isoform X1
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 525 |
| AclWI | GGATC | 2 cut(s) | 553, 788 |
| AcsI | RAATTY | 2 cut(s) | 419, 516 |
| AcuI | CTGAAG | 1 cut(s) | 378 |
| AfaI | GTAC | 1 cut(s) | 656 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 343 |
| AflIII | ACRYGT | 1 cut(s) | 563 |
| AjnI | CCWGG | 2 cut(s) | 154, 765 |
| Alw21I | GWGCWC | 1 cut(s) | 29 |
| Alw26I | GTCTC | 2 cut(s) | 441, 752 |
| Alw44I | GTGCAC | 1 cut(s) | 25 |
| AlwI | GGATC | 2 cut(s) | 553, 788 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 202 |
| ApaLI | GTGCAC | 1 cut(s) | 25 |
| ApeKI | GCWGC | 2 cut(s) | 273, 838 |
| ApoI | RAATTY | 2 cut(s) | 419, 516 |
| AseI | ATTAAT | 1 cut(s) | 60 |
| AspLEI | GCGC | 2 cut(s) | 164, 526 |
| BaeGI | GKGCMC | 1 cut(s) | 29 |
| Bbv12I | GWGCWC | 1 cut(s) | 29 |
| BbvI | GCAGC | 2 cut(s) | 285, 825 |
| BccI | CCATC | 2 cut(s) | 122, 805 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 404, 438 |
| BciT130I | CCWGG | 2 cut(s) | 156, 767 |
| BcoDI | GTCTC | 2 cut(s) | 441, 752 |
| BfaI | CTAG | 3 cut(s) | 393, 687, 827 |
| BisI | GCNGC | 2 cut(s) | 274, 839 |
| BlsI | GCNGC | 2 cut(s) | 275, 840 |
| Bme1390I | CCNGG | 2 cut(s) | 156, 767 |
| BmiI | GGNNCC | 1 cut(s) | 433 |
| BmrFI | CCNGG | 2 cut(s) | 156, 767 |
| BmsI | GCATC | 2 cut(s) | 149, 189 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 64, 96, 438, 470 |
| BsaJI | CCNNGG | 3 cut(s) | 12, 605, 766 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 343 |
| Bse3DI | GCAATG | 1 cut(s) | 187 |
| BseBI | CCWGG | 2 cut(s) | 156, 767 |
| BseDI | CCNNGG | 3 cut(s) | 12, 605, 766 |
| BseGI | GGATG | 2 cut(s) | 164, 328 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 343 |
| BseMI | GCAATG | 1 cut(s) | 187 |
| BseMII | CTCAG | 3 cut(s) | 333, 429, 469 |
| BseSI | GKGCMC | 1 cut(s) | 29 |
| BseXI | GCAGC | 2 cut(s) | 285, 825 |
| BsiHKAI | GWGCWC | 1 cut(s) | 29 |
| BslFI | GGGAC | 1 cut(s) | 524 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 343 |
| BsmAI | GTCTC | 2 cut(s) | 441, 752 |
| BsmFI | GGGAC | 1 cut(s) | 524 |
| BsmI | GAATGC | 1 cut(s) | 841 |
| Bsp1286I | GDGCHC | 1 cut(s) | 29 |
| Bsp143I | GATC | 2 cut(s) | 545, 793 |
| BspCNI | CTCAG | 3 cut(s) | 334, 430, 468 |
| BspLI | GGNNCC | 1 cut(s) | 433 |
| BspPI | GGATC | 2 cut(s) | 553, 788 |
| BsrDI | GCAATG | 1 cut(s) | 187 |
| BssECI | CCNNGG | 3 cut(s) | 12, 605, 766 |
| BssMI | GATC | 2 cut(s) | 545, 793 |
| BssT1I | CCWWGG | 1 cut(s) | 12 |
| Bst2UI | CCWGG | 2 cut(s) | 156, 767 |
| Bst4CI | ACNGT | 2 cut(s) | 250, 704 |
| Bst6I | CTCTTC | 1 cut(s) | 567 |
| BstC8I | GCNNGC | 2 cut(s) | 832, 836 |
