isoform X1
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 147 |
| AciI | CCGC | 3 cut(s) | 76, 168, 687 |
| AclI | AACGTT | 1 cut(s) | 316 |
| AclWI | GGATC | 1 cut(s) | 267 |
| AcoI | YGGCCR | 3 cut(s) | 169, 186, 688 |
| AcsI | RAATTY | 2 cut(s) | 59, 129 |
| AfaI | GTAC | 1 cut(s) | 500 |
| AgsI | TTSAA | 5 cut(s) | 70, 140, 512, 520, 640 |
| AjnI | CCWGG | 3 cut(s) | 215, 406, 632 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 44, 76 |
| AluBI | AGCT | 4 cut(s) | 464, 528, 676, 726 |
| AluI | AGCT | 4 cut(s) | 464, 528, 676, 726 |
| AlwI | GGATC | 1 cut(s) | 267 |
| AoxI | GGCC | 5 cut(s) | 169, 186, 445, 629, 688 |
| ApeKI | GCWGC | 3 cut(s) | 452, 464, 726 |
| ApoI | RAATTY | 2 cut(s) | 59, 129 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 59 |
| AspS9I | GGNCC | 1 cut(s) | 630 |
| BaeGI | GKGCMC | 1 cut(s) | 710 |
| BalI | TGGCCA | 1 cut(s) | 188 |
| BanI | GGYRCC | 1 cut(s) | 147 |
| BbsI | GAAGAC | 1 cut(s) | 561 |
| BbvI | GCAGC | 3 cut(s) | 439, 451, 713 |
| BccI | CCATC | 1 cut(s) | 283 |
| BceAI | ACGGC | 3 cut(s) | 135, 460, 675 |
| BciT130I | CCWGG | 3 cut(s) | 217, 408, 634 |
| BfaI | CTAG | 1 cut(s) | 402 |
| BfmI | CTRYAG | 2 cut(s) | 324, 529 |
| BisI | GCNGC | 5 cut(s) | 169, 453, 465, 688, 727 |
| BlsI | GCNGC | 5 cut(s) | 170, 454, 466, 689, 728 |
| BmcAI | AGTACT | 1 cut(s) | 500 |
| Bme1390I | CCNGG | 3 cut(s) | 217, 408, 634 |
| BmgT120I | GGNCC | 1 cut(s) | 630 |
| BmiI | GGNNCC | 1 cut(s) | 149 |
| BmrFI | CCNGG | 3 cut(s) | 217, 408, 634 |
| BmsI | GCATC | 1 cut(s) | 228 |
| BpiI | GAAGAC | 1 cut(s) | 561 |
| Bpu10I | CCTNAGC | 1 cut(s) | 83 |
| BpuEI | CTTGAG | 1 cut(s) | 248 |
| BsaJI | CCNNGG | 2 cut(s) | 406, 632 |
| Bse1I | ACTGG | 1 cut(s) | 134 |
| BseBI | CCWGG | 3 cut(s) | 217, 408, 634 |
| BseDI | CCNNGG | 2 cut(s) | 406, 632 |
| BseGI | GGATG | 1 cut(s) | 310 |
| BseMII | CTCAG | 1 cut(s) | 93 |
| BseNI | ACTGG | 1 cut(s) | 134 |
| BseRI | GAGGAG | 1 cut(s) | 313 |
| BseSI | GKGCMC | 1 cut(s) | 710 |
| BseX3I | CGGCCG | 2 cut(s) | 169, 688 |
| BseXI | GCAGC | 3 cut(s) | 439, 451, 713 |
| BsgI | GTGCAG | 2 cut(s) | 383, 712 |
| Bsh1285I | CGRYCG | 2 cut(s) | 172, 691 |
| BshFI | GGCC | 5 cut(s) | 171, 188, 447, 631, 690 |
| BshNI | GGYRCC | 1 cut(s) | 147 |
| BsiEI | CGRYCG | 2 cut(s) | 172, 691 |
| BsnI | GGCC | 5 cut(s) | 171, 188, 447, 631, 690 |
| Bsp1286I | GDGCHC | 1 cut(s) | 710 |
| Bsp143I | GATC | 4 cut(s) | 259, 366, 420, 645 |
| BspACI | CCGC | 3 cut(s) | 76, 168, 687 |
| BspANI | GGCC | 5 cut(s) | 171, 188, 447, 631, 690 |
| BspCNI | CTCAG | 1 cut(s) | 94 |
| BspLI | GGNNCC | 1 cut(s) | 149 |
| BspPI | GGATC | 1 cut(s) | 267 |
| BspQI | GCTCTTC | 2 cut(s) | 518, 716 |
| BspT107I | GGYRCC | 1 cut(s) | 147 |
| BsrI | ACTGG | 1 cut(s) | 134 |
| BssECI | CCNNGG | 2 cut(s) | 406, 632 |
| BssMI | GATC | 4 cut(s) | 259, 366, 420, 645 |
| Bst2UI | CCWGG | 3 cut(s) | 217, 408, 634 |
