isoform X1
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 520 |
| Acc65I | GGTACC | 1 cut(s) | 537 |
| AccB1I | GGYRCC | 2 cut(s) | 359, 537 |
| AccBSI | CCGCTC | 1 cut(s) | 115 |
| AciI | CCGC | 2 cut(s) | 115, 188 |
| AcoI | YGGCCR | 1 cut(s) | 15 |
| AcsI | RAATTY | 1 cut(s) | 404 |
| AfaI | GTAC | 2 cut(s) | 254, 539 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 585 |
| AgsI | TTSAA | 3 cut(s) | 49, 242, 453 |
| AjnI | CCWGG | 1 cut(s) | 578 |
| AluBI | AGCT | 1 cut(s) | 623 |
| AluI | AGCT | 1 cut(s) | 623 |
| Alw26I | GTCTC | 1 cut(s) | 14 |
| AoxI | GGCC | 2 cut(s) | 15, 521 |
| ApeKI | GCWGC | 1 cut(s) | 490 |
| ApoI | RAATTY | 1 cut(s) | 404 |
| ArsI | GACNNNNNNTTYG | 1 cut(s) | 27 |
| AseI | ATTAAT | 1 cut(s) | 177 |
| Asp718I | GGTACC | 1 cut(s) | 537 |
| AsuHPI | GGTGA | 1 cut(s) | 277 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 213, 246, 529, 562 |
| BanI | GGYRCC | 2 cut(s) | 359, 537 |
| BbsI | GAAGAC | 1 cut(s) | 47 |
| BbvI | GCAGC | 1 cut(s) | 502 |
| BciT130I | CCWGG | 1 cut(s) | 580 |
| BcoDI | GTCTC | 1 cut(s) | 14 |
| BfuAI | ACCTGC | 1 cut(s) | 520 |
| BglII | AGATCT | 1 cut(s) | 215 |
| BisI | GCNGC | 1 cut(s) | 491 |
| BlpI | GCTNAGC | 1 cut(s) | 111 |
| BlsI | GCNGC | 1 cut(s) | 492 |
| Bme1390I | CCNGG | 1 cut(s) | 580 |
| BmiI | GGNNCC | 2 cut(s) | 361, 539 |
| BmrFI | CCNGG | 1 cut(s) | 580 |
| BpiI | GAAGAC | 1 cut(s) | 47 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 111 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 585 |
| Bse3DI | GCAATG | 1 cut(s) | 485 |
| BseBI | CCWGG | 1 cut(s) | 580 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 585 |
| BseMI | GCAATG | 1 cut(s) | 485 |
| BseMII | CTCAG | 1 cut(s) | 102 |
| BseXI | GCAGC | 1 cut(s) | 502 |
| Bsh1285I | CGRYCG | 1 cut(s) | 476 |
| BshFI | GGCC | 2 cut(s) | 17, 523 |
| BshNI | GGYRCC | 2 cut(s) | 359, 537 |
| BsiEI | CGRYCG | 1 cut(s) | 476 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 585 |
| BsmAI | GTCTC | 1 cut(s) | 14 |
| BsnI | GGCC | 2 cut(s) | 17, 523 |
| Bsp143I | GATC | 5 cut(s) | 67, 215, 463, 473, 567 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 111 |
| BspACI | CCGC | 2 cut(s) | 115, 188 |
| BspANI | GGCC | 2 cut(s) | 17, 523 |
| BspCNI | CTCAG | 1 cut(s) | 103 |
| BspLI | GGNNCC | 2 cut(s) | 361, 539 |
| BspMI | ACCTGC | 1 cut(s) | 520 |
| BspT107I | GGYRCC | 2 cut(s) | 359, 537 |
| BsrBI | CCGCTC | 1 cut(s) | 115 |
| BsrDI | GCAATG | 1 cut(s) | 485 |
