isoform X1
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 461 |
| AccB1I | GGYRCC | 1 cut(s) | 280 |
| AciI | CCGC | 1 cut(s) | 491 |
| AclWI | GGATC | 1 cut(s) | 480 |
| AcsI | RAATTY | 3 cut(s) | 232, 500, 662 |
| AfaI | GTAC | 2 cut(s) | 146, 617 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 290, 595 |
| AflII | CTTAAG | 2 cut(s) | 593, 901 |
| AjnI | CCWGG | 1 cut(s) | 154 |
| AloI | GAACNNNNNNTCC | 4 cut(s) | 289, 321, 464, 496 |
| AluBI | AGCT | 3 cut(s) | 168, 699, 874 |
| AluI | AGCT | 3 cut(s) | 168, 699, 874 |
| Alw21I | GWGCWC | 2 cut(s) | 29, 272 |
| Alw26I | GTCTC | 2 cut(s) | 35, 103 |
| Alw44I | GTGCAC | 1 cut(s) | 25 |
| AlwI | GGATC | 1 cut(s) | 480 |
| AoxI | GGCC | 1 cut(s) | 413 |
| ApaLI | GTGCAC | 1 cut(s) | 25 |
| ApoI | RAATTY | 3 cut(s) | 232, 500, 662 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 847, 879 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 753 |
| AsuHPI | GGTGA | 2 cut(s) | 675, 827 |
| AsuII | TTCGAA | 1 cut(s) | 483 |
| BaeGI | GKGCMC | 1 cut(s) | 29 |
| BanI | GGYRCC | 1 cut(s) | 280 |
| Bbv12I | GWGCWC | 2 cut(s) | 29, 272 |
| BciT130I | CCWGG | 1 cut(s) | 156 |
| BcoDI | GTCTC | 2 cut(s) | 35, 103 |
| BfaI | CTAG | 1 cut(s) | 858 |
| BfrI | CTTAAG | 2 cut(s) | 593, 901 |
| Bme1390I | CCNGG | 1 cut(s) | 156 |
| BmiI | GGNNCC | 2 cut(s) | 282, 423 |
| BmrFI | CCNGG | 1 cut(s) | 156 |
| BmsI | GCATC | 1 cut(s) | 376 |
| Bpu14I | TTCGAA | 1 cut(s) | 483 |
| BpuEI | CTTGAG | 1 cut(s) | 160 |
| BsaAI | YACGTR | 1 cut(s) | 30 |
| BsaI | GGTCTC | 1 cut(s) | 103 |
| BsaJI | CCNNGG | 1 cut(s) | 154 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 289, 319, 911, 941 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 290, 595 |
| Bse1I | ACTGG | 1 cut(s) | 541 |
| Bse3DI | GCAATG | 1 cut(s) | 793 |
| BseBI | CCWGG | 1 cut(s) | 156 |
| BseDI | CCNNGG | 1 cut(s) | 154 |
| BseGI | GGATG | 3 cut(s) | 10, 196, 337 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 290, 595 |
| BseMI | GCAATG | 1 cut(s) | 793 |
| BseNI | ACTGG | 1 cut(s) | 541 |
| BseRI | GAGGAG | 1 cut(s) | 558 |
| BseSI | GKGCMC | 1 cut(s) | 29 |
| BshFI | GGCC | 1 cut(s) | 415 |
| BshNI | GGYRCC | 1 cut(s) | 280 |
| BsiHKAI | GWGCWC | 2 cut(s) | 29, 272 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 290, 595 |
| BsmAI | GTCTC | 2 cut(s) | 35, 103 |
| BsmBI | CGTCTC | 1 cut(s) | 35 |
| BsnI | GGCC | 1 cut(s) | 415 |
| Bso31I | GGTCTC | 1 cut(s) | 103 |
| Bsp119I | TTCGAA | 1 cut(s) | 483 |
| Bsp1286I | GDGCHC | 2 cut(s) | 29, 272 |
| Bsp143I | GATC | 3 cut(s) | 45, 472, 761 |
| BspACI | CCGC | 1 cut(s) | 491 |
| BspANI | GGCC | 1 cut(s) | 415 |
| BspHI | TCATGA | 1 cut(s) | 442 |
| BspLI | GGNNCC | 2 cut(s) | 282, 423 |
| BspPI | GGATC | 1 cut(s) | 480 |
| BspT104I | TTCGAA | 1 cut(s) | 483 |
| BspT107I | GGYRCC | 1 cut(s) | 280 |
| BspTI | CTTAAG | 2 cut(s) | 593, 901 |