| Bst4CI | ACNGT | 1 cut(s) | 533 |
| Bst6I | CTCTTC | 3 cut(s) | 518, 608, 716 |
| BstDEI | CTNAG | 2 cut(s) | 83, 102 |
| BstF5I | GGATG | 1 cut(s) | 310 |
| BstKTI | GATC | 4 cut(s) | 262, 369, 423, 648 |
| BstMBI | GATC | 4 cut(s) | 259, 366, 420, 645 |
| BstMCI | CGRYCG | 2 cut(s) | 172, 691 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 238, 283, 361, 461, 693 |
| BstNI | CCWGG | 3 cut(s) | 217, 408, 634 |
| BstSCI | CCNGG | 3 cut(s) | 215, 406, 632 |
| BstSFI | CTRYAG | 2 cut(s) | 324, 529 |
| BstSLI | GKGCMC | 1 cut(s) | 710 |
| BstV1I | GCAGC | 3 cut(s) | 439, 451, 713 |
| BstV2I | GAAGAC | 1 cut(s) | 561 |
| BstZI | CGGCCG | 2 cut(s) | 169, 688 |
| BsuRI | GGCC | 5 cut(s) | 171, 188, 447, 631, 690 |
| BtsCI | GGATG | 1 cut(s) | 310 |
| BtsIMutI | CAGTG | 1 cut(s) | 394 |
| Cfr13I | GGNCC | 1 cut(s) | 630 |
| Csp6I | GTAC | 1 cut(s) | 499 |
| CviQI | GTAC | 1 cut(s) | 499 |
| DdeI | CTNAG | 2 cut(s) | 83, 102 |
| DpnI | GATC | 4 cut(s) | 261, 368, 422, 647 |
| DpnII | GATC | 4 cut(s) | 259, 366, 420, 645 |
| EaeI | YGGCCR | 3 cut(s) | 169, 186, 688 |
| EagI | CGGCCG | 2 cut(s) | 169, 688 |
| Eam1104I | CTCTTC | 3 cut(s) | 518, 608, 716 |
| EarI | CTCTTC | 3 cut(s) | 518, 608, 716 |
| EclXI | CGGCCG | 2 cut(s) | 169, 688 |
| Eco52I | CGGCCG | 2 cut(s) | 169, 688 |
| EcoRI | GAATTC | 1 cut(s) | 59 |
| EcoRII | CCWGG | 3 cut(s) | 215, 406, 632 |
| Fnu4HI | GCNGC | 5 cut(s) | 169, 453, 465, 688, 727 |
| FokI | GGATG | 1 cut(s) | 317 |
| Fsp4HI | GCNGC | 5 cut(s) | 169, 453, 465, 688, 727 |
| FspBI | CTAG | 1 cut(s) | 402 |
| GluI | GCNGC | 5 cut(s) | 169, 453, 465, 688, 727 |
| HaeIII | GGCC | 5 cut(s) | 171, 188, 447, 631, 690 |
| HinfI | GANTC | 4 cut(s) | 203, 334, 578, 679 |
| Hpy188I | TCNGA | 3 cut(s) | 264, 472, 577 |
| Hpy188III | TCNNGA | 2 cut(s) | 370, 520 |
| HpyAV | CCTTC | 2 cut(s) | 49, 621 |
| HpyCH4III | ACNGT | 1 cut(s) | 533 |
| HpyCH4IV | ACGT | 1 cut(s) | 316 |
| HpyCH4V | TGCA | 7 cut(s) | 38, 155, 200, 364, 455, 696, 729 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 238, 283, 361, 461, 693 |
| HpyF3I | CTNAG | 2 cut(s) | 83, 102 |
| HpySE526I | ACGT | 1 cut(s) | 316 |
| Kzo9I | GATC | 4 cut(s) | 259, 366, 420, 645 |
| LguI | GCTCTTC | 2 cut(s) | 518, 716 |
| LmnI | GCTCC | 1 cut(s) | 283 |
| LpnPI | CCDG | 9 cut(s) | 147, 150, 202, 229, 280, 393, 420, 619, 646 |
| Lsp1109I | GCAGC | 3 cut(s) | 439, 451, 713 |
| LweI | GCATC | 1 cut(s) | 228 |
| MaeI | CTAG | 1 cut(s) | 402 |
| MaeII | ACGT | 1 cut(s) | 316 |
| MaeIII | GTNAC | 1 cut(s) | 618 |
| MalI | GATC | 4 cut(s) | 261, 368, 422, 647 |
| MboI | GATC | 4 cut(s) | 259, 366, 420, 645 |
| MboII | GAAGA | 8 cut(s) | 20, 31, 359, 535, 561, 564, 625, 733 |
| MfeI | CAATTG | 1 cut(s) | 424 |
| MhlI | GDGCHC | 1 cut(s) | 710 |
| MlsI | TGGCCA | 1 cut(s) | 188 |
| MluCI | AATT | 6 cut(s) | 12, 59, 70, 129, 270, 424 |
| MluNI | TGGCCA | 1 cut(s) | 188 |
