MuDR family transposase
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 501 |
| AclWI | GGATC | 2 cut(s) | 354, 446 |
| AcoI | YGGCCR | 1 cut(s) | 496 |
| AgsI | TTSAA | 2 cut(s) | 77, 236 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 318, 350 |
| AluBI | AGCT | 4 cut(s) | 160, 172, 329, 527 |
| AluI | AGCT | 4 cut(s) | 160, 172, 329, 527 |
| Alw21I | GWGCWC | 2 cut(s) | 245, 319 |
| Alw44I | GTGCAC | 2 cut(s) | 241, 315 |
| AlwI | GGATC | 2 cut(s) | 354, 446 |
| AoxI | GGCC | 3 cut(s) | 120, 459, 496 |
| ApaLI | GTGCAC | 2 cut(s) | 241, 315 |
| ApeKI | GCWGC | 3 cut(s) | 61, 391, 524 |
| AsuC2I | CCSGG | 2 cut(s) | 344, 417 |
| AsuHPI | GGTGA | 3 cut(s) | 277, 389, 464 |
| AsuII | TTCGAA | 1 cut(s) | 310 |
| BaeGI | GKGCMC | 2 cut(s) | 245, 319 |
| BalI | TGGCCA | 1 cut(s) | 498 |
| BbsI | GAAGAC | 1 cut(s) | 427 |
| Bbv12I | GWGCWC | 2 cut(s) | 245, 319 |
| BbvI | GCAGC | 2 cut(s) | 48, 403 |
| BccI | CCATC | 1 cut(s) | 274 |
| BcnI | CCSGG | 2 cut(s) | 344, 417 |
| BfaI | CTAG | 2 cut(s) | 219, 366 |
| BfmI | CTRYAG | 1 cut(s) | 522 |
| BfuAI | ACCTGC | 1 cut(s) | 501 |
| BisI | GCNGC | 3 cut(s) | 62, 392, 525 |
| BlsI | GCNGC | 3 cut(s) | 63, 393, 526 |
| Bme1390I | CCNGG | 2 cut(s) | 344, 417 |
| BmrFI | CCNGG | 2 cut(s) | 344, 417 |
| BmrI | ACTGGG | 1 cut(s) | 201 |
| BmsI | GCATC | 2 cut(s) | 24, 41 |
| BmuI | ACTGGG | 1 cut(s) | 201 |
| BpiI | GAAGAC | 1 cut(s) | 427 |
| Bpu10I | CCTNAGC | 1 cut(s) | 156 |
| Bpu14I | TTCGAA | 1 cut(s) | 310 |
| BpuEI | CTTGAG | 2 cut(s) | 182, 223 |
| BpuMI | CCSGG | 2 cut(s) | 344, 417 |
| Bse1I | ACTGG | 2 cut(s) | 196, 338 |
| Bse3DI | GCAATG | 2 cut(s) | 262, 479 |
| BseMI | GCAATG | 2 cut(s) | 262, 479 |
| BseMII | CTCAG | 1 cut(s) | 267 |
| BseNI | ACTGG | 2 cut(s) | 196, 338 |
| BseSI | GKGCMC | 2 cut(s) | 245, 319 |
| BseXI | GCAGC | 2 cut(s) | 48, 403 |
| BshFI | GGCC | 3 cut(s) | 122, 461, 498 |
| BsiHKAI | GWGCWC | 2 cut(s) | 245, 319 |
| BsiSI | CCGG | 2 cut(s) | 344, 417 |
| BslFI | GGGAC | 1 cut(s) | 326 |
| BsmFI | GGGAC | 1 cut(s) | 326 |
| BsnI | GGCC | 3 cut(s) | 122, 461, 498 |
| Bsp119I | TTCGAA | 1 cut(s) | 310 |
| Bsp1286I | GDGCHC | 2 cut(s) | 245, 319 |
| Bsp143I | GATC | 2 cut(s) | 346, 438 |
| BspANI | GGCC | 3 cut(s) | 122, 461, 498 |
| BspCNI | CTCAG | 1 cut(s) | 268 |
| BspHI | TCATGA | 1 cut(s) | 109 |
| BspMAI | CTGCAG | 1 cut(s) | 526 |