| BssMI | GATC | 5 cut(s) | 67, 215, 463, 473, 567 |
| Bst2UI | CCWGG | 1 cut(s) | 580 |
| Bst4CI | ACNGT | 1 cut(s) | 145 |
| Bst6I | CTCTTC | 1 cut(s) | 44 |
| BstDEI | CTNAG | 1 cut(s) | 111 |
| BstKTI | GATC | 5 cut(s) | 70, 218, 466, 476, 570 |
| BstMAI | GTCTC | 1 cut(s) | 14 |
| BstMBI | GATC | 5 cut(s) | 67, 215, 463, 473, 567 |
| BstMCI | CGRYCG | 1 cut(s) | 476 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 202, 341 |
| BstNI | CCWGG | 1 cut(s) | 580 |
| BstNSI | RCATGY | 1 cut(s) | 335 |
| BstSCI | CCNGG | 1 cut(s) | 578 |
| BstV1I | GCAGC | 1 cut(s) | 502 |
| BstV2I | GAAGAC | 1 cut(s) | 47 |
| BstX2I | RGATCY | 1 cut(s) | 215 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 13, 97 |
| BstYI | RGATCY | 1 cut(s) | 215 |
| BsuRI | GGCC | 2 cut(s) | 17, 523 |
| BtsIMutI | CAGTG | 1 cut(s) | 141 |
| BveI | ACCTGC | 1 cut(s) | 520 |
| Csp6I | GTAC | 2 cut(s) | 253, 538 |
| CviAII | CATG | 4 cut(s) | 160, 314, 332, 356 |
| CviJI | RGCY | 5 cut(s) | 17, 384, 493, 523, 623 |
| CviKI_1 | RGCY | 5 cut(s) | 17, 384, 493, 523, 623 |
| CviQI | GTAC | 2 cut(s) | 253, 538 |
| DdeI | CTNAG | 1 cut(s) | 111 |
| DpnI | GATC | 5 cut(s) | 69, 217, 465, 475, 569 |
| DpnII | GATC | 5 cut(s) | 67, 215, 463, 473, 567 |
| EaeI | YGGCCR | 1 cut(s) | 15 |
| Eam1104I | CTCTTC | 1 cut(s) | 44 |
| EarI | CTCTTC | 1 cut(s) | 44 |
| EcoRII | CCWGG | 1 cut(s) | 578 |
| FaeI | CATG | 4 cut(s) | 163, 317, 335, 359 |
| FatI | CATG | 4 cut(s) | 159, 313, 331, 355 |
| FauNDI | CATATG | 1 cut(s) | 226 |
| Fnu4HI | GCNGC | 1 cut(s) | 491 |
| Fsp4HI | GCNGC | 1 cut(s) | 491 |
| GluI | GCNGC | 1 cut(s) | 491 |
| HaeIII | GGCC | 2 cut(s) | 17, 523 |
| Hin1II | CATG | 4 cut(s) | 163, 317, 335, 359 |
| HinfI | GANTC | 1 cut(s) | 52 |
| HphI | GGTGA | 1 cut(s) | 277 |
| Hpy166II | GTNNAC | 2 cut(s) | 268, 329 |
| Hpy188I | TCNGA | 3 cut(s) | 72, 220, 410 |
| Hpy8I | GTNNAC | 2 cut(s) | 268, 329 |
| Hpy99I | CGWCG | 1 cut(s) | 599 |
| HpyAV | CCTTC | 5 cut(s) | 71, 116, 453, 513, 528 |
| HpyCH4III | ACNGT | 1 cut(s) | 145 |
| HpyCH4V | TGCA | 2 cut(s) | 344, 490 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 202, 341 |
| HpyF3I | CTNAG | 1 cut(s) | 111 |
| Hsp92II | CATG | 4 cut(s) | 163, 317, 335, 359 |
| KpnI | GGTACC | 1 cut(s) | 541 |
| Kzo9I | GATC | 5 cut(s) | 67, 215, 463, 473, 567 |
| LmnI | GCTCC | 1 cut(s) | 628 |
| LpnPI | CCDG | 6 cut(s) | 241, 471, 501, 525, 565, 592 |
| Lsp1109I | GCAGC | 1 cut(s) | 502 |