| BstDEI | CTNAG | 4 cut(s) | 342, 438, 455, 708 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 341 |
| BstF5I | GGATG | 2 cut(s) | 164, 328 |
| BstHHI | GCGC | 2 cut(s) | 164, 526 |
| BstKTI | GATC | 2 cut(s) | 548, 796 |
| BstMAI | GTCTC | 2 cut(s) | 441, 752 |
| BstMBI | GATC | 2 cut(s) | 545, 793 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 671, 847 |
| BstNI | CCWGG | 2 cut(s) | 156, 767 |
| BstNSI | RCATGY | 3 cut(s) | 567, 730, 834 |
| BstSCI | CCNGG | 2 cut(s) | 154, 765 |
| BstSLI | GKGCMC | 1 cut(s) | 29 |
| BstV1I | GCAGC | 2 cut(s) | 285, 825 |
| BtsCI | GGATG | 2 cut(s) | 164, 328 |
| BtsI | GCAGTG | 1 cut(s) | 217 |
| BtsIMutI | CAGTG | 2 cut(s) | 217, 339 |
| Cac8I | GCNNGC | 2 cut(s) | 832, 836 |
| CaiI | CAGNNNCTG | 1 cut(s) | 202 |
| CfoI | GCGC | 2 cut(s) | 164, 526 |
| Csp6I | GTAC | 1 cut(s) | 655 |
| CviAII | CATG | 6 cut(s) | 49, 521, 533, 564, 727, 831 |
| CviQI | GTAC | 1 cut(s) | 655 |
| DdeI | CTNAG | 4 cut(s) | 342, 438, 455, 708 |
| DpnI | GATC | 2 cut(s) | 547, 795 |
| DpnII | GATC | 2 cut(s) | 545, 793 |
| Eam1104I | CTCTTC | 1 cut(s) | 567 |
| EarI | CTCTTC | 1 cut(s) | 567 |
| Eco130I | CCWWGG | 1 cut(s) | 12 |
| Eco57I | CTGAAG | 1 cut(s) | 378 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 341 |
| EcoRI | GAATTC | 1 cut(s) | 516 |
| EcoRII | CCWGG | 2 cut(s) | 154, 765 |
| EcoT14I | CCWWGG | 1 cut(s) | 12 |
| ErhI | CCWWGG | 1 cut(s) | 12 |
| FaeI | CATG | 6 cut(s) | 52, 524, 536, 567, 730, 834 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 359, 391 |
| FaqI | GGGAC | 1 cut(s) | 524 |
| FatI | CATG | 6 cut(s) | 48, 520, 532, 563, 726, 830 |
| Fnu4HI | GCNGC | 2 cut(s) | 274, 839 |
| FokI | GGATG | 2 cut(s) | 171, 335 |
| Fsp4HI | GCNGC | 2 cut(s) | 274, 839 |
| FspBI | CTAG | 3 cut(s) | 393, 687, 827 |
| FspI | TGCGCA | 1 cut(s) | 525 |
| GlaI | GCGC | 2 cut(s) | 163, 525 |
| GluI | GCNGC | 2 cut(s) | 274, 839 |
| HhaI | GCGC | 2 cut(s) | 164, 526 |
| Hin1II | CATG | 6 cut(s) | 52, 524, 536, 567, 730, 834 |
| Hin6I | GCGC | 2 cut(s) | 162, 524 |
| HinP1I | GCGC | 2 cut(s) | 162, 524 |
| HindIII | AAGCTT | 2 cut(s) | 137, 282 |
| HinfI | GANTC | 1 cut(s) | 716 |
| Hpy166II | GTNNAC | 1 cut(s) | 27 |
| Hpy188I | TCNGA | 2 cut(s) | 458, 816 |
| Hpy188III | TCNNGA | 4 cut(s) | 36, 196, 446, 559 |
| Hpy8I | GTNNAC | 1 cut(s) | 27 |
| HpyAV | CCTTC | 1 cut(s) | 676 |
| HpyCH4III | ACNGT | 2 cut(s) | 250, 704 |
| HpyCH4V | TGCA | 5 cut(s) | 27, 122, 273, 834, 841 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 671, 847 |
| HpyF3I | CTNAG | 4 cut(s) | 342, 438, 455, 708 |
| Hsp92II | CATG | 6 cut(s) | 52, 524, 536, 567, 730, 834 |
