isoform X1
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 147 |
| AciI | CCGC | 5 cut(s) | 76, 168, 553, 597, 606 |
| AcoI | YGGCCR | 4 cut(s) | 169, 186, 467, 598 |
| AcsI | RAATTY | 1 cut(s) | 129 |
| AcuI | CTGAAG | 1 cut(s) | 299 |
| AfaI | GTAC | 1 cut(s) | 422 |
| AgsI | TTSAA | 6 cut(s) | 70, 128, 140, 442, 550, 559 |
| AjnI | CCWGG | 3 cut(s) | 215, 328, 542 |
| AluBI | AGCT | 4 cut(s) | 386, 450, 586, 636 |
| AluI | AGCT | 4 cut(s) | 386, 450, 586, 636 |
| AoxI | GGCC | 6 cut(s) | 169, 186, 367, 467, 539, 598 |
| ApeKI | GCWGC | 3 cut(s) | 374, 386, 636 |
| ApoI | RAATTY | 1 cut(s) | 129 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 554 |
| AspS9I | GGNCC | 1 cut(s) | 540 |
| BaeGI | GKGCMC | 2 cut(s) | 152, 620 |
| BalI | TGGCCA | 1 cut(s) | 188 |
| BanI | GGYRCC | 1 cut(s) | 147 |
| BbsI | GAAGAC | 1 cut(s) | 483 |
| BbvI | GCAGC | 3 cut(s) | 361, 373, 623 |
| BccI | CCATC | 1 cut(s) | 283 |
| BceAI | ACGGC | 2 cut(s) | 382, 585 |
| BciT130I | CCWGG | 3 cut(s) | 217, 330, 544 |
| BfaI | CTAG | 1 cut(s) | 324 |
| BfmI | CTRYAG | 1 cut(s) | 451 |
| BisI | GCNGC | 5 cut(s) | 169, 375, 387, 598, 637 |
| BlsI | GCNGC | 5 cut(s) | 170, 376, 388, 599, 638 |
| BmcAI | AGTACT | 1 cut(s) | 422 |
| Bme1390I | CCNGG | 3 cut(s) | 217, 330, 544 |
| BmgT120I | GGNCC | 1 cut(s) | 540 |
| BmiI | GGNNCC | 1 cut(s) | 149 |
| BmrFI | CCNGG | 3 cut(s) | 217, 330, 544 |
| BmsI | GCATC | 1 cut(s) | 228 |
| BpiI | GAAGAC | 1 cut(s) | 483 |
| Bpu10I | CCTNAGC | 1 cut(s) | 83 |
| BpuEI | CTTGAG | 1 cut(s) | 248 |
| BsaJI | CCNNGG | 2 cut(s) | 328, 542 |
| Bse1I | ACTGG | 1 cut(s) | 134 |
| BseBI | CCWGG | 3 cut(s) | 217, 330, 544 |
| BseDI | CCNNGG | 2 cut(s) | 328, 542 |
| BseMII | CTCAG | 2 cut(s) | 42, 93 |
| BseNI | ACTGG | 1 cut(s) | 134 |
| BseSI | GKGCMC | 2 cut(s) | 152, 620 |
| BseX3I | CGGCCG | 2 cut(s) | 169, 598 |
| BseXI | GCAGC | 3 cut(s) | 361, 373, 623 |
| BsgI | GTGCAG | 2 cut(s) | 305, 622 |
| Bsh1285I | CGRYCG | 2 cut(s) | 172, 601 |
| BshFI | GGCC | 6 cut(s) | 171, 188, 369, 469, 541, 600 |
| BshNI | GGYRCC | 1 cut(s) | 147 |
| BsiEI | CGRYCG | 2 cut(s) | 172, 601 |
| BsiSI | CCGG | 1 cut(s) | 466 |
| BsnI | GGCC | 6 cut(s) | 171, 188, 369, 469, 541, 600 |
| Bsp1286I | GDGCHC | 2 cut(s) | 152, 620 |
| Bsp143I | GATC | 1 cut(s) | 342 |
| BspACI | CCGC | 5 cut(s) | 76, 168, 553, 597, 606 |
| BspANI | GGCC | 6 cut(s) | 171, 188, 369, 469, 541, 600 |
| BspCNI | CTCAG | 2 cut(s) | 43, 94 |
| BspLI | GGNNCC | 1 cut(s) | 149 |
| BspQI | GCTCTTC | 2 cut(s) | 440, 626 |
| BspT107I | GGYRCC | 1 cut(s) | 147 |
| BsrI | ACTGG | 1 cut(s) | 134 |