| MaeIII | GTNAC | 1 cut(s) | 139 |
| MalI | GATC | 5 cut(s) | 69, 217, 465, 475, 569 |
| MbiI | CCGCTC | 1 cut(s) | 115 |
| MboI | GATC | 5 cut(s) | 67, 215, 463, 473, 567 |
| MboII | GAAGA | 2 cut(s) | 47, 61 |
| MfeI | CAATTG | 1 cut(s) | 31 |
| MflI | RGATCY | 1 cut(s) | 215 |
| MluCI | AATT | 6 cut(s) | 10, 31, 105, 170, 345, 404 |
| MlyI | GAGTC | 1 cut(s) | 61 |
| MnlI | CCTC | 4 cut(s) | 271, 373, 504, 547 |
| MseI | TTAA | 3 cut(s) | 27, 177, 432 |
| MslI | CAYNNNNRTG | 1 cut(s) | 452 |
| MspR9I | CCNGG | 1 cut(s) | 580 |
| MunI | CAATTG | 1 cut(s) | 31 |
| MvaI | CCWGG | 1 cut(s) | 580 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 202, 341 |
| NdeI | CATATG | 1 cut(s) | 226 |
| NdeII | GATC | 5 cut(s) | 67, 215, 463, 473, 567 |
| NlaIII | CATG | 4 cut(s) | 163, 317, 335, 359 |
| NlaIV | GGNNCC | 2 cut(s) | 361, 539 |
| NmeAIII | GCCGAG | 1 cut(s) | 43 |
| NmuCI | GTSAC | 1 cut(s) | 139 |
| NspI | RCATGY | 1 cut(s) | 335 |
| PkrI | GCNGC | 1 cut(s) | 492 |
| Ple19I | CGATCG | 1 cut(s) | 476 |
| PleI | GAGTC | 1 cut(s) | 60 |
| PpsI | GAGTC | 1 cut(s) | 60 |
| PshBI | ATTAAT | 1 cut(s) | 177 |
| Psp6I | CCWGG | 1 cut(s) | 578 |
| PspGI | CCWGG | 1 cut(s) | 578 |
| PspN4I | GGNNCC | 2 cut(s) | 361, 539 |
| PsuI | RGATCY | 1 cut(s) | 215 |
| PvuI | CGATCG | 1 cut(s) | 476 |
| RsaI | GTAC | 2 cut(s) | 254, 539 |
| RsaNI | GTAC | 2 cut(s) | 253, 538 |
| RseI | CAYNNNNRTG | 1 cut(s) | 452 |
| SaqAI | TTAA | 3 cut(s) | 27, 177, 432 |
| SatI | GCNGC | 1 cut(s) | 491 |
| Sau3AI | GATC | 5 cut(s) | 67, 215, 463, 473, 567 |
| SchI | GAGTC | 1 cut(s) | 61 |
| ScrFI | CCNGG | 1 cut(s) | 580 |
| SetI | ASST | 8 cut(s) | 82, 399, 419, 514, 539, 558, 584, 625 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 452 |
| Sse9I | AATT | 6 cut(s) | 10, 31, 105, 170, 345, 404 |
| SsiI | CCGC | 2 cut(s) | 115, 188 |
| StyD4I | CCNGG | 1 cut(s) | 578 |
| TaaI | ACNGT | 1 cut(s) | 145 |
| TaqI | TCGA | 1 cut(s) | 472 |
| TasI | AATT | 6 cut(s) | 10, 31, 105, 170, 345, 404 |
| TatI | WGTACW | 1 cut(s) | 252 |
| Tru1I | TTAA | 3 cut(s) | 27, 177, 432 |
| Tru9I | TTAA | 3 cut(s) | 27, 177, 432 |
| TscAI | CASTG | 1 cut(s) | 148 |
| TseFI | GTSAC | 1 cut(s) | 139 |
| TseI | GCWGC | 1 cut(s) | 490 |
| Tsp45I | GTSAC | 1 cut(s) | 139 |
| TspDTI | ATGAA | 2 cut(s) | 90, 249 |
| TspRI | CASTG | 1 cut(s) | 148 |
| VspI | ATTAAT | 1 cut(s) | 177 |
| XapI | RAATTY | 1 cut(s) | 404 |
| XceI | RCATGY | 1 cut(s) | 335 |