isoform X1
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 2 cut(s) | 143, 192 |
| AccI | GTMKAC | 2 cut(s) | 92, 291 |
| AciI | CCGC | 3 cut(s) | 121, 335, 688 |
| AclI | AACGTT | 1 cut(s) | 361 |
| AfaI | GTAC | 1 cut(s) | 545 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 672 |
| AgsI | TTSAA | 7 cut(s) | 42, 115, 403, 447, 565, 694, 713 |
| AjnI | CCWGG | 1 cut(s) | 451 |
| AluBI | AGCT | 6 cut(s) | 137, 213, 509, 573, 721, 771 |
| AluI | AGCT | 6 cut(s) | 137, 213, 509, 573, 721, 771 |
| Ama87I | CYCGRG | 1 cut(s) | 668 |
| AoxI | GGCC | 2 cut(s) | 662, 674 |
| ApeKI | GCWGC | 5 cut(s) | 134, 213, 497, 509, 771 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 689 |
| AspA2I | CCTAGG | 1 cut(s) | 677 |
| AspS9I | GGNCC | 2 cut(s) | 366, 663 |
| AsuC2I | CCSGG | 2 cut(s) | 669, 670 |
| AsuHPI | GGTGA | 1 cut(s) | 694 |
| AvaI | CYCGRG | 1 cut(s) | 668 |
| AvaII | GGWCC | 1 cut(s) | 366 |
| AvrII | CCTAGG | 1 cut(s) | 677 |
| BaeGI | GKGCMC | 1 cut(s) | 755 |
| BanI | GGYRCC | 2 cut(s) | 143, 192 |
| BbsI | GAAGAC | 1 cut(s) | 606 |
| BbvI | GCAGC | 5 cut(s) | 146, 200, 484, 496, 758 |
| BccI | CCATC | 3 cut(s) | 325, 406, 597 |
| BceAI | ACGGC | 1 cut(s) | 180 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 479, 513 |
| BciT130I | CCWGG | 1 cut(s) | 453 |
| BcnI | CCSGG | 2 cut(s) | 669, 670 |
| BfaI | CTAG | 2 cut(s) | 210, 678 |
| BfmI | CTRYAG | 1 cut(s) | 574 |
| BisI | GCNGC | 5 cut(s) | 135, 214, 498, 510, 772 |
| BlnI | CCTAGG | 1 cut(s) | 677 |
| BlsI | GCNGC | 5 cut(s) | 136, 215, 499, 511, 773 |
| BmcAI | AGTACT | 1 cut(s) | 545 |
| Bme1390I | CCNGG | 3 cut(s) | 453, 669, 670 |
| Bme18I | GGWCC | 1 cut(s) | 366 |
| BmeT110I | CYCGRG | 1 cut(s) | 668 |
| BmgT120I | GGNCC | 2 cut(s) | 366, 663 |
| BmiI | GGNNCC | 3 cut(s) | 145, 194, 665 |
| BmrFI | CCNGG | 3 cut(s) | 453, 669, 670 |
| BmsI | GCATC | 1 cut(s) | 273 |
| BpiI | GAAGAC | 1 cut(s) | 606 |
| BpmI | CTGGAG | 3 cut(s) | 159, 474, 723 |
| BpuMI | CCSGG | 2 cut(s) | 669, 670 |
| BsaJI | CCNNGG | 4 cut(s) | 618, 667, 668, 677 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 383, 413 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 672 |
| Bse1I | ACTGG | 2 cut(s) | 15, 287 |
| BseBI | CCWGG | 1 cut(s) | 453 |
| BseDI | CCNNGG | 4 cut(s) | 618, 667, 668, 677 |
