plant mutator transposase zinc finger
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 825 |
| AarI | CACCTGC | 2 cut(s) | 2072, 2103 |
| AasI | GACNNNNNNGTC | 3 cut(s) | 224, 287, 1675 |
| Acc36I | ACCTGC | 2 cut(s) | 2072, 2103 |
| AccI | GTMKAC | 3 cut(s) | 887, 1735, 2053 |
| AccII | CGCG | 4 cut(s) | 31, 139, 624, 679 |
| AccIII | TCCGGA | 1 cut(s) | 690 |
| AciI | CCGC | 9 cut(s) | 29, 139, 563, 1204, 1240, 1556, 1624, 1816, 1886 |
| AclWI | GGATC | 5 cut(s) | 1047, 1060, 1892, 2065, 2078 |
| AcoI | YGGCCR | 1 cut(s) | 1205 |
| AcsI | RAATTY | 9 cut(s) | 129, 458, 479, 681, 744, 855, 963, 1022, 1472 |
| AcuI | CTGAAG | 1 cut(s) | 1173 |
| AcyI | GRCGYC | 1 cut(s) | 1657 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 401, 1699, 1759, 2081 |
| AjnI | CCWGG | 3 cut(s) | 228, 1128, 2047 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 620, 652 |
| AluBI | AGCT | 9 cut(s) | 41, 151, 597, 1262, 1359, 1594, 1633, 1708, 1720 |
| AluI | AGCT | 9 cut(s) | 41, 151, 597, 1262, 1359, 1594, 1633, 1708, 1720 |
| Alw21I | GWGCWC | 2 cut(s) | 1547, 1864 |
| Alw26I | GTCTC | 2 cut(s) | 423, 1220 |
| Alw44I | GTGCAC | 1 cut(s) | 1860 |
| AlwI | GGATC | 5 cut(s) | 1047, 1060, 1892, 2065, 2078 |
| Aor13HI | TCCGGA | 1 cut(s) | 690 |
| AoxI | GGCC | 2 cut(s) | 1205, 1249 |
| ApaLI | GTGCAC | 1 cut(s) | 1860 |
| ApeKI | GCWGC | 5 cut(s) | 41, 1594, 1649, 1664, 1874 |
| ApoI | RAATTY | 9 cut(s) | 129, 458, 479, 681, 744, 855, 963, 1022, 1472 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 707, 739, 1023, 1055 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1263 |
| AspLEI | GCGC | 3 cut(s) | 626, 679, 1094 |
| AsuHPI | GGTGA | 4 cut(s) | 1216, 1639, 1907, 2096 |
| AsuII | TTCGAA | 1 cut(s) | 748 |
| BaeGI | GKGCMC | 1 cut(s) | 1864 |
| BamHI | GGATCC | 2 cut(s) | 1052, 2070 |
| BbsI | GAAGAC | 3 cut(s) | 437, 929, 1488 |
| Bbv12I | GWGCWC | 2 cut(s) | 1547, 1864 |
| BbvI | GCAGC | 5 cut(s) | 28, 1581, 1636, 1676, 1886 |
| BccI | CCATC | 6 cut(s) | 205, 347, 700, 1043, 1348, 1886 |
| BceAI | ACGGC | 1 cut(s) | 883 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 653, 687 |
| BciT130I | CCWGG | 3 cut(s) | 230, 1130, 2049 |
| BcoDI | GTCTC | 2 cut(s) | 423, 1220 |
| BfaI | CTAG | 2 cut(s) | 152, 1478 |
| BfmI | CTRYAG | 3 cut(s) | 1140, 1951, 2079 |
| BfuAI | ACCTGC | 2 cut(s) | 2072, 2103 |
| BisI | GCNGC | 6 cut(s) | 42, 1205, 1595, 1650, 1665, 1875 |
| BlsI | GCNGC | 6 cut(s) | 43, 1206, 1596, 1651, 1666, 1876 |
| Bme1390I | CCNGG | 3 cut(s) | 230, 1130, 2049 |
| BmiI | GGNNCC | 3 cut(s) | 1054, 1917, 2072 |
| BmrFI | CCNGG | 3 cut(s) | 230, 1130, 2049 |
| BmrI | ACTGGG | 2 cut(s) | 1107, 1750 |