| BssECI | CCNNGG | 2 cut(s) | 328, 542 |
| BssMI | GATC | 1 cut(s) | 342 |
| Bst2UI | CCWGG | 3 cut(s) | 217, 330, 544 |
| Bst4CI | ACNGT | 2 cut(s) | 65, 455 |
| Bst6I | CTCTTC | 3 cut(s) | 440, 530, 626 |
| BstDEI | CTNAG | 3 cut(s) | 51, 83, 102 |
| BstKTI | GATC | 1 cut(s) | 345 |
| BstMBI | GATC | 1 cut(s) | 342 |
| BstMCI | CGRYCG | 2 cut(s) | 172, 601 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 238, 283, 383, 603 |
| BstNI | CCWGG | 3 cut(s) | 217, 330, 544 |
| BstSCI | CCNGG | 3 cut(s) | 215, 328, 542 |
| BstSFI | CTRYAG | 1 cut(s) | 451 |
| BstSLI | GKGCMC | 2 cut(s) | 152, 620 |
| BstV1I | GCAGC | 3 cut(s) | 361, 373, 623 |
| BstV2I | GAAGAC | 1 cut(s) | 483 |
| BstZI | CGGCCG | 2 cut(s) | 169, 598 |
| BsuRI | GGCC | 6 cut(s) | 171, 188, 369, 469, 541, 600 |
| BtsIMutI | CAGTG | 1 cut(s) | 316 |
| Cfr13I | GGNCC | 1 cut(s) | 540 |
| Csp6I | GTAC | 1 cut(s) | 421 |
| CviQI | GTAC | 1 cut(s) | 421 |
| DdeI | CTNAG | 3 cut(s) | 51, 83, 102 |
| DpnI | GATC | 1 cut(s) | 344 |
| DpnII | GATC | 1 cut(s) | 342 |
| EaeI | YGGCCR | 4 cut(s) | 169, 186, 467, 598 |
| EagI | CGGCCG | 2 cut(s) | 169, 598 |
| Eam1104I | CTCTTC | 3 cut(s) | 440, 530, 626 |
| EarI | CTCTTC | 3 cut(s) | 440, 530, 626 |
| EclXI | CGGCCG | 2 cut(s) | 169, 598 |
| Eco52I | CGGCCG | 2 cut(s) | 169, 598 |
| Eco57I | CTGAAG | 1 cut(s) | 299 |
| EcoRII | CCWGG | 3 cut(s) | 215, 328, 542 |
| FaiI | YATR | 9 cut(s) | 40, 162, 339, 405, 411, 437, 488, 518, 624 |
| Fnu4HI | GCNGC | 5 cut(s) | 169, 375, 387, 598, 637 |
| Fsp4HI | GCNGC | 5 cut(s) | 169, 375, 387, 598, 637 |
| FspBI | CTAG | 1 cut(s) | 324 |
| GluI | GCNGC | 5 cut(s) | 169, 375, 387, 598, 637 |
| HaeIII | GGCC | 6 cut(s) | 171, 188, 369, 469, 541, 600 |
| HapII | CCGG | 1 cut(s) | 466 |
| HinfI | GANTC | 3 cut(s) | 256, 500, 589 |
| HpaII | CCGG | 1 cut(s) | 466 |
| Hpy188I | TCNGA | 4 cut(s) | 394, 499, 534, 578 |
| Hpy188III | TCNNGA | 1 cut(s) | 442 |
| Hpy99I | CGWCG | 1 cut(s) | 247 |
| HpyAV | CCTTC | 3 cut(s) | 49, 274, 539 |
| HpyCH4III | ACNGT | 2 cut(s) | 65, 455 |
| HpyCH4V | TGCA | 6 cut(s) | 38, 155, 200, 286, 377, 639 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 238, 283, 383, 603 |
| HpyF3I | CTNAG | 3 cut(s) | 51, 83, 102 |
| Kzo9I | GATC | 1 cut(s) | 342 |
| LguI | GCTCTTC | 2 cut(s) | 440, 626 |
| Lsp1109I | GCAGC | 3 cut(s) | 361, 373, 623 |
| LweI | GCATC | 1 cut(s) | 228 |
| MaeI | CTAG | 1 cut(s) | 324 |
| MalI | GATC | 1 cut(s) | 344 |
| MboI | GATC | 1 cut(s) | 342 |
| MboII | GAAGA | 7 cut(s) | 20, 31, 457, 483, 486, 547, 643 |
| MfeI | CAATTG | 1 cut(s) | 346 |
| MhlI | GDGCHC | 2 cut(s) | 152, 620 |