| BseGI | GGATG | 1 cut(s) | 589 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 672 |
| BseNI | ACTGG | 2 cut(s) | 15, 287 |
| BseSI | GKGCMC | 1 cut(s) | 755 |
| BseXI | GCAGC | 5 cut(s) | 146, 200, 484, 496, 758 |
| BsgI | GTGCAG | 2 cut(s) | 428, 757 |
| BshFI | GGCC | 2 cut(s) | 664, 676 |
| BshNI | GGYRCC | 2 cut(s) | 143, 192 |
| BsiHKCI | CYCGRG | 1 cut(s) | 668 |
| BsiSI | CCGG | 1 cut(s) | 669 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 672 |
| BsnI | GGCC | 2 cut(s) | 664, 676 |
| BsoBI | CYCGRG | 1 cut(s) | 668 |
| Bsp1286I | GDGCHC | 1 cut(s) | 755 |
| Bsp143I | GATC | 1 cut(s) | 465 |
| BspACI | CCGC | 3 cut(s) | 121, 335, 688 |
| BspANI | GGCC | 2 cut(s) | 664, 676 |
| BspLI | GGNNCC | 3 cut(s) | 145, 194, 665 |
| BspQI | GCTCTTC | 1 cut(s) | 563 |
| BspT107I | GGYRCC | 2 cut(s) | 143, 192 |
| BsrI | ACTGG | 2 cut(s) | 15, 287 |
| BssECI | CCNNGG | 4 cut(s) | 618, 667, 668, 677 |
| BssMI | GATC | 1 cut(s) | 465 |
| BssT1I | CCWWGG | 1 cut(s) | 677 |
| Bst2UI | CCWGG | 1 cut(s) | 453 |
| Bst4CI | ACNGT | 2 cut(s) | 296, 578 |
| Bst6I | CTCTTC | 2 cut(s) | 563, 653 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 11 |
| BstDEI | CTNAG | 1 cut(s) | 128 |
| BstF5I | GGATG | 1 cut(s) | 589 |
| BstKTI | GATC | 1 cut(s) | 468 |
| BstMBI | GATC | 1 cut(s) | 465 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 11, 143, 283, 506 |
| BstNI | CCWGG | 1 cut(s) | 453 |
| BstSCI | CCNGG | 3 cut(s) | 451, 667, 668 |
| BstSFI | CTRYAG | 1 cut(s) | 574 |
| BstSLI | GKGCMC | 1 cut(s) | 755 |
| BstV1I | GCAGC | 5 cut(s) | 146, 200, 484, 496, 758 |
| BstV2I | GAAGAC | 1 cut(s) | 606 |
| BsuRI | GGCC | 2 cut(s) | 664, 676 |
| BtsCI | GGATG | 1 cut(s) | 589 |
| BtsIMutI | CAGTG | 2 cut(s) | 439, 774 |
| Cfr13I | GGNCC | 2 cut(s) | 366, 663 |
| Cfr9I | CCCGGG | 1 cut(s) | 668 |
| Csp6I | GTAC | 1 cut(s) | 544 |
| CviAII | CATG | 1 cut(s) | 551 |
| CviQI | GTAC | 1 cut(s) | 544 |
| DdeI | CTNAG | 1 cut(s) | 128 |
| DpnI | GATC | 1 cut(s) | 467 |
| DpnII | GATC | 1 cut(s) | 465 |
| Eam1104I | CTCTTC | 2 cut(s) | 563, 653 |
| EarI | CTCTTC | 2 cut(s) | 563, 653 |
| Eco130I | CCWWGG | 1 cut(s) | 677 |
| Eco147I | AGGCCT | 1 cut(s) | 676 |
| Eco47I | GGWCC | 1 cut(s) | 366 |
| Eco88I | CYCGRG | 1 cut(s) | 668 |
| EcoO109I | RGGNCCY | 1 cut(s) | 663 |