| BmsI | GCATC | 2 cut(s) | 295, 901 |
| BmuI | ACTGGG | 2 cut(s) | 1107, 1750 |
| BpiI | GAAGAC | 3 cut(s) | 437, 929, 1488 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 341, 373 |
| Bpu14I | TTCGAA | 1 cut(s) | 748 |
| BpuEI | CTTGAG | 2 cut(s) | 384, 971 |
| Bsa29I | ATCGAT | 1 cut(s) | 2099 |
| BsaAI | YACGTR | 2 cut(s) | 108, 2060 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1339 |
| BsaHI | GRCGYC | 1 cut(s) | 1657 |
| BsaI | GGTCTC | 1 cut(s) | 1220 |
| BsaJI | CCNNGG | 4 cut(s) | 1114, 1128, 1446, 2047 |
| BsaWI | WCCGGW | 1 cut(s) | 690 |
| BsaXI | ACNNNNNCTCC | 5 cut(s) | 26, 989, 1019, 1694, 1724 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 401, 1699, 1759, 2081 |
| Bse1I | ACTGG | 3 cut(s) | 1102, 1373, 1745 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1339 |
| BseAI | TCCGGA | 1 cut(s) | 690 |
| BseBI | CCWGG | 3 cut(s) | 230, 1130, 2049 |
| BseCI | ATCGAT | 1 cut(s) | 2099 |
| BseDI | CCNNGG | 4 cut(s) | 1114, 1128, 1446, 2047 |
| BseGI | GGATG | 6 cut(s) | 229, 328, 358, 376, 1750, 1894 |
| BseJI | GATNNNNATC | 1 cut(s) | 1339 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 401, 1699, 1759, 2081 |
| BseMII | CTCAG | 2 cut(s) | 300, 905 |
| BseNI | ACTGG | 3 cut(s) | 1102, 1373, 1745 |
| BseRI | GAGGAG | 2 cut(s) | 384, 387 |
| BseSI | GKGCMC | 1 cut(s) | 1864 |
| BseXI | GCAGC | 5 cut(s) | 28, 1581, 1636, 1676, 1886 |
| BseYI | CCCAGC | 1 cut(s) | 1087 |
| BsgI | GTGCAG | 1 cut(s) | 1683 |
| Bsh1236I | CGCG | 4 cut(s) | 31, 139, 624, 679 |
| Bsh1285I | CGRYCG | 2 cut(s) | 1240, 1757 |
| BshFI | GGCC | 2 cut(s) | 1207, 1251 |
| BshVI | ATCGAT | 1 cut(s) | 2099 |
| BsiEI | CGRYCG | 2 cut(s) | 1240, 1757 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1547, 1864 |
| BsiSI | CCGG | 1 cut(s) | 691 |
| BslFI | GGGAC | 2 cut(s) | 500, 1952 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 401, 1699, 1759, 2081 |
| BsmAI | GTCTC | 2 cut(s) | 423, 1220 |
| BsmFI | GGGAC | 2 cut(s) | 500, 1952 |
| BsnI | GGCC | 2 cut(s) | 1207, 1251 |
| Bso31I | GGTCTC | 1 cut(s) | 1220 |
| Bsp119I | TTCGAA | 1 cut(s) | 748 |
| Bsp1286I | GDGCHC | 2 cut(s) | 1547, 1864 |
| Bsp13I | TCCGGA | 1 cut(s) | 690 |
| Bsp143I | GATC | 8 cut(s) | 443, 1052, 1754, 1804, 1897, 2070, 2096, 2100 |
| BspACI | CCGC | 9 cut(s) | 29, 139, 563, 1204, 1240, 1556, 1624, 1816, 1886 |
| BspANI | GGCC | 2 cut(s) | 1207, 1251 |
| BspCNI | CTCAG | 2 cut(s) | 301, 904 |
| BspDI | ATCGAT | 1 cut(s) | 2099 |
| BspEI | TCCGGA | 1 cut(s) | 690 |
| BspFNI | CGCG | 4 cut(s) | 31, 139, 624, 679 |
| BspHI | TCATGA | 3 cut(s) | 421, 573, 1780 |
| BspLI | GGNNCC | 3 cut(s) | 1054, 1917, 2072 |
