BstSFI | CTRYAG | 1 cut(s) | 603 |
| BstV1I | GCAGC | 2 cut(s) | 59, 925 |
| BstZ17I | GTATAC | 1 cut(s) | 147 |
| BsuRI | GGCC | 1 cut(s) | 221 |
| BtsCI | GGATG | 5 cut(s) | 256, 359, 645, 846, 943 |
| BtsI | GCAGTG | 1 cut(s) | 756 |
| BtsIMutI | CAGTG | 1 cut(s) | 756 |
| Cac8I | GCNNGC | 2 cut(s) | 521, 681 |
| Cfr13I | GGNCC | 2 cut(s) | 220, 421 |
| Csp6I | GTAC | 6 cut(s) | 31, 98, 496, 657, 667, 951 |
| CviAII | CATG | 2 cut(s) | 506, 617 |
| CviJI | RGCY | 7 cut(s) | 25, 139, 221, 602, 662, 768, 916 |
| CviKI_1 | RGCY | 7 cut(s) | 25, 139, 221, 602, 662, 768, 916 |
| CviQI | GTAC | 6 cut(s) | 31, 98, 496, 657, 667, 951 |
| DdeI | CTNAG | 3 cut(s) | 140, 546, 723 |
| DpnI | GATC | 1 cut(s) | 63 |
| DpnII | GATC | 1 cut(s) | 61 |
| Eam1104I | CTCTTC | 2 cut(s) | 309, 441 |
| EarI | CTCTTC | 2 cut(s) | 309, 441 |
| Eco130I | CCWWGG | 1 cut(s) | 933 |
| Eco47I | GGWCC | 1 cut(s) | 421 |
| EcoRII | CCWGG | 1 cut(s) | 763 |
| EcoT14I | CCWWGG | 1 cut(s) | 933 |
| ErhI | CCWWGG | 1 cut(s) | 933 |
| FaeI | CATG | 2 cut(s) | 509, 620 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 900, 932 |
| FatI | CATG | 2 cut(s) | 505, 616 |
| FbaI | TGATCA | 1 cut(s) | 61 |
| FblI | GTMKAC | 1 cut(s) | 146 |
| Fnu4HI | GCNGC | 2 cut(s) | 48, 914 |
| FokI | GGATG | 5 cut(s) | 263, 366, 652, 853, 950 |
| Fsp4HI | GCNGC | 2 cut(s) | 48, 914 |
| FspBI | CTAG | 2 cut(s) | 321, 684 |
| GluI | GCNGC | 2 cut(s) | 48, 914 |
| HaeIII | GGCC | 1 cut(s) | 221 |
| HapII | CCGG | 1 cut(s) | 113 |
| Hin1II | CATG | 2 cut(s) | 509, 620 |
| HindIII | AAGCTT | 1 cut(s) | 23 |
| HinfI | GANTC | 6 cut(s) | 317, 586, 689, 713, 755, 943 |
| HpaII | CCGG | 1 cut(s) | 113 |
| HphI | GGTGA | 3 cut(s) | 50, 716, 886 |
| Hpy166II | GTNNAC | 2 cut(s) | 31, 147 |
| Hpy188I | TCNGA | 3 cut(s) | 235, 286, 631 |
| Hpy188III | TCNNGA | 4 cut(s) | 158, 179, 581, 778 |
| Hpy8I | GTNNAC | 2 cut(s) | 31, 147 |
| HpyAV | CCTTC | 4 cut(s) | 35, 592, 838, 898 |
| HpyCH4III | ACNGT | 3 cut(s) | 8, 151, 671 |
| HpyCH4IV | ACGT | 1 cut(s) | 100 |
| HpyCH4V | TGCA | 5 cut(s) | 20, 476, 523, 861, 926 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 938 |
| HpyF3I | CTNAG | 3 cut(s) | 140, 546, 723 |
| HpySE526I | ACGT | 1 cut(s) | 100 |
| Hsp92II | CATG | 2 cut(s) | 509, 620 |
| KpnI | GGTACC | 1 cut(s) | 954 |
| Ksp22I | TGATCA | 1 cut(s) | 61 |
| Kzo9I | GATC | 1 cut(s) | 61 |
| LmnI | GCTCC | 1 cut(s) | 44 |
| Lsp1109I | GCAGC | 2 cut(s) | 59, 925 |
| LweI | GCATC | 7 cut(s) | 78, 344, 697, 823, 871, 928, 935 |
| MaeI | CTAG | 2 cut(s) | 321, 684 |
| MaeII | ACGT | 1 cut(s) | 100 |