| HspAI | GCGC | 2 cut(s) | 162, 524 |
| Kzo9I | GATC | 2 cut(s) | 545, 793 |
| Lsp1109I | GCAGC | 2 cut(s) | 285, 825 |
| LweI | GCATC | 2 cut(s) | 149, 189 |
| MaeI | CTAG | 3 cut(s) | 393, 687, 827 |
| MaeIII | GTNAC | 1 cut(s) | 395 |
| MalI | GATC | 2 cut(s) | 547, 795 |
| MboI | GATC | 2 cut(s) | 545, 793 |
| MboII | GAAGA | 5 cut(s) | 167, 268, 311, 338, 584 |
| MhlI | GDGCHC | 1 cut(s) | 29 |
| MluCI | AATT | 4 cut(s) | 419, 516, 552, 612 |
| MmeI | TCCRAC | 1 cut(s) | 210 |
| MnlI | CCTC | 5 cut(s) | 337, 347, 568, 600, 810 |
| MseI | TTAA | 4 cut(s) | 21, 60, 135, 723 |
| MspR9I | CCNGG | 2 cut(s) | 156, 767 |
| Mva1269I | GAATGC | 1 cut(s) | 841 |
| MvaI | CCWGG | 2 cut(s) | 156, 767 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 671, 847 |
| NdeII | GATC | 2 cut(s) | 545, 793 |
| NlaIII | CATG | 6 cut(s) | 52, 524, 536, 567, 730, 834 |
| NlaIV | GGNNCC | 1 cut(s) | 433 |
| NmeAIII | GCCGAG | 1 cut(s) | 630 |
| NsbI | TGCGCA | 1 cut(s) | 525 |
| NspI | RCATGY | 3 cut(s) | 567, 730, 834 |
| PaeI | GCATGC | 1 cut(s) | 834 |
| PciI | ACATGT | 1 cut(s) | 563 |
| PctI | GAATGC | 1 cut(s) | 841 |
| PfeI | GAWTC | 1 cut(s) | 716 |
| PfoI | TCCNGGA | 1 cut(s) | 154 |
| PkrI | GCNGC | 2 cut(s) | 275, 840 |
| PscI | ACATGT | 1 cut(s) | 563 |
| PshBI | ATTAAT | 1 cut(s) | 60 |
| Psp6I | CCWGG | 2 cut(s) | 154, 765 |
| PspGI | CCWGG | 2 cut(s) | 154, 765 |
| PspN4I | GGNNCC | 1 cut(s) | 433 |
| PstNI | CAGNNNCTG | 1 cut(s) | 202 |
| RsaI | GTAC | 1 cut(s) | 656 |
| RsaNI | GTAC | 1 cut(s) | 655 |
| SaqAI | TTAA | 4 cut(s) | 21, 60, 135, 723 |
| SatI | GCNGC | 2 cut(s) | 274, 839 |
| Sau3AI | GATC | 2 cut(s) | 545, 793 |
| ScrFI | CCNGG | 2 cut(s) | 156, 767 |
| SduI | GDGCHC | 1 cut(s) | 29 |
| SfaNI | GCATC | 2 cut(s) | 149, 189 |
| SphI | GCATGC | 1 cut(s) | 834 |
| Sse9I | AATT | 4 cut(s) | 419, 516, 552, 612 |
| SspMI | CTAG | 3 cut(s) | 393, 687, 827 |
| StyD4I | CCNGG | 2 cut(s) | 154, 765 |
| StyI | CCWWGG | 1 cut(s) | 12 |
| TaaI | ACNGT | 2 cut(s) | 250, 704 |
| TaqI | TCGA | 2 cut(s) | 445, 800 |
| TasI | AATT | 4 cut(s) | 419, 516, 552, 612 |
| TfiI | GAWTC | 1 cut(s) | 716 |
| Tru1I | TTAA | 4 cut(s) | 21, 60, 135, 723 |
| Tru9I | TTAA | 4 cut(s) | 21, 60, 135, 723 |
| TscAI | CASTG | 2 cut(s) | 217, 346 |
| TseI | GCWGC | 2 cut(s) | 273, 838 |
| TspDTI | ATGAA | 5 cut(s) | 37, 131, 282, 339, 509 |
| TspRI | CASTG | 2 cut(s) | 217, 346 |
| VneI | GTGCAC | 1 cut(s) | 25 |
| VspI | ATTAAT | 1 cut(s) | 60 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 341 |
| XapI | RAATTY | 2 cut(s) | 419, 516 |
| XceI | RCATGY | 3 cut(s) | 567, 730, 834 |
| XspI | CTAG | 3 cut(s) | 393, 687, 827 |