| BspMAI | CTGCAG | 1 cut(s) | 2083 |
| BspMI | ACCTGC | 2 cut(s) | 2072, 2103 |
| BspPI | GGATC | 5 cut(s) | 1047, 1060, 1892, 2065, 2078 |
| BspT104I | TTCGAA | 1 cut(s) | 748 |
| BspTNI | GGTCTC | 1 cut(s) | 1220 |
| BsrI | ACTGG | 3 cut(s) | 1102, 1373, 1745 |
| BssECI | CCNNGG | 4 cut(s) | 1114, 1128, 1446, 2047 |
| BssMI | GATC | 8 cut(s) | 443, 1052, 1754, 1804, 1897, 2070, 2096, 2100 |
| BssNAI | GTATAC | 1 cut(s) | 888 |
| BssNI | GRCGYC | 1 cut(s) | 1657 |
| BssT1I | CCWWGG | 2 cut(s) | 1114, 1446 |
| Bst1107I | GTATAC | 1 cut(s) | 888 |
| Bst2UI | CCWGG | 3 cut(s) | 230, 1130, 2049 |
| Bst4CI | ACNGT | 4 cut(s) | 79, 240, 944, 1930 |
| Bst6I | CTCTTC | 4 cut(s) | 17, 312, 342, 992 |
| BstACI | GRCGYC | 1 cut(s) | 1657 |
| BstBAI | YACGTR | 2 cut(s) | 108, 2060 |
| BstBI | TTCGAA | 1 cut(s) | 748 |
| BstC8I | GCNNGC | 3 cut(s) | 149, 582, 599 |
| BstDEI | CTNAG | 3 cut(s) | 309, 891, 1180 |
| BstEII | GGTNACC | 2 cut(s) | 1109, 2009 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 399 |
| BstF5I | GGATG | 6 cut(s) | 229, 328, 358, 376, 1750, 1894 |
| BstFNI | CGCG | 4 cut(s) | 31, 139, 624, 679 |
| BstHHI | GCGC | 3 cut(s) | 626, 679, 1094 |
| BstKTI | GATC | 8 cut(s) | 446, 1055, 1757, 1807, 1900, 2073, 2099, 2103 |
| BstMAI | GTCTC | 2 cut(s) | 423, 1220 |
| BstMBI | GATC | 8 cut(s) | 443, 1052, 1754, 1804, 1897, 2070, 2096, 2100 |
| BstMCI | CGRYCG | 2 cut(s) | 1240, 1757 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 50, 1248, 1594, 1630, 1874, 1883 |
| BstNI | CCWGG | 3 cut(s) | 230, 1130, 2049 |
| BstNSI | RCATGY | 3 cut(s) | 584, 1824, 1868 |
| BstPI | GGTNACC | 2 cut(s) | 1109, 2009 |
| BstSCI | CCNGG | 3 cut(s) | 228, 1128, 2047 |
| BstSFI | CTRYAG | 3 cut(s) | 1140, 1951, 2079 |
| BstSLI | GKGCMC | 1 cut(s) | 1864 |
| BstSNI | TACGTA | 1 cut(s) | 108 |
| BstUI | CGCG | 4 cut(s) | 31, 139, 624, 679 |
| BstV1I | GCAGC | 5 cut(s) | 28, 1581, 1636, 1676, 1886 |
| BstV2I | GAAGAC | 3 cut(s) | 437, 929, 1488 |
| BstX2I | RGATCY | 2 cut(s) | 1052, 2070 |
| BstYI | RGATCY | 2 cut(s) | 1052, 2070 |
| BstZ17I | GTATAC | 1 cut(s) | 888 |
| Bsu15I | ATCGAT | 1 cut(s) | 2099 |
| BsuRI | GGCC | 2 cut(s) | 1207, 1251 |
| BsuTUI | ATCGAT | 1 cut(s) | 2099 |
| BtgZI | GCGATG | 1 cut(s) | 885 |
| BtsCI | GGATG | 6 cut(s) | 229, 328, 358, 376, 1750, 1894 |
| BtsI | GCAGTG | 1 cut(s) | 90 |
| BtsIMutI | CAGTG | 4 cut(s) | 90, 940, 1738, 1935 |
| BveI | ACCTGC | 2 cut(s) | 2072, 2103 |
| Cac8I | GCNNGC | 3 cut(s) | 149, 582, 599 |
| CciI | TCATGA | 3 cut(s) | 421, 573, 1780 |
| CfoI | GCGC | 3 cut(s) | 626, 679, 1094 |
| ClaI | ATCGAT | 1 cut(s) | 2099 |
