isoform X1
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 14 |
| AciI | CCGC | 3 cut(s) | 12, 231, 325 |
| AclWI | GGATC | 1 cut(s) | 400 |
| AcsI | RAATTY | 1 cut(s) | 317 |
| AcuI | CTGAAG | 1 cut(s) | 180 |
| AfaI | GTAC | 1 cut(s) | 503 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 145 |
| AflIII | ACRYGT | 1 cut(s) | 410 |
| AgsI | TTSAA | 8 cut(s) | 58, 101, 167, 206, 274, 419, 448, 475 |
| AluBI | AGCT | 6 cut(s) | 108, 256, 287, 385, 432, 482 |
| AluI | AGCT | 6 cut(s) | 108, 256, 287, 385, 432, 482 |
| AlwI | GGATC | 1 cut(s) | 400 |
| Ama87I | CYCGRG | 1 cut(s) | 239 |
| ApeKI | GCWGC | 2 cut(s) | 108, 560 |
| ApoI | RAATTY | 1 cut(s) | 317 |
| AvaI | CYCGRG | 1 cut(s) | 239 |
| BanI | GGYRCC | 1 cut(s) | 14 |
| BbvI | GCAGC | 2 cut(s) | 95, 547 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 206, 240 |
| BfaI | CTAG | 3 cut(s) | 195, 534, 569 |
| BisI | GCNGC | 2 cut(s) | 109, 561 |
| BlsI | GCNGC | 2 cut(s) | 110, 562 |
| BmeT110I | CYCGRG | 1 cut(s) | 239 |
| BmiI | GGNNCC | 3 cut(s) | 16, 235, 345 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 240, 272 |
| BsaJI | CCNNGG | 1 cut(s) | 452 |
| BsaWI | WCCGGW | 1 cut(s) | 113 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 145 |
| BseDI | CCNNGG | 1 cut(s) | 452 |
| BseGI | GGATG | 2 cut(s) | 130, 358 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 145 |
| BseMII | CTCAG | 3 cut(s) | 135, 271, 546 |
| BseXI | GCAGC | 2 cut(s) | 95, 547 |
| BsgI | GTGCAG | 1 cut(s) | 546 |
| BshNI | GGYRCC | 1 cut(s) | 14 |
| BsiHKCI | CYCGRG | 1 cut(s) | 239 |
| BsiSI | CCGG | 1 cut(s) | 114 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 145 |
| BsoBI | CYCGRG | 1 cut(s) | 239 |
| Bsp143I | GATC | 1 cut(s) | 392 |
| BspACI | CCGC | 3 cut(s) | 12, 231, 325 |
| BspCNI | CTCAG | 3 cut(s) | 136, 270, 547 |
| BspLI | GGNNCC | 3 cut(s) | 16, 235, 345 |
| BspPI | GGATC | 1 cut(s) | 400 |
| BspT107I | GGYRCC | 1 cut(s) | 14 |
| BssECI | CCNNGG | 1 cut(s) | 452 |
| BssMI | GATC | 1 cut(s) | 392 |
| BssT1I | CCWWGG | 1 cut(s) | 452 |
| Bst4CI | ACNGT | 1 cut(s) | 52 |
| Bst6I | CTCTTC | 1 cut(s) | 414 |
| BstDEI | CTNAG | 3 cut(s) | 144, 257, 555 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 143 |
| BstF5I | GGATG | 2 cut(s) | 130, 358 |
| BstKTI | GATC | 1 cut(s) | 395 |
| BstMBI | GATC | 1 cut(s) | 392 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 518 |
| BstNSI | RCATGY | 1 cut(s) | 414 |
| BstV1I | GCAGC | 2 cut(s) | 95, 547 |
| BtsCI | GGATG | 2 cut(s) | 130, 358 |
| BtsIMutI | CAGTG | 2 cut(s) | 141, 590 |
| CseI | GACGC | 1 cut(s) | 590 |
| Csp6I | GTAC | 1 cut(s) | 502 |
| CviAII | CATG | 3 cut(s) | 322, 380, 411 |
| CviQI | GTAC | 1 cut(s) | 502 |
| DdeI | CTNAG | 3 cut(s) | 144, 257, 555 |
| DpnI | GATC | 1 cut(s) | 394 |
| DpnII | GATC | 1 cut(s) | 392 |
| Eam1104I | CTCTTC | 1 cut(s) | 414 |
| EarI | CTCTTC | 1 cut(s) | 414 |
| Eco130I | CCWWGG | 1 cut(s) | 452 |
| Eco57I | CTGAAG | 1 cut(s) | 180 |
| Eco88I | CYCGRG | 1 cut(s) | 239 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 143 |