| EcoRII | CCWGG | 1 cut(s) | 451 |
| EcoT14I | CCWWGG | 1 cut(s) | 677 |
| ErhI | CCWWGG | 1 cut(s) | 677 |
| FaeI | CATG | 1 cut(s) | 554 |
| FatI | CATG | 1 cut(s) | 550 |
| FauI | CCCGC | 1 cut(s) | 328 |
| FblI | GTMKAC | 2 cut(s) | 92, 291 |
| Fnu4HI | GCNGC | 5 cut(s) | 135, 214, 498, 510, 772 |
| FokI | GGATG | 1 cut(s) | 576 |
| Fsp4HI | GCNGC | 5 cut(s) | 135, 214, 498, 510, 772 |
| FspBI | CTAG | 2 cut(s) | 210, 678 |
| GluI | GCNGC | 5 cut(s) | 135, 214, 498, 510, 772 |
| GsuI | CTGGAG | 3 cut(s) | 159, 474, 723 |
| HaeIII | GGCC | 2 cut(s) | 664, 676 |
| HapII | CCGG | 1 cut(s) | 669 |
| Hin1II | CATG | 1 cut(s) | 554 |
| HinfI | GANTC | 3 cut(s) | 248, 623, 724 |
| HpaII | CCGG | 1 cut(s) | 669 |
| HphI | GGTGA | 1 cut(s) | 694 |
| Hpy166II | GTNNAC | 2 cut(s) | 93, 292 |
| Hpy188I | TCNGA | 5 cut(s) | 172, 517, 594, 622, 634 |
| Hpy188III | TCNNGA | 2 cut(s) | 488, 565 |
| Hpy8I | GTNNAC | 2 cut(s) | 93, 292 |
| Hpy99I | CGWCG | 1 cut(s) | 429 |
| HpyAV | CCTTC | 2 cut(s) | 94, 397 |
| HpyCH4III | ACNGT | 2 cut(s) | 296, 578 |
| HpyCH4IV | ACGT | 1 cut(s) | 361 |
| HpyCH4V | TGCA | 5 cut(s) | 200, 269, 409, 500, 774 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 11, 143, 283, 506 |
| HpyF3I | CTNAG | 1 cut(s) | 128 |
| HpySE526I | ACGT | 1 cut(s) | 361 |
| Hsp92II | CATG | 1 cut(s) | 554 |
| Kzo9I | GATC | 1 cut(s) | 465 |
| LguI | GCTCTTC | 1 cut(s) | 563 |
| LpnPI | CCDG | 9 cut(s) | 28, 123, 192, 300, 320, 438, 465, 682, 687 |
| Lsp1109I | GCAGC | 5 cut(s) | 146, 200, 484, 496, 758 |
| LweI | GCATC | 1 cut(s) | 273 |
| MaeI | CTAG | 2 cut(s) | 210, 678 |
| MaeII | ACGT | 1 cut(s) | 361 |
| MalI | GATC | 1 cut(s) | 467 |
| MboI | GATC | 1 cut(s) | 465 |
| MboII | GAAGA | 5 cut(s) | 65, 362, 580, 606, 670 |
| MfeI | CAATTG | 2 cut(s) | 270, 469 |
| MhlI | GDGCHC | 1 cut(s) | 755 |
| MluCI | AATT | 8 cut(s) | 37, 115, 173, 187, 225, 270, 315, 469 |
| MmeI | TCCRAC | 1 cut(s) | 344 |
| MroXI | GAANNNNTTC | 1 cut(s) | 689 |
| MseI | TTAA | 3 cut(s) | 75, 255, 318 |
| MspA1I | CMGCKG | 1 cut(s) | 137 |
| MspI | CCGG | 1 cut(s) | 669 |
| MspR9I | CCNGG | 3 cut(s) | 453, 669, 670 |
| MunI | CAATTG | 2 cut(s) | 270, 469 |
| MvaI | CCWGG | 1 cut(s) | 453 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 11, 143, 283, 506 |