| CseI | GACGC | 1 cut(s) | 1646 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 60, 95, 1435, 1470 |
| DdeI | CTNAG | 3 cut(s) | 309, 891, 1180 |
| DpnI | GATC | 8 cut(s) | 445, 1054, 1756, 1806, 1899, 2072, 2098, 2102 |
| DpnII | GATC | 8 cut(s) | 443, 1052, 1754, 1804, 1897, 2070, 2096, 2100 |
| DrdI | GACNNNNNNGTC | 3 cut(s) | 224, 287, 1675 |
| DseDI | GACNNNNNNGTC | 3 cut(s) | 224, 287, 1675 |
| EaeI | YGGCCR | 1 cut(s) | 1205 |
| Eam1104I | CTCTTC | 4 cut(s) | 17, 312, 342, 992 |
| EarI | CTCTTC | 4 cut(s) | 17, 312, 342, 992 |
| EciI | GGCGGA | 1 cut(s) | 1571 |
| Eco105I | TACGTA | 1 cut(s) | 108 |
| Eco130I | CCWWGG | 2 cut(s) | 1114, 1446 |
| Eco147I | AGGCCT | 1 cut(s) | 1251 |
| Eco31I | GGTCTC | 1 cut(s) | 1220 |
| Eco32I | GATATC | 1 cut(s) | 277 |
| Eco57I | CTGAAG | 1 cut(s) | 1173 |
| Eco91I | GGTNACC | 2 cut(s) | 1109, 2009 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 399 |
| EcoO65I | GGTNACC | 2 cut(s) | 1109, 2009 |
| EcoRI | GAATTC | 1 cut(s) | 681 |
| EcoRII | CCWGG | 3 cut(s) | 228, 1128, 2047 |
| EcoRV | GATATC | 1 cut(s) | 277 |
| EcoT14I | CCWWGG | 2 cut(s) | 1114, 1446 |
| EcoT22I | ATGCAT | 2 cut(s) | 832, 916 |
| ErhI | CCWWGG | 2 cut(s) | 1114, 1446 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 971, 1003, 1239, 1271 |
| FaqI | GGGAC | 2 cut(s) | 500, 1952 |
| FauI | CCCGC | 2 cut(s) | 1617, 1823 |
| FauNDI | CATATG | 3 cut(s) | 119, 1431, 1909 |
| FblI | GTMKAC | 3 cut(s) | 887, 1735, 2053 |
| Fnu4HI | GCNGC | 6 cut(s) | 42, 1205, 1595, 1650, 1665, 1875 |
| FokI | GGATG | 6 cut(s) | 236, 335, 365, 383, 1757, 1901 |
| Fsp4HI | GCNGC | 6 cut(s) | 42, 1205, 1595, 1650, 1665, 1875 |
| FspBI | CTAG | 2 cut(s) | 152, 1478 |
| GlaI | GCGC | 3 cut(s) | 625, 678, 1093 |
| GluI | GCNGC | 6 cut(s) | 42, 1205, 1595, 1650, 1665, 1875 |
| GsaI | CCCAGC | 1 cut(s) | 1091 |
| HaeIII | GGCC | 2 cut(s) | 1207, 1251 |
| HapII | CCGG | 1 cut(s) | 691 |
| HgaI | GACGC | 1 cut(s) | 1646 |
| HhaI | GCGC | 3 cut(s) | 626, 679, 1094 |
| Hin1I | GRCGYC | 1 cut(s) | 1657 |
| Hin6I | GCGC | 3 cut(s) | 624, 677, 1092 |
| HinP1I | GCGC | 3 cut(s) | 624, 677, 1092 |
| HincII | GTYRAC | 3 cut(s) | 174, 1147, 1680 |
| HindII | GTYRAC | 3 cut(s) | 174, 1147, 1680 |
| HpaI | GTTAAC | 1 cut(s) | 174 |
| HpaII | CCGG | 1 cut(s) | 691 |
| HphI | GGTGA | 4 cut(s) | 1216, 1639, 1907, 2096 |
| Hpy166II | GTNNAC | 8 cut(s) | 174, 865, 888, 1147, 1680, 1736, 1862, 2054 |
| Hpy188I | TCNGA | 7 cut(s) | 217, 1153, 1237, 1288, 1329, 1978, 2142 |
| Hpy8I | GTNNAC | 8 cut(s) | 174, 865, 888, 1147, 1680, 1736, 1862, 2054 |
| Hpy99I | CGWCG | 4 cut(s) | 886, 962, 1662, 1762 |
| HpyAV | CCTTC | 9 cut(s) | 581, 1007, 1237, 1262, 1445, 1608, 1804, 1886, 2061 |