| EcoRI | GAATTC | 1 cut(s) | 317 |
| EcoT14I | CCWWGG | 1 cut(s) | 452 |
| ErhI | CCWWGG | 1 cut(s) | 452 |
| FaeI | CATG | 3 cut(s) | 325, 383, 414 |
| FaiI | YATR | 8 cut(s) | 266, 323, 381, 412, 435, 486, 497, 549 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 161, 193 |
| FatI | CATG | 3 cut(s) | 321, 379, 410 |
| Fnu4HI | GCNGC | 2 cut(s) | 109, 561 |
| FokI | GGATG | 2 cut(s) | 137, 365 |
| Fsp4HI | GCNGC | 2 cut(s) | 109, 561 |
| FspBI | CTAG | 3 cut(s) | 195, 534, 569 |
| GluI | GCNGC | 2 cut(s) | 109, 561 |
| HapII | CCGG | 1 cut(s) | 114 |
| HgaI | GACGC | 1 cut(s) | 590 |
| Hin1II | CATG | 3 cut(s) | 325, 383, 414 |
| HpaII | CCGG | 1 cut(s) | 114 |
| Hpy188I | TCNGA | 3 cut(s) | 248, 260, 556 |
| Hpy188III | TCNNGA | 1 cut(s) | 406 |
| HpyAV | CCTTC | 1 cut(s) | 523 |
| HpyCH4III | ACNGT | 1 cut(s) | 52 |
| HpyCH4V | TGCA | 3 cut(s) | 75, 373, 563 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 518 |
| HpyF3I | CTNAG | 3 cut(s) | 144, 257, 555 |
| Hsp92II | CATG | 3 cut(s) | 325, 383, 414 |
| Kzo9I | GATC | 1 cut(s) | 392 |
| LmnI | GCTCC | 1 cut(s) | 116 |
| LpnPI | CCDG | 1 cut(s) | 127 |
| Lsp1109I | GCAGC | 2 cut(s) | 95, 547 |
| MaeI | CTAG | 3 cut(s) | 195, 534, 569 |
| MaeIII | GTNAC | 1 cut(s) | 197 |
| MalI | GATC | 1 cut(s) | 394 |
| MboI | GATC | 1 cut(s) | 392 |
| MboII | GAAGA | 4 cut(s) | 70, 113, 140, 431 |
| MfeI | CAATTG | 1 cut(s) | 336 |
| MluCI | AATT | 4 cut(s) | 317, 336, 399, 459 |
| MmeI | TCCRAC | 1 cut(s) | 12 |
| MnlI | CCTC | 4 cut(s) | 139, 149, 415, 550 |
| MseI | TTAA | 2 cut(s) | 584, 607 |
| MspI | CCGG | 1 cut(s) | 114 |
| MunI | CAATTG | 1 cut(s) | 336 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 518 |
| NdeII | GATC | 1 cut(s) | 392 |
| NlaIII | CATG | 3 cut(s) | 325, 383, 414 |
| NlaIV | GGNNCC | 3 cut(s) | 16, 235, 345 |
| NspI | RCATGY | 1 cut(s) | 414 |
| PciI | ACATGT | 1 cut(s) | 410 |
| PkrI | GCNGC | 2 cut(s) | 110, 562 |
| PscI | ACATGT | 1 cut(s) | 410 |
| PspN4I | GGNNCC | 3 cut(s) | 16, 235, 345 |
| RsaI | GTAC | 1 cut(s) | 503 |
| RsaNI | GTAC | 1 cut(s) | 502 |
| SaqAI | TTAA | 2 cut(s) | 584, 607 |
| SatI | GCNGC | 2 cut(s) | 109, 561 |
| Sau3AI | GATC | 1 cut(s) | 392 |
| SetI | ASST | 8 cut(s) | 110, 141, 258, 289, 387, 434, 484, 510 |
| Sse9I | AATT | 4 cut(s) | 317, 336, 399, 459 |
| SsiI | CCGC | 3 cut(s) | 12, 231, 325 |
| SspMI | CTAG | 3 cut(s) | 195, 534, 569 |
| StyI | CCWWGG | 1 cut(s) | 452 |
| TaaI | ACNGT | 1 cut(s) | 52 |
| TaqI | TCGA | 2 cut(s) | 182, 395 |
| TasI | AATT | 4 cut(s) | 317, 336, 399, 459 |
| Tru1I | TTAA | 2 cut(s) | 584, 607 |
| Tru9I | TTAA | 2 cut(s) | 584, 607 |
| TscAI | CASTG | 2 cut(s) | 148, 597 |
| TseI | GCWGC | 2 cut(s) | 108, 560 |
| TspDTI | ATGAA | 3 cut(s) | 84, 141, 310 |
| TspGWI | ACGGA | 1 cut(s) | 358 |
| TspRI | CASTG | 2 cut(s) | 148, 597 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 143 |
| XapI | RAATTY | 1 cut(s) | 317 |
| XceI | RCATGY | 1 cut(s) | 414 |
| XspI | CTAG | 3 cut(s) | 195, 534, 569 |