| MlyI | GAGTC | 1 cut(s) | 328 |
| MmeI | TCCRAC | 2 cut(s) | 237, 299 |
| MnlI | CCTC | 9 cut(s) | 85, 291, 294, 301, 450, 609, 612, 655, 747 |
| Mox20I | TGGCCA | 1 cut(s) | 188 |
| MroXI | GAANNNNTTC | 1 cut(s) | 59 |
| MscI | TGGCCA | 1 cut(s) | 188 |
| MseI | TTAA | 4 cut(s) | 15, 30, 210, 273 |
| MslI | CAYNNNNRTG | 1 cut(s) | 387 |
| Msp20I | TGGCCA | 1 cut(s) | 188 |
| MspR9I | CCNGG | 3 cut(s) | 217, 408, 634 |
| MunI | CAATTG | 1 cut(s) | 424 |
| MvaI | CCWGG | 3 cut(s) | 217, 408, 634 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 238, 283, 361, 461, 693 |
| NdeII | GATC | 4 cut(s) | 259, 366, 420, 645 |
| NlaIV | GGNNCC | 1 cut(s) | 149 |
| NmuCI | GTSAC | 1 cut(s) | 618 |
| PciSI | GCTCTTC | 2 cut(s) | 518, 716 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 688 |
| PdmI | GAANNNNTTC | 1 cut(s) | 59 |
| PfeI | GAWTC | 3 cut(s) | 203, 578, 679 |
| PfoI | TCCNGGA | 1 cut(s) | 215 |
| PkrI | GCNGC | 5 cut(s) | 170, 454, 466, 689, 728 |
| PleI | GAGTC | 1 cut(s) | 328 |
| PpsI | GAGTC | 1 cut(s) | 328 |
| Psp1406I | AACGTT | 1 cut(s) | 316 |
| Psp6I | CCWGG | 3 cut(s) | 215, 406, 632 |
| PspGI | CCWGG | 3 cut(s) | 215, 406, 632 |
| PspN4I | GGNNCC | 1 cut(s) | 149 |
| PspPI | GGNCC | 1 cut(s) | 630 |
| RsaI | GTAC | 1 cut(s) | 500 |
| RsaNI | GTAC | 1 cut(s) | 499 |
| RseI | CAYNNNNRTG | 1 cut(s) | 387 |
| SapI | GCTCTTC | 2 cut(s) | 518, 716 |
| SaqAI | TTAA | 4 cut(s) | 15, 30, 210, 273 |
| SatI | GCNGC | 5 cut(s) | 169, 453, 465, 688, 727 |
| Sau3AI | GATC | 4 cut(s) | 259, 366, 420, 645 |
| Sau96I | GGNCC | 1 cut(s) | 630 |
| ScaI | AGTACT | 1 cut(s) | 500 |
| SchI | GAGTC | 1 cut(s) | 328 |
| ScrFI | CCNGG | 3 cut(s) | 217, 408, 634 |
| SduI | GDGCHC | 1 cut(s) | 710 |
| SfaNI | GCATC | 1 cut(s) | 228 |
| SfcI | CTRYAG | 2 cut(s) | 324, 529 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 387 |
| SmlI | CTYRAG | 1 cut(s) | 227 |
| SmoI | CTYRAG | 1 cut(s) | 227 |
| Sse9I | AATT | 6 cut(s) | 12, 59, 70, 129, 270, 424 |
| SsiI | CCGC | 3 cut(s) | 76, 168, 687 |
| SspMI | CTAG | 1 cut(s) | 402 |
| StyD4I | CCNGG | 3 cut(s) | 215, 406, 632 |
| TaaI | ACNGT | 1 cut(s) | 533 |
| TaiI | ACGT | 1 cut(s) | 319 |
| TaqI | TCGA | 2 cut(s) | 369, 666 |
| TasI | AATT | 6 cut(s) | 12, 59, 70, 129, 270, 424 |
| TatI | WGTACW | 1 cut(s) | 498 |
| TauI | GCSGC | 2 cut(s) | 171, 690 |
| TfiI | GAWTC | 3 cut(s) | 203, 578, 679 |
| Tru1I | TTAA | 4 cut(s) | 15, 30, 210, 273 |
| Tru9I | TTAA | 4 cut(s) | 15, 30, 210, 273 |
| TscAI | CASTG | 1 cut(s) | 394 |
| TseFI | GTSAC | 1 cut(s) | 618 |
| TseI | GCWGC | 3 cut(s) | 452, 464, 726 |
| Tsp45I | GTSAC | 1 cut(s) | 618 |
| TspGWI | ACGGA | 1 cut(s) | 533 |
| TspRI | CASTG | 1 cut(s) | 394 |
| XapI | RAATTY | 2 cut(s) | 59, 129 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 141 |
| XmnI | GAANNNNTTC | 1 cut(s) | 59 |
| XspI | CTAG | 1 cut(s) | 402 |
| ZrmI | AGTACT | 1 cut(s) | 500 |