| HpyCH4III | ACNGT | 4 cut(s) | 79, 240, 944, 1930 |
| HpyCH4IV | ACGT | 3 cut(s) | 107, 973, 2059 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 50, 1248, 1594, 1630, 1874, 1883 |
| HpyF3I | CTNAG | 3 cut(s) | 309, 891, 1180 |
| HpySE526I | ACGT | 3 cut(s) | 107, 973, 2059 |
| Hsp92I | GRCGYC | 1 cut(s) | 1657 |
| HspAI | GCGC | 3 cut(s) | 624, 677, 1092 |
| Kpn2I | TCCGGA | 1 cut(s) | 690 |
| KspAI | GTTAAC | 1 cut(s) | 174 |
| Kzo9I | GATC | 8 cut(s) | 443, 1052, 1754, 1804, 1897, 2070, 2096, 2100 |
| LmnI | GCTCC | 3 cut(s) | 397, 550, 1408 |
| Lsp1109I | GCAGC | 5 cut(s) | 28, 1581, 1636, 1676, 1886 |
| LweI | GCATC | 2 cut(s) | 295, 901 |
| MaeI | CTAG | 2 cut(s) | 152, 1478 |
| MaeII | ACGT | 3 cut(s) | 107, 973, 2059 |
| MaeIII | GTNAC | 8 cut(s) | 472, 556, 969, 1016, 1109, 1364, 1412, 2009 |
| MalI | GATC | 8 cut(s) | 445, 1054, 1756, 1806, 1899, 2072, 2098, 2102 |
| MboI | GATC | 8 cut(s) | 443, 1052, 1754, 1804, 1897, 2070, 2096, 2100 |
| MfeI | CAATTG | 3 cut(s) | 183, 1165, 1607 |
| MflI | RGATCY | 2 cut(s) | 1052, 2070 |
| MhlI | GDGCHC | 2 cut(s) | 1547, 1864 |
| MlyI | GAGTC | 6 cut(s) | 34, 62, 681, 978, 1142, 1568 |
| MmeI | TCCRAC | 1 cut(s) | 1260 |
| Mph1103I | ATGCAT | 2 cut(s) | 832, 916 |
| MroI | TCCGGA | 1 cut(s) | 690 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1263 |
| MseI | TTAA | 5 cut(s) | 96, 173, 645, 1614, 2022 |
| MslI | CAYNNNNRTG | 4 cut(s) | 801, 870, 1430, 1743 |
| MspA1I | CMGCKG | 1 cut(s) | 563 |
| MspI | CCGG | 1 cut(s) | 691 |
| MspR9I | CCNGG | 3 cut(s) | 230, 1130, 2049 |
| MunI | CAATTG | 3 cut(s) | 183, 1165, 1607 |
| MvaI | CCWGG | 3 cut(s) | 230, 1130, 2049 |
| MvnI | CGCG | 4 cut(s) | 31, 139, 624, 679 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 50, 1248, 1594, 1630, 1874, 1883 |
| NdeI | CATATG | 3 cut(s) | 119, 1431, 1909 |
| NdeII | GATC | 8 cut(s) | 443, 1052, 1754, 1804, 1897, 2070, 2096, 2100 |
| NlaIV | GGNNCC | 3 cut(s) | 1054, 1917, 2072 |
| NmuCI | GTSAC | 1 cut(s) | 969 |
| NsiI | ATGCAT | 2 cut(s) | 832, 916 |
| NspI | RCATGY | 3 cut(s) | 584, 1824, 1868 |
| NspV | TTCGAA | 1 cut(s) | 748 |
| PaeI | GCATGC | 1 cut(s) | 584 |
| PagI | TCATGA | 3 cut(s) | 421, 573, 1780 |
| PaqCI | CACCTGC | 2 cut(s) | 2072, 2103 |
| PceI | AGGCCT | 1 cut(s) | 1251 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 979 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1263 |
| PfeI | GAWTC | 5 cut(s) | 619, 633, 878, 1283, 1461 |
| PkrI | GCNGC | 6 cut(s) | 43, 1206, 1596, 1651, 1666, 1876 |
| Ple19I | CGATCG | 1 cut(s) | 1757 |
| PleI | GAGTC | 6 cut(s) | 33, 62, 681, 978, 1142, 1567 |