| BspMI | ACCTGC | 1 cut(s) | 501 |
| BspPI | GGATC | 2 cut(s) | 354, 446 |
| BspT104I | TTCGAA | 1 cut(s) | 310 |
| BsrDI | GCAATG | 2 cut(s) | 262, 479 |
| BsrI | ACTGG | 2 cut(s) | 196, 338 |
| BssMI | GATC | 2 cut(s) | 346, 438 |
| Bst6I | CTCTTC | 1 cut(s) | 450 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 516 |
| BstBI | TTCGAA | 1 cut(s) | 310 |
| BstDEI | CTNAG | 2 cut(s) | 156, 276 |
| BstKTI | GATC | 2 cut(s) | 349, 441 |
| BstMBI | GATC | 2 cut(s) | 346, 438 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 516 |
| BstNSI | RCATGY | 1 cut(s) | 58 |
| BstSCI | CCNGG | 2 cut(s) | 342, 415 |
| BstSFI | CTRYAG | 1 cut(s) | 522 |
| BstSLI | GKGCMC | 2 cut(s) | 245, 319 |
| BstV1I | GCAGC | 2 cut(s) | 48, 403 |
| BstV2I | GAAGAC | 1 cut(s) | 427 |
| BsuRI | GGCC | 3 cut(s) | 122, 461, 498 |
| BtsI | GCAGTG | 1 cut(s) | 519 |
| BtsIMutI | CAGTG | 1 cut(s) | 519 |
| BveI | ACCTGC | 1 cut(s) | 501 |
| CciI | TCATGA | 1 cut(s) | 109 |
| CviAII | CATG | 4 cut(s) | 55, 110, 320, 516 |
| DdeI | CTNAG | 2 cut(s) | 156, 276 |
| DpnI | GATC | 2 cut(s) | 348, 440 |
| DpnII | GATC | 2 cut(s) | 346, 438 |
| EaeI | YGGCCR | 1 cut(s) | 496 |
| Eam1104I | CTCTTC | 1 cut(s) | 450 |
| EarI | CTCTTC | 1 cut(s) | 450 |
| EcoT22I | ATGCAT | 1 cut(s) | 56 |
| FaeI | CATG | 4 cut(s) | 58, 113, 323, 519 |
| FaiI | YATR | 8 cut(s) | 56, 98, 111, 146, 321, 517, 530, 532 |
| FaqI | GGGAC | 1 cut(s) | 326 |
| FatI | CATG | 4 cut(s) | 54, 109, 319, 515 |
| Fnu4HI | GCNGC | 3 cut(s) | 62, 392, 525 |
| Fsp4HI | GCNGC | 3 cut(s) | 62, 392, 525 |
| FspBI | CTAG | 2 cut(s) | 219, 366 |
| GluI | GCNGC | 3 cut(s) | 62, 392, 525 |
| HaeIII | GGCC | 3 cut(s) | 122, 461, 498 |
| HapII | CCGG | 2 cut(s) | 344, 417 |
| Hin1II | CATG | 4 cut(s) | 58, 113, 323, 519 |
| HindIII | AAGCTT | 1 cut(s) | 158 |
| HinfI | GANTC | 3 cut(s) | 125, 207, 380 |
| HpaII | CCGG | 2 cut(s) | 344, 417 |
| HphI | GGTGA | 3 cut(s) | 277, 389, 464 |
| Hpy166II | GTNNAC | 3 cut(s) | 243, 268, 317 |
| Hpy188III | TCNNGA | 3 cut(s) | 91, 110, 350 |
| Hpy8I | GTNNAC | 3 cut(s) | 243, 268, 317 |
| HpyAV | CCTTC | 2 cut(s) | 71, 112 |
| HpyCH4V | TGCA | 7 cut(s) | 54, 243, 317, 391, 472, 519, 524 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 516 |
| HpyF3I | CTNAG | 2 cut(s) | 156, 276 |
| Hsp92II | CATG | 4 cut(s) | 58, 113, 323, 519 |
| Kzo9I | GATC | 2 cut(s) | 346, 438 |
