isoform X1
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Snf7 | PF03357 | 13 - 206 | 3.3e-47 | Snf7 |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 691 |
| Acc65I | GGTACC | 1 cut(s) | 550 |
| AccB1I | GGYRCC | 2 cut(s) | 17, 550 |
| AclWI | GGATC | 1 cut(s) | 642 |
| AcoI | YGGCCR | 1 cut(s) | 655 |
| AcsI | RAATTY | 1 cut(s) | 432 |
| AcuI | CTGAAG | 2 cut(s) | 270, 594 |
| AdeI | CACNNNGTG | 1 cut(s) | 707 |
| AfaI | GTAC | 1 cut(s) | 552 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 50, 66, 172, 664 |
| AgsI | TTSAA | 4 cut(s) | 122, 349, 377, 437 |
| AjnI | CCWGG | 2 cut(s) | 160, 657 |
| AluBI | AGCT | 6 cut(s) | 112, 179, 323, 456, 598, 641 |
| AluI | AGCT | 6 cut(s) | 112, 179, 323, 456, 598, 641 |
| Alw21I | GWGCWC | 1 cut(s) | 600 |
| Alw26I | GTCTC | 1 cut(s) | 434 |
| AlwI | GGATC | 1 cut(s) | 642 |
| Ama87I | CYCGRG | 1 cut(s) | 693 |
| AoxI | GGCC | 3 cut(s) | 158, 163, 655 |
| ApeKI | GCWGC | 2 cut(s) | 629, 632 |
| ApoI | RAATTY | 1 cut(s) | 432 |
| AseI | ATTAAT | 1 cut(s) | 72 |
| Asp718I | GGTACC | 1 cut(s) | 550 |
| AspS9I | GGNCC | 2 cut(s) | 164, 409 |
| AsuHPI | GGTGA | 1 cut(s) | 509 |
| AvaI | CYCGRG | 1 cut(s) | 693 |
| AvaII | GGWCC | 1 cut(s) | 409 |
| BalI | TGGCCA | 1 cut(s) | 657 |
| BanI | GGYRCC | 2 cut(s) | 17, 550 |
| BanII | GRGCYC | 1 cut(s) | 600 |
| BbsI | GAAGAC | 1 cut(s) | 158 |
| Bbv12I | GWGCWC | 1 cut(s) | 600 |
| BbvCI | CCTCAGC | 1 cut(s) | 663 |
| BbvI | GCAGC | 2 cut(s) | 641, 644 |
| BccI | CCATC | 4 cut(s) | 400, 409, 539, 562 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 257, 291 |
| BciT130I | CCWGG | 2 cut(s) | 162, 659 |
| BclI | TGATCA | 1 cut(s) | 571 |
| BcoDI | GTCTC | 1 cut(s) | 434 |
| BfaI | CTAG | 1 cut(s) | 512 |
| BfmI | CTRYAG | 1 cut(s) | 457 |
| BfuAI | ACCTGC | 1 cut(s) | 691 |
| BisI | GCNGC | 2 cut(s) | 630, 633 |
| BlpI | GCTNAGC | 1 cut(s) | 306 |
| BlsI | GCNGC | 2 cut(s) | 631, 634 |
| Bme1390I | CCNGG | 2 cut(s) | 162, 659 |
| Bme18I | GGWCC | 1 cut(s) | 409 |
| BmeT110I | CYCGRG | 1 cut(s) | 693 |
| BmgT120I | GGNCC | 2 cut(s) | 164, 409 |
| BmiI | GGNNCC | 2 cut(s) | 19, 552 |
| BmrFI | CCNGG | 2 cut(s) | 162, 659 |
| BmsI | GCATC | 3 cut(s) | 46, 292, 496 |
| BpiI | GAAGAC | 1 cut(s) | 158 |
| Bpu10I | CCTNAGC | 2 cut(s) | 171, 663 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 306 |
| BpuEI | CTTGAG | 1 cut(s) | 191 |
| BsaJI | CCNNGG | 1 cut(s) | 692 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 50, 66, 172, 664 |
| BseBI | CCWGG | 2 cut(s) | 162, 659 |
| BseDI | CCNNGG | 1 cut(s) | 692 |
| BseGI | GGATG | 4 cut(s) | 100, 424, 511, 554 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 50, 66, 172, 664 |
