MuDR family transposase
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 1313 |
| AciI | CCGC | 1 cut(s) | 1328 |
| AclI | AACGTT | 1 cut(s) | 955 |
| AclWI | GGATC | 6 cut(s) | 22, 71, 414, 620, 865, 1294 |
| AcsI | RAATTY | 2 cut(s) | 143, 266 |
| AcuI | CTGAAG | 1 cut(s) | 375 |
| AcyI | GRCGYC | 1 cut(s) | 1342 |
| AfaI | GTAC | 3 cut(s) | 313, 749, 1235 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 997 |
| AgsI | TTSAA | 3 cut(s) | 460, 1012, 1225 |
| AhlI | ACTAGT | 1 cut(s) | 1168 |
| AjnI | CCWGG | 2 cut(s) | 497, 598 |
| AluBI | AGCT | 3 cut(s) | 263, 883, 931 |
| AluI | AGCT | 3 cut(s) | 263, 883, 931 |
| Alw21I | GWGCWC | 2 cut(s) | 890, 1162 |
| Alw26I | GTCTC | 4 cut(s) | 210, 353, 487, 1269 |
| Alw44I | GTGCAC | 1 cut(s) | 886 |
| AlwI | GGATC | 6 cut(s) | 22, 71, 414, 620, 865, 1294 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 25 |
| AoxI | GGCC | 1 cut(s) | 495 |
| ApaLI | GTGCAC | 1 cut(s) | 886 |
| ApeKI | GCWGC | 2 cut(s) | 19, 260 |
| ApoI | RAATTY | 2 cut(s) | 143, 266 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 457, 489 |
| AseI | ATTAAT | 2 cut(s) | 45, 228 |
| AsuHPI | GGTGA | 3 cut(s) | 63, 548, 845 |
| AxyI | CCTNAGG | 1 cut(s) | 792 |
| BaeGI | GKGCMC | 1 cut(s) | 890 |
| Bbv12I | GWGCWC | 2 cut(s) | 890, 1162 |
| BbvI | GCAGC | 2 cut(s) | 31, 272 |
| BccI | CCATC | 9 cut(s) | 109, 295, 433, 684, 767, 908, 937, 991, 1090 |
| BciT130I | CCWGG | 2 cut(s) | 499, 600 |
| BciVI | GTATCC | 1 cut(s) | 300 |
| BclI | TGATCA | 1 cut(s) | 12 |
| BcoDI | GTCTC | 4 cut(s) | 210, 353, 487, 1269 |
| BcuI | ACTAGT | 1 cut(s) | 1168 |
| BfaI | CTAG | 2 cut(s) | 1056, 1169 |
| BfmI | CTRYAG | 1 cut(s) | 1030 |
| BfuI | GTATCC | 1 cut(s) | 300 |
| BisI | GCNGC | 2 cut(s) | 20, 261 |
| BlsI | GCNGC | 2 cut(s) | 21, 262 |
| Bme1390I | CCNGG | 2 cut(s) | 499, 600 |
| BmrFI | CCNGG | 2 cut(s) | 499, 600 |
| BmrI | ACTGGG | 1 cut(s) | 774 |
| BmsI | GCATC | 3 cut(s) | 568, 927, 1281 |
| BmuI | ACTGGG | 1 cut(s) | 774 |
| BpmI | CTGGAG | 1 cut(s) | 198 |
| BpuEI | CTTGAG | 1 cut(s) | 192 |
| Bsa29I | ATCGAT | 2 cut(s) | 822, 826 |
| BsaBI | GATNNNNATC | 1 cut(s) | 777 |
| BsaHI | GRCGYC | 1 cut(s) | 1342 |
| BsaJI | CCNNGG | 1 cut(s) | 599 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 788, 818 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 997 |
| Bse1I | ACTGG | 2 cut(s) | 519, 769 |
| Bse21I | CCTNAGG | 1 cut(s) | 792 |
| Bse3DI | GCAATG | 1 cut(s) | 199 |
| Bse8I | GATNNNNATC | 1 cut(s) | 777 |
| BseBI | CCWGG | 2 cut(s) | 499, 600 |