| NciI | CCSGG | 2 cut(s) | 669, 670 |
| NdeII | GATC | 1 cut(s) | 465 |
| NlaIII | CATG | 1 cut(s) | 554 |
| NlaIV | GGNNCC | 3 cut(s) | 145, 194, 665 |
| PceI | AGGCCT | 1 cut(s) | 676 |
| PciSI | GCTCTTC | 1 cut(s) | 563 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 733 |
| PdmI | GAANNNNTTC | 1 cut(s) | 689 |
| PfeI | GAWTC | 3 cut(s) | 248, 623, 724 |
| PfoI | TCCNGGA | 1 cut(s) | 451 |
| PkrI | GCNGC | 5 cut(s) | 136, 215, 499, 511, 773 |
| Psp1406I | AACGTT | 1 cut(s) | 361 |
| Psp6I | CCWGG | 1 cut(s) | 451 |
| PspGI | CCWGG | 1 cut(s) | 451 |
| PspN4I | GGNNCC | 3 cut(s) | 145, 194, 665 |
| PspPI | GGNCC | 2 cut(s) | 366, 663 |
| PvuII | CAGCTG | 1 cut(s) | 137 |
| RsaI | GTAC | 1 cut(s) | 545 |
| RsaNI | GTAC | 1 cut(s) | 544 |
| SapI | GCTCTTC | 1 cut(s) | 563 |
| SaqAI | TTAA | 3 cut(s) | 75, 255, 318 |
| SatI | GCNGC | 5 cut(s) | 135, 214, 498, 510, 772 |
| Sau3AI | GATC | 1 cut(s) | 465 |
| Sau96I | GGNCC | 2 cut(s) | 366, 663 |
| ScaI | AGTACT | 1 cut(s) | 545 |
| ScrFI | CCNGG | 3 cut(s) | 453, 669, 670 |
| SduI | GDGCHC | 1 cut(s) | 755 |
| SfaNI | GCATC | 1 cut(s) | 273 |
| SfcI | CTRYAG | 1 cut(s) | 574 |
| SinI | GGWCC | 1 cut(s) | 366 |
| SmaI | CCCGGG | 1 cut(s) | 670 |
| Sse9I | AATT | 8 cut(s) | 37, 115, 173, 187, 225, 270, 315, 469 |
| SseBI | AGGCCT | 1 cut(s) | 676 |
| SsiI | CCGC | 3 cut(s) | 121, 335, 688 |
| SspMI | CTAG | 2 cut(s) | 210, 678 |
| StuI | AGGCCT | 1 cut(s) | 676 |
| StyD4I | CCNGG | 3 cut(s) | 451, 667, 668 |
| StyI | CCWWGG | 1 cut(s) | 677 |
| TaaI | ACNGT | 2 cut(s) | 296, 578 |
| TaiI | ACGT | 1 cut(s) | 364 |
| TasI | AATT | 8 cut(s) | 37, 115, 173, 187, 225, 270, 315, 469 |
| TatI | WGTACW | 1 cut(s) | 543 |
| TfiI | GAWTC | 3 cut(s) | 248, 623, 724 |
| Tru1I | TTAA | 3 cut(s) | 75, 255, 318 |
| Tru9I | TTAA | 3 cut(s) | 75, 255, 318 |
| TscAI | CASTG | 2 cut(s) | 439, 781 |
| TseI | GCWGC | 5 cut(s) | 134, 213, 497, 509, 771 |
| TspDTI | ATGAA | 1 cut(s) | 539 |
| TspMI | CCCGGG | 1 cut(s) | 668 |
| TspRI | CASTG | 2 cut(s) | 439, 781 |
| VpaK11BI | GGWCC | 1 cut(s) | 366 |
| XmaI | CCCGGG | 1 cut(s) | 668 |
| XmaJI | CCTAGG | 1 cut(s) | 677 |
| XmiI | GTMKAC | 2 cut(s) | 92, 291 |
| XmnI | GAANNNNTTC | 1 cut(s) | 689 |
| XspI | CTAG | 2 cut(s) | 210, 678 |
| ZrmI | AGTACT | 1 cut(s) | 545 |