| BseMII | CTCAG | 4 cut(s) | 185, 320, 528, 654 |
| BseRI | GAGGAG | 2 cut(s) | 30, 497 |
| BseXI | GCAGC | 2 cut(s) | 641, 644 |
| BseYI | CCCAGC | 1 cut(s) | 637 |
| BshFI | GGCC | 3 cut(s) | 160, 165, 657 |
| BshNI | GGYRCC | 2 cut(s) | 17, 550 |
| BsiHKAI | GWGCWC | 1 cut(s) | 600 |
| BsiHKCI | CYCGRG | 1 cut(s) | 693 |
| BslFI | GGGAC | 1 cut(s) | 674 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 50, 66, 172, 664 |
| BsmAI | GTCTC | 1 cut(s) | 434 |
| BsmBI | CGTCTC | 1 cut(s) | 434 |
| BsmFI | GGGAC | 1 cut(s) | 674 |
| BsnI | GGCC | 3 cut(s) | 160, 165, 657 |
| BsoBI | CYCGRG | 1 cut(s) | 693 |
| Bsp1286I | GDGCHC | 1 cut(s) | 600 |
| Bsp143I | GATC | 5 cut(s) | 102, 144, 268, 571, 647 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 306 |
| BspANI | GGCC | 3 cut(s) | 160, 165, 657 |
| BspCNI | CTCAG | 4 cut(s) | 184, 319, 529, 655 |
| BspLI | GGNNCC | 2 cut(s) | 19, 552 |
| BspMI | ACCTGC | 1 cut(s) | 691 |
| BspPI | GGATC | 1 cut(s) | 642 |
| BspT107I | GGYRCC | 2 cut(s) | 17, 550 |
| BssECI | CCNNGG | 1 cut(s) | 692 |
| BssMI | GATC | 5 cut(s) | 102, 144, 268, 571, 647 |
| Bst2UI | CCWGG | 2 cut(s) | 162, 659 |
| Bst4CI | ACNGT | 2 cut(s) | 91, 367 |
| BstDEI | CTNAG | 4 cut(s) | 171, 306, 537, 663 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 64 |
| BstF5I | GGATG | 4 cut(s) | 100, 424, 511, 554 |
| BstKTI | GATC | 5 cut(s) | 105, 147, 271, 574, 650 |
| BstMAI | GTCTC | 1 cut(s) | 434 |
| BstMBI | GATC | 5 cut(s) | 102, 144, 268, 571, 647 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 176, 515, 604, 638 |
| BstNI | CCWGG | 2 cut(s) | 162, 659 |
| BstNSI | RCATGY | 2 cut(s) | 244, 629 |
| BstSCI | CCNGG | 2 cut(s) | 160, 657 |
| BstSFI | CTRYAG | 1 cut(s) | 457 |
| BstV1I | GCAGC | 2 cut(s) | 641, 644 |
| BstV2I | GAAGAC | 1 cut(s) | 158 |
| BstX2I | RGATCY | 1 cut(s) | 647 |
| BstYI | RGATCY | 1 cut(s) | 647 |
| BsuRI | GGCC | 3 cut(s) | 160, 165, 657 |
| BtsCI | GGATG | 4 cut(s) | 100, 424, 511, 554 |
| BtsIMutI | CAGTG | 1 cut(s) | 96 |
| BveI | ACCTGC | 1 cut(s) | 691 |
| Cfr13I | GGNCC | 2 cut(s) | 164, 409 |
| CseI | GACGC | 1 cut(s) | 451 |
| Csp6I | GTAC | 1 cut(s) | 551 |
| CviAII | CATG | 5 cut(s) | 196, 241, 523, 590, 626 |
| CviQI | GTAC | 1 cut(s) | 551 |
| DdeI | CTNAG | 4 cut(s) | 171, 306, 537, 663 |
| DpnI | GATC | 5 cut(s) | 104, 146, 270, 573, 649 |
| DpnII | GATC | 5 cut(s) | 102, 144, 268, 571, 647 |
| DraIII | CACNNNGTG | 1 cut(s) | 707 |
| EaeI | YGGCCR | 1 cut(s) | 655 |
| Ecl136II | GAGCTC | 1 cut(s) | 598 |
| Eco147I | AGGCCT | 1 cut(s) | 160 |
| Eco24I | GRGCYC | 1 cut(s) | 600 |
