isoform X1
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcoI | YGGCCR | 1 cut(s) | 583 |
| AfaI | GTAC | 1 cut(s) | 625 |
| AgsI | TTSAA | 6 cut(s) | 92, 196, 217, 356, 501, 544 |
| AjnI | CCWGG | 2 cut(s) | 154, 518 |
| AluBI | AGCT | 4 cut(s) | 75, 139, 359, 571 |
| AluI | AGCT | 4 cut(s) | 75, 139, 359, 571 |
| Alw21I | GWGCWC | 2 cut(s) | 29, 299 |
| Alw44I | GTGCAC | 1 cut(s) | 25 |
| AoxI | GGCC | 3 cut(s) | 512, 524, 583 |
| ApaLI | GTGCAC | 1 cut(s) | 25 |
| ApeKI | GCWGC | 2 cut(s) | 347, 359 |
| AseI | ATTAAT | 1 cut(s) | 60 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 289 |
| AspA2I | CCTAGG | 1 cut(s) | 527 |
| AspLEI | GCGC | 1 cut(s) | 164 |
| AspS9I | GGNCC | 1 cut(s) | 277 |
| AvaII | GGWCC | 1 cut(s) | 277 |
| AvrII | CCTAGG | 1 cut(s) | 527 |
| BaeGI | GKGCMC | 1 cut(s) | 29 |
| BbsI | GAAGAC | 1 cut(s) | 623 |
| Bbv12I | GWGCWC | 2 cut(s) | 29, 299 |
| BbvI | GCAGC | 2 cut(s) | 334, 346 |
| BceAI | ACGGC | 1 cut(s) | 195 |
| BciT130I | CCWGG | 2 cut(s) | 156, 520 |
| BfaI | CTAG | 2 cut(s) | 528, 549 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 591 |
| BisI | GCNGC | 2 cut(s) | 348, 360 |
| BlnI | CCTAGG | 1 cut(s) | 527 |
| BlsI | GCNGC | 2 cut(s) | 349, 361 |
| Bme1390I | CCNGG | 2 cut(s) | 156, 520 |
| Bme18I | GGWCC | 1 cut(s) | 277 |
| BmgT120I | GGNCC | 1 cut(s) | 277 |
| BmrFI | CCNGG | 2 cut(s) | 156, 520 |
| BmsI | GCATC | 2 cut(s) | 149, 189 |
| BpiI | GAAGAC | 1 cut(s) | 623 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 64, 96 |
| BpuEI | CTTGAG | 1 cut(s) | 518 |
| BsaJI | CCNNGG | 5 cut(s) | 12, 280, 337, 518, 527 |
| Bse3DI | GCAATG | 1 cut(s) | 187 |
| BseBI | CCWGG | 2 cut(s) | 156, 520 |
| BseDI | CCNNGG | 5 cut(s) | 12, 280, 337, 518, 527 |
| BseGI | GGATG | 3 cut(s) | 10, 164, 376 |
| BseMI | GCAATG | 1 cut(s) | 187 |
| BseRI | GAGGAG | 1 cut(s) | 567 |
| BseSI | GKGCMC | 1 cut(s) | 29 |
| BseXI | GCAGC | 2 cut(s) | 334, 346 |
| BshFI | GGCC | 3 cut(s) | 514, 526, 585 |
| BsiHKAI | GWGCWC | 2 cut(s) | 29, 299 |
| BslFI | GGGAC | 1 cut(s) | 615 |
| BsmFI | GGGAC | 1 cut(s) | 615 |
| BsnI | GGCC | 3 cut(s) | 514, 526, 585 |
| Bsp1286I | GDGCHC | 2 cut(s) | 29, 299 |
| Bsp143I | GATC | 1 cut(s) | 254 |
| BspANI | GGCC | 3 cut(s) | 514, 526, 585 |
| BsrDI | GCAATG | 1 cut(s) | 187 |
| BssECI | CCNNGG | 5 cut(s) | 12, 280, 337, 518, 527 |
| BssMI | GATC | 1 cut(s) | 254 |
| BssT1I | CCWWGG | 3 cut(s) | 12, 280, 527 |