| MlsI | TGGCCA | 1 cut(s) | 188 |
| MluCI | AATT | 4 cut(s) | 70, 129, 203, 346 |
| MluNI | TGGCCA | 1 cut(s) | 188 |
| MlyI | GAGTC | 1 cut(s) | 250 |
| MmeI | TCCRAC | 1 cut(s) | 556 |
| MnlI | CCTC | 7 cut(s) | 55, 262, 372, 531, 534, 565, 657 |
| Mox20I | TGGCCA | 1 cut(s) | 188 |
| MroXI | GAANNNNTTC | 1 cut(s) | 554 |
| MscI | TGGCCA | 1 cut(s) | 188 |
| MseI | TTAA | 3 cut(s) | 15, 30, 210 |
| Msp20I | TGGCCA | 1 cut(s) | 188 |
| MspI | CCGG | 1 cut(s) | 466 |
| MspR9I | CCNGG | 3 cut(s) | 217, 330, 544 |
| MunI | CAATTG | 1 cut(s) | 346 |
| MvaI | CCWGG | 3 cut(s) | 217, 330, 544 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 238, 283, 383, 603 |
| NdeII | GATC | 1 cut(s) | 342 |
| NlaIV | GGNNCC | 1 cut(s) | 149 |
| PciSI | GCTCTTC | 2 cut(s) | 440, 626 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 598 |
| PdmI | GAANNNNTTC | 1 cut(s) | 554 |
| PfeI | GAWTC | 2 cut(s) | 500, 589 |
| PfoI | TCCNGGA | 1 cut(s) | 215 |
| PkrI | GCNGC | 5 cut(s) | 170, 376, 388, 599, 638 |
| PleI | GAGTC | 1 cut(s) | 250 |
| PpsI | GAGTC | 1 cut(s) | 250 |
| Psp6I | CCWGG | 3 cut(s) | 215, 328, 542 |
| PspGI | CCWGG | 3 cut(s) | 215, 328, 542 |
| PspN4I | GGNNCC | 1 cut(s) | 149 |
| PspPI | GGNCC | 1 cut(s) | 540 |
| RsaI | GTAC | 1 cut(s) | 422 |
| RsaNI | GTAC | 1 cut(s) | 421 |
| SapI | GCTCTTC | 2 cut(s) | 440, 626 |
| SaqAI | TTAA | 3 cut(s) | 15, 30, 210 |
| SatI | GCNGC | 5 cut(s) | 169, 375, 387, 598, 637 |
| Sau3AI | GATC | 1 cut(s) | 342 |
| Sau96I | GGNCC | 1 cut(s) | 540 |
| ScaI | AGTACT | 1 cut(s) | 422 |
| SchI | GAGTC | 1 cut(s) | 250 |
| ScrFI | CCNGG | 3 cut(s) | 217, 330, 544 |
| SduI | GDGCHC | 2 cut(s) | 152, 620 |
| SfaNI | GCATC | 1 cut(s) | 228 |
| SfcI | CTRYAG | 1 cut(s) | 451 |
| SmlI | CTYRAG | 1 cut(s) | 227 |
| SmoI | CTYRAG | 1 cut(s) | 227 |
| Sse9I | AATT | 4 cut(s) | 70, 129, 203, 346 |
| SsiI | CCGC | 5 cut(s) | 76, 168, 553, 597, 606 |
| SspMI | CTAG | 1 cut(s) | 324 |
| StyD4I | CCNGG | 3 cut(s) | 215, 328, 542 |
| TaaI | ACNGT | 2 cut(s) | 65, 455 |
| TasI | AATT | 4 cut(s) | 70, 129, 203, 346 |
| TatI | WGTACW | 1 cut(s) | 420 |
| TauI | GCSGC | 2 cut(s) | 171, 600 |
| TfiI | GAWTC | 2 cut(s) | 500, 589 |
| Tru1I | TTAA | 3 cut(s) | 15, 30, 210 |
| Tru9I | TTAA | 3 cut(s) | 15, 30, 210 |
| TscAI | CASTG | 1 cut(s) | 316 |
| TseI | GCWGC | 3 cut(s) | 374, 386, 636 |
| TspRI | CASTG | 1 cut(s) | 316 |
| XapI | RAATTY | 1 cut(s) | 129 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 141 |
| XmnI | GAANNNNTTC | 1 cut(s) | 554 |
| XspI | CTAG | 1 cut(s) | 324 |
| ZrmI | AGTACT | 1 cut(s) | 422 |