| Eco47I | GGWCC | 1 cut(s) | 409 |
| Eco53kI | GAGCTC | 1 cut(s) | 598 |
| Eco57I | CTGAAG | 2 cut(s) | 270, 594 |
| Eco88I | CYCGRG | 1 cut(s) | 693 |
| EcoICRI | GAGCTC | 1 cut(s) | 598 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 64 |
| EcoRII | CCWGG | 2 cut(s) | 160, 657 |
| EcoT38I | GRGCYC | 1 cut(s) | 600 |
| Esp3I | CGTCTC | 1 cut(s) | 434 |
| FaeI | CATG | 5 cut(s) | 199, 244, 526, 593, 629 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 429, 461 |
| FaqI | GGGAC | 1 cut(s) | 674 |
| FatI | CATG | 5 cut(s) | 195, 240, 522, 589, 625 |
| FbaI | TGATCA | 1 cut(s) | 571 |
| Fnu4HI | GCNGC | 2 cut(s) | 630, 633 |
| FokI | GGATG | 4 cut(s) | 107, 431, 518, 541 |
| FriOI | GRGCYC | 1 cut(s) | 600 |
| Fsp4HI | GCNGC | 2 cut(s) | 630, 633 |
| FspBI | CTAG | 1 cut(s) | 512 |
| GluI | GCNGC | 2 cut(s) | 630, 633 |
| GsaI | CCCAGC | 1 cut(s) | 641 |
| HaeIII | GGCC | 3 cut(s) | 160, 165, 657 |
| HgaI | GACGC | 1 cut(s) | 451 |
| Hin1II | CATG | 5 cut(s) | 199, 244, 526, 593, 629 |
| HindIII | AAGCTT | 1 cut(s) | 110 |
| HinfI | GANTC | 3 cut(s) | 373, 539, 578 |
| HphI | GGTGA | 1 cut(s) | 509 |
| Hpy166II | GTNNAC | 1 cut(s) | 680 |
| Hpy188I | TCNGA | 5 cut(s) | 64, 255, 289, 544, 583 |
| Hpy188III | TCNNGA | 9 cut(s) | 106, 148, 173, 189, 377, 437, 467, 512, 575 |
| Hpy8I | GTNNAC | 1 cut(s) | 680 |
| HpyAV | CCTTC | 3 cut(s) | 54, 221, 618 |
| HpyCH4III | ACNGT | 2 cut(s) | 91, 367 |
| HpyCH4IV | ACGT | 1 cut(s) | 235 |
| HpyCH4V | TGCA | 2 cut(s) | 394, 629 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 176, 515, 604, 638 |
| HpyF3I | CTNAG | 4 cut(s) | 171, 306, 537, 663 |
| HpySE526I | ACGT | 1 cut(s) | 235 |
| Hsp92II | CATG | 5 cut(s) | 199, 244, 526, 593, 629 |
| KpnI | GGTACC | 1 cut(s) | 554 |
| Ksp22I | TGATCA | 1 cut(s) | 571 |
| Kzo9I | GATC | 5 cut(s) | 102, 144, 268, 571, 647 |
| Lsp1109I | GCAGC | 2 cut(s) | 641, 644 |
| LweI | GCATC | 3 cut(s) | 46, 292, 496 |
| MaeI | CTAG | 1 cut(s) | 512 |
| MaeII | ACGT | 1 cut(s) | 235 |
| MaeIII | GTNAC | 1 cut(s) | 236 |
| MalI | GATC | 5 cut(s) | 104, 146, 270, 573, 649 |
| MboI | GATC | 5 cut(s) | 102, 144, 268, 571, 647 |
| MboII | GAAGA | 4 cut(s) | 16, 112, 163, 657 |
| MflI | RGATCY | 1 cut(s) | 647 |
| MhlI | GDGCHC | 1 cut(s) | 600 |
| MlsI | TGGCCA | 1 cut(s) | 657 |
| MluCI | AATT | 5 cut(s) | 344, 388, 432, 601, 671 |
| MluNI | TGGCCA | 1 cut(s) | 657 |
| MlyI | GAGTC | 1 cut(s) | 548 |
| MmeI | TCCRAC | 3 cut(s) | 31, 483, 589 |
| Mox20I | TGGCCA | 1 cut(s) | 657 |
| MscI | TGGCCA | 1 cut(s) | 657 |
| MseI | TTAA | 4 cut(s) | 72, 183, 261, 369 |
| MslI | CAYNNNNRTG | 1 cut(s) | 527 |
| Msp20I | TGGCCA | 1 cut(s) | 657 |