| BseCI | ATCGAT | 2 cut(s) | 822, 826 |
| BseDI | CCNNGG | 1 cut(s) | 599 |
| BseGI | GGATG | 1 cut(s) | 787 |
| BseJI | GATNNNNATC | 1 cut(s) | 777 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 997 |
| BseMI | GCAATG | 1 cut(s) | 199 |
| BseMII | CTCAG | 1 cut(s) | 984 |
| BseNI | ACTGG | 2 cut(s) | 519, 769 |
| BseSI | GKGCMC | 1 cut(s) | 890 |
| BseXI | GCAGC | 2 cut(s) | 31, 272 |
| BsgI | GTGCAG | 3 cut(s) | 17, 279, 715 |
| Bsh1285I | CGRYCG | 1 cut(s) | 826 |
| BshFI | GGCC | 1 cut(s) | 497 |
| BshVI | ATCGAT | 2 cut(s) | 822, 826 |
| BsiEI | CGRYCG | 1 cut(s) | 826 |
| BsiHKAI | GWGCWC | 2 cut(s) | 890, 1162 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 997 |
| BsmAI | GTCTC | 4 cut(s) | 210, 353, 487, 1269 |
| BsnI | GGCC | 1 cut(s) | 497 |
| Bsp1286I | GDGCHC | 2 cut(s) | 890, 1162 |
| BspACI | CCGC | 1 cut(s) | 1328 |
| BspANI | GGCC | 1 cut(s) | 497 |
| BspCNI | CTCAG | 1 cut(s) | 985 |
| BspDI | ATCGAT | 2 cut(s) | 822, 826 |
| BspHI | TCATGA | 1 cut(s) | 1129 |
| BspPI | GGATC | 6 cut(s) | 22, 71, 414, 620, 865, 1294 |
| BsrDI | GCAATG | 1 cut(s) | 199 |
| BsrI | ACTGG | 2 cut(s) | 519, 769 |
| BssECI | CCNNGG | 1 cut(s) | 599 |
| BssNI | GRCGYC | 1 cut(s) | 1342 |
| Bst2UI | CCWGG | 2 cut(s) | 499, 600 |
| Bst4CI | ACNGT | 2 cut(s) | 529, 611 |
| Bst6I | CTCTTC | 1 cut(s) | 351 |
| BstACI | GRCGYC | 1 cut(s) | 1342 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1172 |
| BstC8I | GCNNGC | 2 cut(s) | 673, 1332 |
| BstDEI | CTNAG | 4 cut(s) | 519, 792, 993, 1335 |
| BstF5I | GGATG | 1 cut(s) | 787 |
| BstMAI | GTCTC | 4 cut(s) | 210, 353, 487, 1269 |
| BstMCI | CGRYCG | 1 cut(s) | 826 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 503, 944, 1172 |
| BstNI | CCWGG | 2 cut(s) | 499, 600 |
| BstSCI | CCNGG | 2 cut(s) | 497, 598 |
| BstSFI | CTRYAG | 1 cut(s) | 1030 |
| BstSLI | GKGCMC | 1 cut(s) | 890 |
| BstV1I | GCAGC | 2 cut(s) | 31, 272 |
| BstX2I | RGATCY | 1 cut(s) | 1299 |
| BstYI | RGATCY | 1 cut(s) | 1299 |
| Bsu15I | ATCGAT | 2 cut(s) | 822, 826 |
| Bsu36I | CCTNAGG | 1 cut(s) | 792 |
| BsuI | GTATCC | 1 cut(s) | 300 |
| BsuRI | GGCC | 1 cut(s) | 497 |
| BsuTUI | ATCGAT | 2 cut(s) | 822, 826 |
| BtsCI | GGATG | 1 cut(s) | 787 |
| BtsI | GCAGTG | 1 cut(s) | 34 |
| BtsIMutI | CAGTG | 2 cut(s) | 34, 607 |
| Cac8I | GCNNGC | 2 cut(s) | 673, 1332 |
| CaiI | CAGNNNCTG | 1 cut(s) | 25 |
| CciI | TCATGA | 1 cut(s) | 1129 |
| ClaI | ATCGAT | 2 cut(s) | 822, 826 |
| CseI | GACGC | 1 cut(s) | 1331 |
| Csp6I | GTAC | 3 cut(s) | 312, 748, 1234 |