| BspTNI | GGTCTC | 1 cut(s) | 103 |
| BsrDI | GCAATG | 1 cut(s) | 793 |
| BsrI | ACTGG | 1 cut(s) | 541 |
| BssECI | CCNNGG | 1 cut(s) | 154 |
| BssMI | GATC | 3 cut(s) | 45, 472, 761 |
| Bst2UI | CCWGG | 1 cut(s) | 156 |
| Bst6I | CTCTTC | 1 cut(s) | 744 |
| BstAFI | CTTAAG | 2 cut(s) | 593, 901 |
| BstBAI | YACGTR | 1 cut(s) | 30 |
| BstBI | TTCGAA | 1 cut(s) | 483 |
| BstC8I | GCNNGC | 2 cut(s) | 697, 946 |
| BstF5I | GGATG | 3 cut(s) | 10, 196, 337 |
| BstKTI | GATC | 3 cut(s) | 48, 475, 764 |
| BstMAI | GTCTC | 2 cut(s) | 35, 103 |
| BstMBI | GATC | 3 cut(s) | 45, 472, 761 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 766 |
| BstNI | CCWGG | 1 cut(s) | 156 |
| BstNSI | RCATGY | 1 cut(s) | 948 |
| BstSCI | CCNGG | 1 cut(s) | 154 |
| BstSLI | GKGCMC | 1 cut(s) | 29 |
| BsuRI | GGCC | 1 cut(s) | 415 |
| BtsCI | GGATG | 3 cut(s) | 10, 196, 337 |
| BtsIMutI | CAGTG | 1 cut(s) | 369 |
| Cac8I | GCNNGC | 2 cut(s) | 697, 946 |
| CciI | TCATGA | 1 cut(s) | 442 |
| Csp6I | GTAC | 2 cut(s) | 145, 616 |
| CviAII | CATG | 7 cut(s) | 49, 274, 342, 354, 443, 467, 945 |
| CviJI | RGCY | 8 cut(s) | 168, 415, 422, 456, 699, 742, 874, 900 |
| CviKI_1 | RGCY | 8 cut(s) | 168, 415, 422, 456, 699, 742, 874, 900 |
| CviQI | GTAC | 2 cut(s) | 145, 616 |
| DpnI | GATC | 3 cut(s) | 47, 474, 763 |
| DpnII | GATC | 3 cut(s) | 45, 472, 761 |
| DraI | TTTAAA | 1 cut(s) | 225 |
| Eam1104I | CTCTTC | 1 cut(s) | 744 |
| EarI | CTCTTC | 1 cut(s) | 744 |
| Eco31I | GGTCTC | 1 cut(s) | 103 |
| EcoRI | GAATTC | 1 cut(s) | 232 |
| EcoRII | CCWGG | 1 cut(s) | 154 |
| EcoT22I | ATGCAT | 1 cut(s) | 793 |
| Esp3I | CGTCTC | 1 cut(s) | 35 |
| FaeI | CATG | 7 cut(s) | 52, 277, 345, 357, 446, 470, 948 |
| FatI | CATG | 7 cut(s) | 48, 273, 341, 353, 442, 466, 944 |
| FokI | GGATG | 3 cut(s) | 17, 203, 344 |
| FspBI | CTAG | 1 cut(s) | 858 |
| HaeIII | GGCC | 1 cut(s) | 415 |
| Hin1II | CATG | 7 cut(s) | 52, 277, 345, 357, 446, 470, 948 |
| HincII | GTYRAC | 2 cut(s) | 516, 646 |
| HindII | GTYRAC | 2 cut(s) | 516, 646 |
| HinfI | GANTC | 4 cut(s) | 121, 257, 563, 839 |
| HphI | GGTGA | 2 cut(s) | 675, 827 |
| Hpy166II | GTNNAC | 3 cut(s) | 27, 516, 646 |
| Hpy188III | TCNNGA | 4 cut(s) | 59, 443, 560, 630 |
| Hpy8I | GTNNAC | 3 cut(s) | 27, 516, 646 |
| HpyAV | CCTTC | 4 cut(s) | 479, 725, 890, 931 |
| HpyCH4IV | ACGT | 2 cut(s) | 29, 74 |
| HpyCH4V | TGCA | 9 cut(s) | 8, 20, 27, 317, 715, 769, 786, 791, 944 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 766 |
| HpySE526I | ACGT | 2 cut(s) | 29, 74 |
| Hsp92II | CATG | 7 cut(s) | 52, 277, 345, 357, 446, 470, 948 |
| Kzo9I | GATC | 3 cut(s) | 45, 472, 761 |
| LmnI | GCTCC | 2 cut(s) | 267, 427 |
| LpnPI | CCDG | 8 cut(s) | 141, 168, 429, 437, 522, 573, 615, 793 |
| LweI | GCATC | 1 cut(s) | 376 |
| MaeI | CTAG | 1 cut(s) | 858 |
| MaeII | ACGT | 2 cut(s) | 29, 74 |
| MalI | GATC | 3 cut(s) | 47, 474, 763 |