| MspA1I | CMGCKG | 1 cut(s) | 641 |
| MspR9I | CCNGG | 2 cut(s) | 162, 659 |
| MvaI | CCWGG | 2 cut(s) | 162, 659 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 176, 515, 604, 638 |
| NdeII | GATC | 5 cut(s) | 102, 144, 268, 571, 647 |
| NlaIII | CATG | 5 cut(s) | 199, 244, 526, 593, 629 |
| NlaIV | GGNNCC | 2 cut(s) | 19, 552 |
| NmuCI | GTSAC | 1 cut(s) | 236 |
| NspI | RCATGY | 2 cut(s) | 244, 629 |
| PceI | AGGCCT | 1 cut(s) | 160 |
| PfeI | GAWTC | 2 cut(s) | 373, 578 |
| PkrI | GCNGC | 2 cut(s) | 631, 634 |
| PleI | GAGTC | 1 cut(s) | 547 |
| PpsI | GAGTC | 1 cut(s) | 547 |
| PshBI | ATTAAT | 1 cut(s) | 72 |
| Psp124BI | GAGCTC | 1 cut(s) | 600 |
| Psp6I | CCWGG | 2 cut(s) | 160, 657 |
| PspFI | CCCAGC | 1 cut(s) | 637 |
| PspGI | CCWGG | 2 cut(s) | 160, 657 |
| PspN4I | GGNNCC | 2 cut(s) | 19, 552 |
| PspPI | GGNCC | 2 cut(s) | 164, 409 |
| PsuI | RGATCY | 1 cut(s) | 647 |
| PvuII | CAGCTG | 1 cut(s) | 641 |
| RsaI | GTAC | 1 cut(s) | 552 |
| RsaNI | GTAC | 1 cut(s) | 551 |
| RseI | CAYNNNNRTG | 1 cut(s) | 527 |
| SacI | GAGCTC | 1 cut(s) | 600 |
| SaqAI | TTAA | 4 cut(s) | 72, 183, 261, 369 |
| SatI | GCNGC | 2 cut(s) | 630, 633 |
| Sau3AI | GATC | 5 cut(s) | 102, 144, 268, 571, 647 |
| Sau96I | GGNCC | 2 cut(s) | 164, 409 |
| SchI | GAGTC | 1 cut(s) | 548 |
| ScrFI | CCNGG | 2 cut(s) | 162, 659 |
| SduI | GDGCHC | 1 cut(s) | 600 |
| SfaNI | GCATC | 3 cut(s) | 46, 292, 496 |
| SfcI | CTRYAG | 1 cut(s) | 457 |
| SinI | GGWCC | 1 cut(s) | 409 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 527 |
| SmlI | CTYRAG | 1 cut(s) | 206 |
| SmoI | CTYRAG | 1 cut(s) | 206 |
| Sse9I | AATT | 5 cut(s) | 344, 388, 432, 601, 671 |
| SseBI | AGGCCT | 1 cut(s) | 160 |
| SspMI | CTAG | 1 cut(s) | 512 |
| SstI | GAGCTC | 1 cut(s) | 600 |
| StuI | AGGCCT | 1 cut(s) | 160 |
| StyD4I | CCNGG | 2 cut(s) | 160, 657 |
| TaaI | ACNGT | 2 cut(s) | 91, 367 |
| TaiI | ACGT | 1 cut(s) | 238 |
| TaqI | TCGA | 1 cut(s) | 267 |
| TasI | AATT | 5 cut(s) | 344, 388, 432, 601, 671 |
| TfiI | GAWTC | 2 cut(s) | 373, 578 |
| Tru1I | TTAA | 4 cut(s) | 72, 183, 261, 369 |
| Tru9I | TTAA | 4 cut(s) | 72, 183, 261, 369 |
| TscAI | CASTG | 1 cut(s) | 96 |
| TseFI | GTSAC | 1 cut(s) | 236 |
| TseI | GCWGC | 2 cut(s) | 629, 632 |
| Tsp45I | GTSAC | 1 cut(s) | 236 |
| TspDTI | ATGAA | 5 cut(s) | 17, 240, 341, 374, 444 |
| TspRI | CASTG | 1 cut(s) | 96 |
| VpaK11BI | GGWCC | 1 cut(s) | 409 |
| VspI | ATTAAT | 1 cut(s) | 72 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 64 |
| XapI | RAATTY | 1 cut(s) | 432 |
| XbaI | TCTAGA | 1 cut(s) | 511 |
| XceI | RCATGY | 2 cut(s) | 244, 629 |
| XspI | CTAG | 1 cut(s) | 512 |