| CviJI | RGCY | 9 cut(s) | 22, 263, 497, 518, 883, 931, 947, 1046, 1149 |
| CviKI_1 | RGCY | 9 cut(s) | 22, 263, 497, 518, 883, 931, 947, 1046, 1149 |
| CviQI | GTAC | 3 cut(s) | 312, 748, 1234 |
| DdeI | CTNAG | 4 cut(s) | 519, 792, 993, 1335 |
| DraI | TTTAAA | 1 cut(s) | 318 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1313 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1313 |
| Eam1104I | CTCTTC | 1 cut(s) | 351 |
| EarI | CTCTTC | 1 cut(s) | 351 |
| Eco147I | AGGCCT | 1 cut(s) | 497 |
| Eco57I | CTGAAG | 1 cut(s) | 375 |
| Eco81I | CCTNAGG | 1 cut(s) | 792 |
| EcoRII | CCWGG | 2 cut(s) | 497, 598 |
| EcoT22I | ATGCAT | 3 cut(s) | 131, 199, 1296 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 278, 310 |
| FauNDI | CATATG | 1 cut(s) | 1249 |
| FbaI | TGATCA | 1 cut(s) | 12 |
| Fnu4HI | GCNGC | 2 cut(s) | 20, 261 |
| FokI | GGATG | 1 cut(s) | 774 |
| Fsp4HI | GCNGC | 2 cut(s) | 20, 261 |
| FspBI | CTAG | 2 cut(s) | 1056, 1169 |
| GluI | GCNGC | 2 cut(s) | 20, 261 |
| GsuI | CTGGAG | 1 cut(s) | 198 |
| HaeIII | GGCC | 1 cut(s) | 497 |
| HgaI | GACGC | 1 cut(s) | 1331 |
| Hin1I | GRCGYC | 1 cut(s) | 1342 |
| HincII | GTYRAC | 1 cut(s) | 372 |
| HindII | GTYRAC | 1 cut(s) | 372 |
| HinfI | GANTC | 2 cut(s) | 306, 542 |
| HphI | GGTGA | 3 cut(s) | 63, 548, 845 |
| Hpy166II | GTNNAC | 3 cut(s) | 328, 372, 888 |
| Hpy188I | TCNGA | 4 cut(s) | 12, 27, 91, 648 |
| Hpy188III | TCNNGA | 6 cut(s) | 177, 476, 727, 782, 855, 1130 |
| Hpy8I | GTNNAC | 3 cut(s) | 328, 372, 888 |
| HpyAV | CCTTC | 3 cut(s) | 182, 211, 1036 |
| HpyCH4III | ACNGT | 2 cut(s) | 529, 611 |
| HpyCH4IV | ACGT | 1 cut(s) | 955 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 503, 944, 1172 |
| HpyF3I | CTNAG | 4 cut(s) | 519, 792, 993, 1335 |
| HpySE526I | ACGT | 1 cut(s) | 955 |
| Hsp92I | GRCGYC | 1 cut(s) | 1342 |
| Ksp22I | TGATCA | 1 cut(s) | 12 |
| Lsp1109I | GCAGC | 2 cut(s) | 31, 272 |
| LweI | GCATC | 3 cut(s) | 568, 927, 1281 |
| MaeI | CTAG | 2 cut(s) | 1056, 1169 |
| MaeII | ACGT | 1 cut(s) | 955 |
| MaeIII | GTNAC | 2 cut(s) | 272, 842 |
| MboII | GAAGA | 3 cut(s) | 368, 384, 861 |
| MfeI | CAATTG | 1 cut(s) | 438 |
| MflI | RGATCY | 1 cut(s) | 1299 |
| MhlI | GDGCHC | 2 cut(s) | 890, 1162 |
| MluCI | AATT | 9 cut(s) | 42, 143, 266, 384, 438, 560, 753, 799, 1036 |
| MmeI | TCCRAC | 1 cut(s) | 194 |
| MnlI | CCTC | 8 cut(s) | 33, 244, 557, 649, 961, 1066, 1332, 1335 |
| Mph1103I | ATGCAT | 3 cut(s) | 131, 199, 1296 |
| MseI | TTAA | 9 cut(s) | 45, 228, 317, 432, 450, 752, 812, 927, 1281 |