| PpsI | GAGTC | 6 cut(s) | 33, 62, 681, 978, 1142, 1567 |
| Ppu21I | YACGTR | 2 cut(s) | 108, 2060 |
| PsiI | TTATAA | 1 cut(s) | 825 |
| Psp6I | CCWGG | 3 cut(s) | 228, 1128, 2047 |
| PspEI | GGTNACC | 2 cut(s) | 1109, 2009 |
| PspFI | CCCAGC | 1 cut(s) | 1087 |
| PspGI | CCWGG | 3 cut(s) | 228, 1128, 2047 |
| PspN4I | GGNNCC | 3 cut(s) | 1054, 1917, 2072 |
| PstI | CTGCAG | 1 cut(s) | 2083 |
| PsuI | RGATCY | 2 cut(s) | 1052, 2070 |
| PvuI | CGATCG | 1 cut(s) | 1757 |
| RseI | CAYNNNNRTG | 4 cut(s) | 801, 870, 1430, 1743 |
| SaqAI | TTAA | 5 cut(s) | 96, 173, 645, 1614, 2022 |
| SatI | GCNGC | 6 cut(s) | 42, 1205, 1595, 1650, 1665, 1875 |
| Sau3AI | GATC | 8 cut(s) | 443, 1052, 1754, 1804, 1897, 2070, 2096, 2100 |
| SchI | GAGTC | 6 cut(s) | 34, 62, 681, 978, 1142, 1568 |
| ScrFI | CCNGG | 3 cut(s) | 230, 1130, 2049 |
| SduI | GDGCHC | 2 cut(s) | 1547, 1864 |
| SfaNI | GCATC | 2 cut(s) | 295, 901 |
| SfcI | CTRYAG | 3 cut(s) | 1140, 1951, 2079 |
| SfuI | TTCGAA | 1 cut(s) | 748 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 801, 870, 1430, 1743 |
| SmlI | CTYRAG | 2 cut(s) | 399, 950 |
| SmoI | CTYRAG | 2 cut(s) | 399, 950 |
| SnaBI | TACGTA | 1 cut(s) | 108 |
| SphI | GCATGC | 1 cut(s) | 584 |
| SseBI | AGGCCT | 1 cut(s) | 1251 |
| SsiI | CCGC | 9 cut(s) | 29, 139, 563, 1204, 1240, 1556, 1624, 1816, 1886 |
| SspI | AATATT | 1 cut(s) | 1189 |
| SspMI | CTAG | 2 cut(s) | 152, 1478 |
| StuI | AGGCCT | 1 cut(s) | 1251 |
| StyD4I | CCNGG | 3 cut(s) | 228, 1128, 2047 |
| StyI | CCWWGG | 2 cut(s) | 1114, 1446 |
| TaaI | ACNGT | 4 cut(s) | 79, 240, 944, 1930 |
| TaiI | ACGT | 3 cut(s) | 110, 976, 2062 |
| TaqI | TCGA | 9 cut(s) | 251, 279, 303, 462, 673, 685, 748, 1757, 2099 |
| TauI | GCSGC | 1 cut(s) | 1207 |
| TfiI | GAWTC | 5 cut(s) | 619, 633, 878, 1283, 1461 |
| Tru1I | TTAA | 5 cut(s) | 96, 173, 645, 1614, 2022 |
| Tru9I | TTAA | 5 cut(s) | 96, 173, 645, 1614, 2022 |
| TscAI | CASTG | 4 cut(s) | 90, 947, 1745, 1935 |
| TseFI | GTSAC | 1 cut(s) | 969 |
| TseI | GCWGC | 5 cut(s) | 41, 1594, 1649, 1664, 1874 |
| Tsp45I | GTSAC | 1 cut(s) | 969 |
| TspGWI | ACGGA | 1 cut(s) | 1775 |
| TspRI | CASTG | 4 cut(s) | 90, 947, 1745, 1935 |
| VneI | GTGCAC | 1 cut(s) | 1860 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 399 |
| XapI | RAATTY | 9 cut(s) | 129, 458, 479, 681, 744, 855, 963, 1022, 1472 |
| XbaI | TCTAGA | 1 cut(s) | 1477 |
| XceI | RCATGY | 3 cut(s) | 584, 1824, 1868 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 61, 1497 |
| XmiI | GTMKAC | 3 cut(s) | 887, 1735, 2053 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1263 |
| XspI | CTAG | 2 cut(s) | 152, 1478 |
| Zsp2I | ATGCAT | 2 cut(s) | 832, 916 |