| Bst2UI | CCWGG | 2 cut(s) | 156, 520 |
| Bst4CI | ACNGT | 1 cut(s) | 341 |
| BstDSI | CCRYGG | 1 cut(s) | 337 |
| BstF5I | GGATG | 3 cut(s) | 10, 164, 376 |
| BstHHI | GCGC | 1 cut(s) | 164 |
| BstKTI | GATC | 1 cut(s) | 257 |
| BstMBI | GATC | 1 cut(s) | 254 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 14, 356, 591 |
| BstNI | CCWGG | 2 cut(s) | 156, 520 |
| BstSCI | CCNGG | 2 cut(s) | 154, 518 |
| BstSLI | GKGCMC | 1 cut(s) | 29 |
| BstV1I | GCAGC | 2 cut(s) | 334, 346 |
| BstV2I | GAAGAC | 1 cut(s) | 623 |
| BsuRI | GGCC | 3 cut(s) | 514, 526, 585 |
| BtgI | CCRYGG | 1 cut(s) | 337 |
| BtsCI | GGATG | 3 cut(s) | 10, 164, 376 |
| CfoI | GCGC | 1 cut(s) | 164 |
| Cfr13I | GGNCC | 1 cut(s) | 277 |
| Csp6I | GTAC | 1 cut(s) | 624 |
| CviAII | CATG | 2 cut(s) | 49, 300 |
| CviQI | GTAC | 1 cut(s) | 624 |
| DpnI | GATC | 1 cut(s) | 256 |
| DpnII | GATC | 1 cut(s) | 254 |
| EaeI | YGGCCR | 1 cut(s) | 583 |
| Eco130I | CCWWGG | 3 cut(s) | 12, 280, 527 |
| Eco147I | AGGCCT | 2 cut(s) | 514, 526 |
| Eco47I | GGWCC | 1 cut(s) | 277 |
| EcoRII | CCWGG | 2 cut(s) | 154, 518 |
| EcoT14I | CCWWGG | 3 cut(s) | 12, 280, 527 |
| ErhI | CCWWGG | 3 cut(s) | 12, 280, 527 |
| FaeI | CATG | 2 cut(s) | 52, 303 |
| FaqI | GGGAC | 1 cut(s) | 615 |
| FatI | CATG | 2 cut(s) | 48, 299 |
| Fnu4HI | GCNGC | 2 cut(s) | 348, 360 |
| FokI | GGATG | 3 cut(s) | 17, 171, 383 |
| Fsp4HI | GCNGC | 2 cut(s) | 348, 360 |
| FspBI | CTAG | 2 cut(s) | 528, 549 |
| GlaI | GCGC | 1 cut(s) | 163 |
| GluI | GCNGC | 2 cut(s) | 348, 360 |
| HaeIII | GGCC | 3 cut(s) | 514, 526, 585 |
| HhaI | GCGC | 1 cut(s) | 164 |
| Hin1II | CATG | 2 cut(s) | 52, 303 |
| Hin6I | GCGC | 1 cut(s) | 162 |
| HinP1I | GCGC | 1 cut(s) | 162 |
| HinfI | GANTC | 1 cut(s) | 470 |
| Hpy166II | GTNNAC | 3 cut(s) | 27, 104, 277 |
| Hpy188I | TCNGA | 1 cut(s) | 469 |
| Hpy188III | TCNNGA | 4 cut(s) | 36, 196, 535, 549 |
| Hpy8I | GTNNAC | 3 cut(s) | 27, 104, 277 |
| HpyAV | CCTTC | 2 cut(s) | 300, 507 |
| HpyCH4III | ACNGT | 1 cut(s) | 341 |
| HpyCH4V | TGCA | 7 cut(s) | 27, 122, 223, 303, 350, 476, 506 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 14, 356, 591 |
| Hsp92II | CATG | 2 cut(s) | 52, 303 |
| HspAI | GCGC | 1 cut(s) | 162 |
| Kzo9I | GATC | 1 cut(s) | 254 |
| LpnPI | CCDG | 6 cut(s) | 21, 141, 168, 505, 532, 634 |
| Lsp1109I | GCAGC | 2 cut(s) | 334, 346 |
| LweI | GCATC | 2 cut(s) | 149, 189 |
| MaeI | CTAG | 2 cut(s) | 528, 549 |