| MslI | CAYNNNNRTG | 1 cut(s) | 537 |
| MspA1I | CMGCKG | 1 cut(s) | 263 |
| MspR9I | CCNGG | 2 cut(s) | 499, 600 |
| MunI | CAATTG | 1 cut(s) | 438 |
| MvaI | CCWGG | 2 cut(s) | 499, 600 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 503, 944, 1172 |
| NdeI | CATATG | 1 cut(s) | 1249 |
| NsiI | ATGCAT | 3 cut(s) | 131, 199, 1296 |
| PagI | TCATGA | 1 cut(s) | 1129 |
| PceI | AGGCCT | 1 cut(s) | 497 |
| PfeI | GAWTC | 2 cut(s) | 306, 542 |
| PkrI | GCNGC | 2 cut(s) | 21, 262 |
| Ple19I | CGATCG | 1 cut(s) | 826 |
| PshBI | ATTAAT | 2 cut(s) | 45, 228 |
| Psp1406I | AACGTT | 1 cut(s) | 955 |
| Psp6I | CCWGG | 2 cut(s) | 497, 598 |
| PspGI | CCWGG | 2 cut(s) | 497, 598 |
| PstNI | CAGNNNCTG | 1 cut(s) | 25 |
| PsuI | RGATCY | 1 cut(s) | 1299 |
| PvuI | CGATCG | 1 cut(s) | 826 |
| PvuII | CAGCTG | 1 cut(s) | 263 |
| RsaI | GTAC | 3 cut(s) | 313, 749, 1235 |
| RsaNI | GTAC | 3 cut(s) | 312, 748, 1234 |
| RseI | CAYNNNNRTG | 1 cut(s) | 537 |
| SaqAI | TTAA | 9 cut(s) | 45, 228, 317, 432, 450, 752, 812, 927, 1281 |
| SatI | GCNGC | 2 cut(s) | 20, 261 |
| ScrFI | CCNGG | 2 cut(s) | 499, 600 |
| SduI | GDGCHC | 2 cut(s) | 890, 1162 |
| SfaNI | GCATC | 3 cut(s) | 568, 927, 1281 |
| SfcI | CTRYAG | 1 cut(s) | 1030 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 537 |
| SmlI | CTYRAG | 1 cut(s) | 207 |
| SmoI | CTYRAG | 1 cut(s) | 207 |
| SpeI | ACTAGT | 1 cut(s) | 1168 |
| Sse9I | AATT | 9 cut(s) | 42, 143, 266, 384, 438, 560, 753, 799, 1036 |
| SseBI | AGGCCT | 1 cut(s) | 497 |
| SsiI | CCGC | 1 cut(s) | 1328 |
| SspI | AATATT | 1 cut(s) | 1088 |
| SspMI | CTAG | 2 cut(s) | 1056, 1169 |
| StuI | AGGCCT | 1 cut(s) | 497 |
| StyD4I | CCNGG | 2 cut(s) | 497, 598 |
| TaaI | ACNGT | 2 cut(s) | 529, 611 |
| TaiI | ACGT | 1 cut(s) | 958 |
| TaqI | TCGA | 6 cut(s) | 380, 688, 822, 826, 872, 1101 |
| TasI | AATT | 9 cut(s) | 42, 143, 266, 384, 438, 560, 753, 799, 1036 |
| TfiI | GAWTC | 2 cut(s) | 306, 542 |
| Tru1I | TTAA | 9 cut(s) | 45, 228, 317, 432, 450, 752, 812, 927, 1281 |
| Tru9I | TTAA | 9 cut(s) | 45, 228, 317, 432, 450, 752, 812, 927, 1281 |
| TscAI | CASTG | 2 cut(s) | 41, 614 |
| TseI | GCWGC | 2 cut(s) | 19, 260 |
| TspGWI | ACGGA | 2 cut(s) | 299, 404 |
| TspRI | CASTG | 2 cut(s) | 41, 614 |
| VneI | GTGCAC | 1 cut(s) | 886 |
| VspI | ATTAAT | 2 cut(s) | 45, 228 |
| XapI | RAATTY | 2 cut(s) | 143, 266 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 911 |
| XspI | CTAG | 2 cut(s) | 1056, 1169 |
| Zsp2I | ATGCAT | 3 cut(s) | 131, 199, 1296 |