| MboI | GATC | 3 cut(s) | 45, 472, 761 |
| MboII | GAAGA | 3 cut(s) | 342, 736, 761 |
| MfeI | CAATTG | 1 cut(s) | 850 |
| MhlI | GDGCHC | 2 cut(s) | 29, 272 |
| MluCI | AATT | 6 cut(s) | 227, 232, 500, 634, 662, 850 |
| MlyI | GAGTC | 1 cut(s) | 848 |
| MmeI | TCCRAC | 1 cut(s) | 753 |
| Mph1103I | ATGCAT | 1 cut(s) | 793 |
| MroXI | GAANNNNTTC | 1 cut(s) | 753 |
| MseI | TTAA | 7 cut(s) | 78, 111, 224, 594, 846, 902, 909 |
| MslI | CAYNNNNRTG | 2 cut(s) | 32, 278 |
| MspCI | CTTAAG | 2 cut(s) | 593, 901 |
| MspR9I | CCNGG | 1 cut(s) | 156 |
| MunI | CAATTG | 1 cut(s) | 850 |
| MvaI | CCWGG | 1 cut(s) | 156 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 766 |
| NdeII | GATC | 3 cut(s) | 45, 472, 761 |
| NlaIII | CATG | 7 cut(s) | 52, 277, 345, 357, 446, 470, 948 |
| NlaIV | GGNNCC | 2 cut(s) | 282, 423 |
| NmeAIII | GCCGAG | 1 cut(s) | 862 |
| NsiI | ATGCAT | 1 cut(s) | 793 |
| NspI | RCATGY | 1 cut(s) | 948 |
| NspV | TTCGAA | 1 cut(s) | 483 |
| PaeI | GCATGC | 1 cut(s) | 948 |
| PagI | TCATGA | 1 cut(s) | 442 |
| PdmI | GAANNNNTTC | 1 cut(s) | 753 |
| PfeI | GAWTC | 3 cut(s) | 121, 257, 563 |
| PleI | GAGTC | 1 cut(s) | 847 |
| PpsI | GAGTC | 1 cut(s) | 847 |
| Ppu21I | YACGTR | 1 cut(s) | 30 |
| PsiI | TTATAA | 1 cut(s) | 461 |
| Psp6I | CCWGG | 1 cut(s) | 154 |
| PspGI | CCWGG | 1 cut(s) | 154 |
| PspN4I | GGNNCC | 2 cut(s) | 282, 423 |
| RsaI | GTAC | 2 cut(s) | 146, 617 |
| RsaNI | GTAC | 2 cut(s) | 145, 616 |
| RseI | CAYNNNNRTG | 2 cut(s) | 32, 278 |
| SaqAI | TTAA | 7 cut(s) | 78, 111, 224, 594, 846, 902, 909 |
| Sau3AI | GATC | 3 cut(s) | 45, 472, 761 |
| SchI | GAGTC | 1 cut(s) | 848 |
| ScrFI | CCNGG | 1 cut(s) | 156 |
| SduI | GDGCHC | 2 cut(s) | 29, 272 |
| SfaNI | GCATC | 1 cut(s) | 376 |
| SfuI | TTCGAA | 1 cut(s) | 483 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 32, 278 |
| SmlI | CTYRAG | 3 cut(s) | 139, 593, 901 |
| SmoI | CTYRAG | 3 cut(s) | 139, 593, 901 |
| SphI | GCATGC | 1 cut(s) | 948 |
| Sse9I | AATT | 6 cut(s) | 227, 232, 500, 634, 662, 850 |
| SsiI | CCGC | 1 cut(s) | 491 |
| SspI | AATATT | 1 cut(s) | 379 |
| SspMI | CTAG | 1 cut(s) | 858 |
| StyD4I | CCNGG | 1 cut(s) | 154 |
| TaiI | ACGT | 2 cut(s) | 32, 77 |
| TaqI | TCGA | 1 cut(s) | 483 |
| TasI | AATT | 6 cut(s) | 227, 232, 500, 634, 662, 850 |
| TfiI | GAWTC | 3 cut(s) | 121, 257, 563 |
| Tru1I | TTAA | 7 cut(s) | 78, 111, 224, 594, 846, 902, 909 |
| Tru9I | TTAA | 7 cut(s) | 78, 111, 224, 594, 846, 902, 909 |
| TscAI | CASTG | 1 cut(s) | 369 |
| TspDTI | ATGAA | 6 cut(s) | 80, 120, 330, 342, 564, 683 |
| TspRI | CASTG | 1 cut(s) | 369 |
| Vha464I | CTTAAG | 2 cut(s) | 593, 901 |
| VneI | GTGCAC | 1 cut(s) | 25 |
| XapI | RAATTY | 3 cut(s) | 232, 500, 662 |
| XceI | RCATGY | 1 cut(s) | 948 |
| XmnI | GAANNNNTTC | 1 cut(s) | 753 |
| XspI | CTAG | 1 cut(s) | 858 |
| Zsp2I | ATGCAT | 1 cut(s) | 793 |