| MalI | GATC | 1 cut(s) | 256 |
| MboI | GATC | 1 cut(s) | 254 |
| MboII | GAAGA | 3 cut(s) | 167, 456, 628 |
| MhlI | GDGCHC | 2 cut(s) | 29, 299 |
| MluCI | AATT | 3 cut(s) | 351, 432, 596 |
| MnlI | CCTC | 7 cut(s) | 241, 373, 504, 516, 525, 531, 545 |
| MroXI | GAANNNNTTC | 1 cut(s) | 289 |
| MseI | TTAA | 3 cut(s) | 21, 60, 318 |
| MslI | CAYNNNNRTG | 2 cut(s) | 237, 399 |
| MspR9I | CCNGG | 2 cut(s) | 156, 520 |
| MvaI | CCWGG | 2 cut(s) | 156, 520 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 14, 356, 591 |
| NdeII | GATC | 1 cut(s) | 254 |
| NlaIII | CATG | 2 cut(s) | 52, 303 |
| PceI | AGGCCT | 2 cut(s) | 514, 526 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 583 |
| PdmI | GAANNNNTTC | 1 cut(s) | 289 |
| PfeI | GAWTC | 1 cut(s) | 470 |
| PfoI | TCCNGGA | 1 cut(s) | 154 |
| PkrI | GCNGC | 2 cut(s) | 349, 361 |
| PshBI | ATTAAT | 1 cut(s) | 60 |
| Psp6I | CCWGG | 2 cut(s) | 154, 518 |
| PspGI | CCWGG | 2 cut(s) | 154, 518 |
| PspPI | GGNCC | 1 cut(s) | 277 |
| RsaI | GTAC | 1 cut(s) | 625 |
| RsaNI | GTAC | 1 cut(s) | 624 |
| RseI | CAYNNNNRTG | 2 cut(s) | 237, 399 |
| SaqAI | TTAA | 3 cut(s) | 21, 60, 318 |
| SatI | GCNGC | 2 cut(s) | 348, 360 |
| Sau3AI | GATC | 1 cut(s) | 254 |
| Sau96I | GGNCC | 1 cut(s) | 277 |
| ScrFI | CCNGG | 2 cut(s) | 156, 520 |
| SduI | GDGCHC | 2 cut(s) | 29, 299 |
| SetI | ASST | 9 cut(s) | 77, 141, 252, 282, 361, 542, 573, 623, 634 |
| SfaNI | GCATC | 2 cut(s) | 149, 189 |
| SinI | GGWCC | 1 cut(s) | 277 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 237, 399 |
| SmlI | CTYRAG | 1 cut(s) | 533 |
| SmoI | CTYRAG | 1 cut(s) | 533 |
| Sse9I | AATT | 3 cut(s) | 351, 432, 596 |
| SseBI | AGGCCT | 2 cut(s) | 514, 526 |
| SspMI | CTAG | 2 cut(s) | 528, 549 |
| StuI | AGGCCT | 2 cut(s) | 514, 526 |
| StyD4I | CCNGG | 2 cut(s) | 154, 518 |
| StyI | CCWWGG | 3 cut(s) | 12, 280, 527 |
| TaaI | ACNGT | 1 cut(s) | 341 |
| TasI | AATT | 3 cut(s) | 351, 432, 596 |
| TatI | WGTACW | 1 cut(s) | 623 |
| TfiI | GAWTC | 1 cut(s) | 470 |
| Tru1I | TTAA | 3 cut(s) | 21, 60, 318 |
| Tru9I | TTAA | 3 cut(s) | 21, 60, 318 |
| TseI | GCWGC | 2 cut(s) | 347, 359 |
| TspDTI | ATGAA | 3 cut(s) | 37, 131, 478 |
| VneI | GTGCAC | 1 cut(s) | 25 |
| VpaK11BI | GGWCC | 1 cut(s) | 277 |
| VspI | ATTAAT | 1 cut(s) | 60 |
| XbaI | TCTAGA | 1 cut(s) | 548 |
| XmaJI | CCTAGG | 1 cut(s) | 527 |
| XmnI | GAANNNNTTC | 1 cut(s) | 289 |
| XspI | CTAG | 2 cut(s) | 528, 549 |