MuDR family transposase
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 2 cut(s) | 510, 530 |
| AclI | AACGTT | 1 cut(s) | 275 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 407 |
| AflIII | ACRYGT | 1 cut(s) | 102 |
| AgsI | TTSAA | 4 cut(s) | 55, 179, 189, 242 |
| AjiI | CACGTC | 1 cut(s) | 506 |
| AjnI | CCWGG | 1 cut(s) | 342 |
| AluBI | AGCT | 4 cut(s) | 134, 215, 397, 432 |
| AluI | AGCT | 4 cut(s) | 134, 215, 397, 432 |
| Alw21I | GWGCWC | 2 cut(s) | 399, 434 |
| Alw26I | GTCTC | 1 cut(s) | 455 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 307 |
| AoxI | GGCC | 1 cut(s) | 69 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 237 |
| AspS9I | GGNCC | 1 cut(s) | 69 |
| AsuC2I | CCSGG | 2 cut(s) | 153, 382 |
| BaeGI | GKGCMC | 1 cut(s) | 515 |
| BanI | GGYRCC | 2 cut(s) | 510, 530 |
| BanII | GRGCYC | 2 cut(s) | 399, 434 |
| BbsI | GAAGAC | 1 cut(s) | 508 |
| Bbv12I | GWGCWC | 2 cut(s) | 399, 434 |
| BccI | CCATC | 3 cut(s) | 190, 263, 412 |
| BciT130I | CCWGG | 1 cut(s) | 344 |
| BcnI | CCSGG | 2 cut(s) | 153, 382 |
| BcoDI | GTCTC | 1 cut(s) | 455 |
| BfaI | CTAG | 1 cut(s) | 527 |
| Bme1390I | CCNGG | 3 cut(s) | 153, 344, 382 |
| BmgBI | CACGTC | 1 cut(s) | 506 |
| BmgT120I | GGNCC | 1 cut(s) | 69 |
| BmiI | GGNNCC | 4 cut(s) | 91, 423, 512, 532 |
| BmrFI | CCNGG | 3 cut(s) | 153, 344, 382 |
| BmsI | GCATC | 2 cut(s) | 73, 85 |
| BpiI | GAAGAC | 1 cut(s) | 508 |
| BpuMI | CCSGG | 2 cut(s) | 153, 382 |
| BsaJI | CCNNGG | 3 cut(s) | 72, 151, 381 |
| BsaWI | WCCGGW | 1 cut(s) | 368 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 213, 243, 490, 520 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 407 |
| Bse1I | ACTGG | 2 cut(s) | 254, 322 |
| BseBI | CCWGG | 1 cut(s) | 344 |
| BseDI | CCNNGG | 3 cut(s) | 72, 151, 381 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 407 |
| BseNI | ACTGG | 2 cut(s) | 254, 322 |
| BseSI | GKGCMC | 1 cut(s) | 515 |
| BshFI | GGCC | 1 cut(s) | 71 |
| BshNI | GGYRCC | 2 cut(s) | 510, 530 |
| BsiHKAI | GWGCWC | 2 cut(s) | 399, 434 |
| BsiSI | CCGG | 3 cut(s) | 153, 369, 381 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 407 |
| BsmAI | GTCTC | 1 cut(s) | 455 |
| BsmBI | CGTCTC | 1 cut(s) | 455 |
| BsmI | GAATGC | 1 cut(s) | 443 |
| BsnI | GGCC | 1 cut(s) | 71 |
| Bsp1286I | GDGCHC | 3 cut(s) | 399, 434, 515 |