| LpnPI | CCDG | 7 cut(s) | 177, 351, 357, 427, 430, 475, 496 |
| Lsp1109I | GCAGC | 2 cut(s) | 48, 403 |
| LweI | GCATC | 2 cut(s) | 24, 41 |
| MaeI | CTAG | 2 cut(s) | 219, 366 |
| MaeIII | GTNAC | 1 cut(s) | 5 |
| MalI | GATC | 2 cut(s) | 348, 440 |
| MboI | GATC | 2 cut(s) | 346, 438 |
| MboII | GAAGA | 3 cut(s) | 120, 432, 467 |
| MhlI | GDGCHC | 2 cut(s) | 245, 319 |
| MlsI | TGGCCA | 1 cut(s) | 498 |
| MluCI | AATT | 1 cut(s) | 68 |
| MluNI | TGGCCA | 1 cut(s) | 498 |
| MlyI | GAGTC | 1 cut(s) | 216 |
| MmeI | TCCRAC | 1 cut(s) | 165 |
| MnlI | CCTC | 7 cut(s) | 75, 132, 241, 405, 423, 429, 451 |
| Mox20I | TGGCCA | 1 cut(s) | 498 |
| Mph1103I | ATGCAT | 1 cut(s) | 56 |
| MscI | TGGCCA | 1 cut(s) | 498 |
| Msp20I | TGGCCA | 1 cut(s) | 498 |
| MspI | CCGG | 2 cut(s) | 344, 417 |
| MspR9I | CCNGG | 2 cut(s) | 344, 417 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 516 |
| NciI | CCSGG | 2 cut(s) | 344, 417 |
| NdeII | GATC | 2 cut(s) | 346, 438 |
| NlaIII | CATG | 4 cut(s) | 58, 113, 323, 519 |
| NsiI | ATGCAT | 1 cut(s) | 56 |
| NspI | RCATGY | 1 cut(s) | 58 |
| NspV | TTCGAA | 1 cut(s) | 310 |
| PagI | TCATGA | 1 cut(s) | 109 |
| PfeI | GAWTC | 2 cut(s) | 125, 380 |
| PfoI | TCCNGGA | 2 cut(s) | 342, 415 |
| PkrI | GCNGC | 3 cut(s) | 63, 393, 526 |
| PleI | GAGTC | 1 cut(s) | 215 |
| PpsI | GAGTC | 1 cut(s) | 215 |
| PstI | CTGCAG | 1 cut(s) | 526 |
| SatI | GCNGC | 3 cut(s) | 62, 392, 525 |
| Sau3AI | GATC | 2 cut(s) | 346, 438 |
| SchI | GAGTC | 1 cut(s) | 216 |
| ScrFI | CCNGG | 2 cut(s) | 344, 417 |
| SduI | GDGCHC | 2 cut(s) | 245, 319 |
| SetI | ASST | 9 cut(s) | 143, 162, 174, 185, 331, 415, 446, 515, 529 |
| SfaNI | GCATC | 2 cut(s) | 24, 41 |
| SfcI | CTRYAG | 1 cut(s) | 522 |
| SfuI | TTCGAA | 1 cut(s) | 310 |
| SmlI | CTYRAG | 2 cut(s) | 161, 202 |
| SmoI | CTYRAG | 2 cut(s) | 161, 202 |
| Sse9I | AATT | 1 cut(s) | 68 |
| SspMI | CTAG | 2 cut(s) | 219, 366 |
| StyD4I | CCNGG | 2 cut(s) | 342, 415 |
| TaqI | TCGA | 3 cut(s) | 176, 310, 406 |
| TasI | AATT | 1 cut(s) | 68 |
| TfiI | GAWTC | 2 cut(s) | 125, 380 |
| TscAI | CASTG | 1 cut(s) | 526 |
| TseI | GCWGC | 3 cut(s) | 61, 391, 524 |
| TspDTI | ATGAA | 3 cut(s) | 98, 113, 126 |
| TspRI | CASTG | 1 cut(s) | 526 |
| VneI | GTGCAC | 2 cut(s) | 241, 315 |
| XceI | RCATGY | 1 cut(s) | 58 |
| XspI | CTAG | 2 cut(s) | 219, 366 |
| Zsp2I | ATGCAT | 1 cut(s) | 56 |