| MaeIII | GTNAC | 5 cut(s) | 8, 101, 299, 973, 1003 |
| MalI | GATC | 1 cut(s) | 63 |
| MboI | GATC | 1 cut(s) | 61 |
| MboII | GAAGA | 4 cut(s) | 200, 211, 326, 458 |
| MfeI | CAATTG | 1 cut(s) | 477 |
| MhlI | GDGCHC | 1 cut(s) | 260 |
| MluCI | AATT | 4 cut(s) | 91, 403, 461, 477 |
| MlyI | GAGTC | 1 cut(s) | 326 |
| MnlI | CCTC | 4 cut(s) | 135, 361, 372, 637 |
| MroXI | GAANNNNTTC | 1 cut(s) | 693 |
| MspA1I | CMGCKG | 1 cut(s) | 501 |
| MspI | CCGG | 1 cut(s) | 113 |
| MspR9I | CCNGG | 1 cut(s) | 765 |
| MunI | CAATTG | 1 cut(s) | 477 |
| MvaI | CCWGG | 1 cut(s) | 765 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 938 |
| NdeII | GATC | 1 cut(s) | 61 |
| NlaIII | CATG | 2 cut(s) | 509, 620 |
| NlaIV | GGNNCC | 1 cut(s) | 952 |
| NmuCI | GTSAC | 1 cut(s) | 101 |
| PdmI | GAANNNNTTC | 1 cut(s) | 693 |
| PfeI | GAWTC | 5 cut(s) | 586, 689, 713, 755, 943 |
| Pfl23II | CGTACG | 1 cut(s) | 656 |
| PkrI | GCNGC | 2 cut(s) | 49, 915 |
| PleI | GAGTC | 1 cut(s) | 325 |
| PpsI | GAGTC | 1 cut(s) | 325 |
| Ppu21I | YACGTR | 1 cut(s) | 101 |
| PsiI | TTATAA | 1 cut(s) | 554 |
| Psp6I | CCWGG | 1 cut(s) | 763 |
| PspGI | CCWGG | 1 cut(s) | 763 |
| PspLI | CGTACG | 1 cut(s) | 656 |
| PspN4I | GGNNCC | 1 cut(s) | 952 |
| PspPI | GGNCC | 2 cut(s) | 220, 421 |
| RsaI | GTAC | 6 cut(s) | 32, 99, 497, 658, 668, 952 |
| RsaNI | GTAC | 6 cut(s) | 31, 98, 496, 657, 667, 951 |
| SatI | GCNGC | 2 cut(s) | 48, 914 |
| Sau3AI | GATC | 1 cut(s) | 61 |
| Sau96I | GGNCC | 2 cut(s) | 220, 421 |
| SchI | GAGTC | 1 cut(s) | 326 |
| ScrFI | CCNGG | 1 cut(s) | 765 |
| SduI | GDGCHC | 1 cut(s) | 260 |
| SfaNI | GCATC | 7 cut(s) | 78, 344, 697, 823, 871, 928, 935 |
| SfcI | CTRYAG | 1 cut(s) | 603 |
| SinI | GGWCC | 1 cut(s) | 421 |
| Sse9I | AATT | 4 cut(s) | 91, 403, 461, 477 |
| SsiI | CCGC | 1 cut(s) | 499 |
| SspMI | CTAG | 2 cut(s) | 321, 684 |
| StyD4I | CCNGG | 1 cut(s) | 763 |
| StyI | CCWWGG | 1 cut(s) | 933 |
| TaaI | ACNGT | 3 cut(s) | 8, 151, 671 |
| TaiI | ACGT | 1 cut(s) | 103 |
| TaqII | GACCGA | 1 cut(s) | 120 |
| TasI | AATT | 4 cut(s) | 91, 403, 461, 477 |
| TatI | WGTACW | 1 cut(s) | 30 |
| TfiI | GAWTC | 5 cut(s) | 586, 689, 713, 755, 943 |
| TscAI | CASTG | 1 cut(s) | 756 |
| TseFI | GTSAC | 1 cut(s) | 101 |
| TseI | GCWGC | 2 cut(s) | 47, 913 |
| Tsp45I | GTSAC | 1 cut(s) | 101 |
| TspDTI | ATGAA | 8 cut(s) | 45, 201, 212, 351, 804, 857, 865, 880 |
| TspRI | CASTG | 1 cut(s) | 756 |
| VpaK11BI | GGWCC | 1 cut(s) | 421 |
| XmiI | GTMKAC | 1 cut(s) | 146 |
| XmnI | GAANNNNTTC | 1 cut(s) | 693 |
| XspI | CTAG | 2 cut(s) | 321, 684 |