| BspANI | GGCC | 1 cut(s) | 71 |
| BspLI | GGNNCC | 4 cut(s) | 91, 423, 512, 532 |
| BspQI | GCTCTTC | 1 cut(s) | 163 |
| BspT107I | GGYRCC | 2 cut(s) | 510, 530 |
| BsrI | ACTGG | 2 cut(s) | 254, 322 |
| BssECI | CCNNGG | 3 cut(s) | 72, 151, 381 |
| BssT1I | CCWWGG | 1 cut(s) | 72 |
| Bst2UI | CCWGG | 1 cut(s) | 344 |
| Bst4CI | ACNGT | 1 cut(s) | 459 |
| Bst6I | CTCTTC | 2 cut(s) | 163, 484 |
| BstC8I | GCNNGC | 1 cut(s) | 378 |
| BstMAI | GTCTC | 1 cut(s) | 455 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 56, 77 |
| BstNI | CCWGG | 1 cut(s) | 344 |
| BstSCI | CCNGG | 3 cut(s) | 151, 342, 380 |
| BstSLI | GKGCMC | 1 cut(s) | 515 |
| BstV2I | GAAGAC | 1 cut(s) | 508 |
| BsuRI | GGCC | 1 cut(s) | 71 |
| BtrI | CACGTC | 1 cut(s) | 506 |
| BtsIMutI | CAGTG | 1 cut(s) | 261 |
| Cac8I | GCNNGC | 1 cut(s) | 378 |
| CaiI | CAGNNNCTG | 1 cut(s) | 307 |
| Cfr13I | GGNCC | 1 cut(s) | 69 |
| CviJI | RGCY | 9 cut(s) | 71, 134, 156, 205, 215, 237, 342, 397, 432 |
| CviKI_1 | RGCY | 9 cut(s) | 71, 134, 156, 205, 215, 237, 342, 397, 432 |
| DraI | TTTAAA | 1 cut(s) | 13 |
| Eam1104I | CTCTTC | 2 cut(s) | 163, 484 |
| EarI | CTCTTC | 2 cut(s) | 163, 484 |
| Ecl136II | GAGCTC | 2 cut(s) | 397, 432 |
| Eco130I | CCWWGG | 1 cut(s) | 72 |
| Eco24I | GRGCYC | 2 cut(s) | 399, 434 |
| Eco53kI | GAGCTC | 2 cut(s) | 397, 432 |
| EcoICRI | GAGCTC | 2 cut(s) | 397, 432 |
| EcoRII | CCWGG | 1 cut(s) | 342 |
| EcoT14I | CCWWGG | 1 cut(s) | 72 |
| EcoT38I | GRGCYC | 2 cut(s) | 399, 434 |
| ErhI | CCWWGG | 1 cut(s) | 72 |
| Esp3I | CGTCTC | 1 cut(s) | 455 |
| FaiI | YATR | 6 cut(s) | 22, 24, 40, 87, 126, 264 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 35, 67 |
| FauNDI | CATATG | 1 cut(s) | 22 |
| FriOI | GRGCYC | 2 cut(s) | 399, 434 |
| FspBI | CTAG | 1 cut(s) | 527 |
| HaeIII | GGCC | 1 cut(s) | 71 |
| HapII | CCGG | 3 cut(s) | 153, 369, 381 |
| HinfI | GANTC | 2 cut(s) | 304, 331 |
| HpaII | CCGG | 3 cut(s) | 153, 369, 381 |
| Hpy188I | TCNGA | 2 cut(s) | 94, 201 |
| Hpy188III | TCNNGA | 2 cut(s) | 335, 408 |
| Hpy99I | CGWCG | 1 cut(s) | 479 |
| HpyAV | CCTTC | 3 cut(s) | 227, 315, 488 |
| HpyCH4III | ACNGT | 1 cut(s) | 459 |
| HpyCH4IV | ACGT | 3 cut(s) | 104, 275, 505 |
| HpyCH4V | TGCA | 4 cut(s) | 98, 142, 314, 470 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 56, 77 |
| HpySE526I | ACGT | 3 cut(s) | 104, 275, 505 |
| LguI | GCTCTTC | 1 cut(s) | 163 |
| LmnI | GCTCC | 1 cut(s) | 402 |
| LweI | GCATC | 2 cut(s) | 73, 85 |
| MaeI | CTAG | 1 cut(s) | 527 |
| MaeII | ACGT | 3 cut(s) | 104, 275, 505 |
| MaeIII | GTNAC | 1 cut(s) | 146 |
| MboII | GAAGA | 5 cut(s) | 150, 177, 498, 501, 513 |
| MhlI | GDGCHC | 3 cut(s) | 399, 434, 515 |
| MluCI | AATT | 2 cut(s) | 242, 364 |
| MmeI | TCCRAC | 1 cut(s) | 150 |
| MnlI | CCTC | 3 cut(s) | 166, 195, 215 |
| MroXI | GAANNNNTTC | 1 cut(s) | 237 |
| MseI | TTAA | 1 cut(s) | 12 |
| MspI | CCGG | 3 cut(s) | 153, 369, 381 |
| MspR9I | CCNGG | 3 cut(s) | 153, 344, 382 |
| Mva1269I | GAATGC | 1 cut(s) | 443 |
| MvaI | CCWGG | 1 cut(s) | 344 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 56, 77 |
| NciI | CCSGG | 2 cut(s) | 153, 382 |
| NdeI | CATATG | 1 cut(s) | 22 |
| NlaIV | GGNNCC | 4 cut(s) | 91, 423, 512, 532 |
| PciSI | GCTCTTC | 1 cut(s) | 163 |
| PctI | GAATGC | 1 cut(s) | 443 |
| PdmI | GAANNNNTTC | 1 cut(s) | 237 |
| PfeI | GAWTC | 2 cut(s) | 304, 331 |
| Psp124BI | GAGCTC | 2 cut(s) | 399, 434 |
| Psp1406I | AACGTT | 1 cut(s) | 275 |
| Psp6I | CCWGG | 1 cut(s) | 342 |
| PspGI | CCWGG | 1 cut(s) | 342 |
| PspN4I | GGNNCC | 4 cut(s) | 91, 423, 512, 532 |
| PspPI | GGNCC | 1 cut(s) | 69 |
| PstNI | CAGNNNCTG | 1 cut(s) | 307 |
| SacI | GAGCTC | 2 cut(s) | 399, 434 |
| SapI | GCTCTTC | 1 cut(s) | 163 |
| SaqAI | TTAA | 1 cut(s) | 12 |
| Sau96I | GGNCC | 1 cut(s) | 69 |
| ScrFI | CCNGG | 3 cut(s) | 153, 344, 382 |
| SduI | GDGCHC | 3 cut(s) | 399, 434, 515 |
| SfaNI | GCATC | 2 cut(s) | 73, 85 |
| Sse9I | AATT | 2 cut(s) | 242, 364 |
| SspMI | CTAG | 1 cut(s) | 527 |
| SstI | GAGCTC | 2 cut(s) | 399, 434 |
| StyD4I | CCNGG | 3 cut(s) | 151, 342, 380 |
| StyI | CCWWGG | 1 cut(s) | 72 |
| TaaI | ACNGT | 1 cut(s) | 459 |
| TaiI | ACGT | 3 cut(s) | 107, 278, 508 |
| TaqI | TCGA | 2 cut(s) | 357, 474 |
| TasI | AATT | 2 cut(s) | 242, 364 |
| TfiI | GAWTC | 2 cut(s) | 304, 331 |
| Tru1I | TTAA | 1 cut(s) | 12 |
| Tru9I | TTAA | 1 cut(s) | 12 |
| TscAI | CASTG | 1 cut(s) | 261 |
| TspDTI | ATGAA | 1 cut(s) | 27 |
| TspGWI | ACGGA | 3 cut(s) | 234, 434, 437 |
| TspRI | CASTG | 1 cut(s) | 261 |
| XmnI | GAANNNNTTC | 1 cut(s) | 237 |
| XspI | CTAG | 1 cut(s) | 527 |