isoform X1
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Nramp | PF01566 | 96 - 457 | 1.3e-113 | Natural resistance-associated macrophage protein-like |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 108 |
| Acc36I | ACCTGC | 1 cut(s) | 1004 |
| AccB1I | GGYRCC | 2 cut(s) | 408, 1544 |
| AccBSI | CCGCTC | 1 cut(s) | 559 |
| AccI | GTMKAC | 2 cut(s) | 108, 153 |
| AccII | CGCG | 2 cut(s) | 133, 429 |
| AclWI | GGATC | 5 cut(s) | 136, 266, 279, 300, 845 |
| AcoI | YGGCCR | 2 cut(s) | 165, 403 |
| AcsI | RAATTY | 1 cut(s) | 280 |
| AcuI | CTGAAG | 3 cut(s) | 1010, 1271, 1476 |
| AcyI | GRCGYC | 3 cut(s) | 105, 156, 584 |
| AfaI | GTAC | 5 cut(s) | 125, 979, 1284, 1498, 1577 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 15, 213, 405, 412 |
| AgsI | TTSAA | 5 cut(s) | 875, 897, 1165, 1363, 1567 |
| AhlI | ACTAGT | 1 cut(s) | 1003 |
| AjnI | CCWGG | 3 cut(s) | 212, 411, 683 |
| AleI | CACNNNNGTG | 1 cut(s) | 1331 |
| AluBI | AGCT | 8 cut(s) | 31, 223, 373, 421, 478, 753, 989, 1091 |
| AluI | AGCT | 8 cut(s) | 31, 223, 373, 421, 478, 753, 989, 1091 |
| Alw21I | GWGCWC | 3 cut(s) | 423, 462, 576 |
| AlwI | GGATC | 5 cut(s) | 136, 266, 279, 300, 845 |
| Ama87I | CYCGRG | 1 cut(s) | 241 |
| AoxI | GGCC | 8 cut(s) | 165, 238, 345, 358, 381, 403, 447, 564 |
| ApeKI | GCWGC | 4 cut(s) | 373, 1088, 1502, 1539 |
| ApoI | RAATTY | 1 cut(s) | 280 |
| AsiSI | GCGATCGC | 1 cut(s) | 312 |
| AspLEI | GCGC | 1 cut(s) | 8 |
| AspS9I | GGNCC | 9 cut(s) | 196, 239, 345, 358, 367, 382, 447, 564, 1370 |
| AsuC2I | CCSGG | 4 cut(s) | 242, 243, 276, 451 |
| AsuHPI | GGTGA | 2 cut(s) | 637, 1423 |
| AvaI | CYCGRG | 1 cut(s) | 241 |
| AvaII | GGWCC | 3 cut(s) | 196, 367, 1370 |
| BaeGI | GKGCMC | 1 cut(s) | 1549 |
| BamHI | GGATCC | 1 cut(s) | 271 |
| BanI | GGYRCC | 2 cut(s) | 408, 1544 |
| BanII | GRGCYC | 1 cut(s) | 423 |
| BbsI | GAAGAC | 1 cut(s) | 1351 |
| Bbv12I | GWGCWC | 3 cut(s) | 423, 462, 576 |
| BbvCI | CCTCAGC | 1 cut(s) | 1175 |
| BbvI | GCAGC | 4 cut(s) | 360, 1100, 1489, 1551 |
| BccI | CCATC | 1 cut(s) | 1408 |
| BceAI | ACGGC | 2 cut(s) | 597, 1515 |
| BciT130I | CCWGG | 3 cut(s) | 214, 413, 685 |
| BciVI | GTATCC | 1 cut(s) | 447 |
| BclI | TGATCA | 1 cut(s) | 1185 |
| BcnI | CCSGG | 4 cut(s) | 242, 243, 276, 451 |
| BcuI | ACTAGT | 1 cut(s) | 1003 |
| BfaI | CTAG | 1 cut(s) | 1004 |
| BfmI | CTRYAG | 1 cut(s) | 1489 |
| BfoI | RGCGCY | 1 cut(s) | 9 |
| BfuAI | ACCTGC | 1 cut(s) | 1004 |
| BfuI | GTATCC | 1 cut(s) | 447 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 164 |
| BlpI | GCTNAGC | 1 cut(s) | 474 |
| Bme1390I | CCNGG | 7 cut(s) | 214, 242, 243, 276, 413, 451, 685 |
| Bme18I | GGWCC | 3 cut(s) | 196, 367, 1370 |
| BmeT110I | CYCGRG | 1 cut(s) | 241 |
| BmgT120I | GGNCC | 9 cut(s) | 196, 239, 345, 358, 367, 382, 447, 564, 1370 |
| BmiI | GGNNCC | 6 cut(s) | 198, 248, 273, 410, 741, 1546 |
| BmrFI | CCNGG | 7 cut(s) | 214, 242, 243, 276, 413, 451, 685 |
| BmrI | ACTGGG | 1 cut(s) | 1122 |
| BmuI | ACTGGG | 1 cut(s) | 1122 |
| BoxI | GACNNNNGTC | 1 cut(s) | 194 |
| BpiI | GAAGAC | 1 cut(s) | 1351 |
| BpmI | CTGGAG | 1 cut(s) | 281 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1175 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 474 |
| BpuEI | CTTGAG | 2 cut(s) | 632, 739 |
| BpuMI | CCSGG | 4 cut(s) | 242, 243, 276, 451 |
| BsaBI | GATNNNNATC | 2 cut(s) | 146, 1418 |
| BsaHI | GRCGYC | 3 cut(s) | 105, 156, 584 |
| BsaJI | CCNNGG | 7 cut(s) | 45, 241, 242, 275, 354, 388, 963 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 15, 213, 405, 412 |
| Bse118I | RCCGGY | 3 cut(s) | 314, 401, 405 |
| Bse1I | ACTGG | 3 cut(s) | 298, 835, 1117 |
| Bse3DI | GCAATG | 4 cut(s) | 522, 550, 657, 1449 |
| Bse8I | GATNNNNATC | 2 cut(s) | 146, 1418 |
| BseBI | CCWGG | 3 cut(s) | 214, 413, 685 |
| BseDI | CCNNGG | 7 cut(s) | 45, 241, 242, 275, 354, 388, 963 |
| BseGI | GGATG | 2 cut(s) | 693, 1264 |
| BseJI | GATNNNNATC | 2 cut(s) | 146, 1418 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 15, 213, 405, 412 |
| BseMI | GCAATG | 4 cut(s) | 522, 550, 657, 1449 |
| BseMII | CTCAG | 6 cut(s) | 46, 206, 465, 553, 1166, 1236 |
| BseNI | ACTGG | 3 cut(s) | 298, 835, 1117 |
| BseSI | GKGCMC | 1 cut(s) | 1549 |
| BseX3I | CGGCCG | 2 cut(s) | 165, 403 |
| BseXI | GCAGC | 4 cut(s) | 360, 1100, 1489, 1551 |
| BseYI | CCCAGC | 1 cut(s) | 1124 |
| Bsh1236I | CGCG | 2 cut(s) | 133, 429 |
| Bsh1285I | CGRYCG | 3 cut(s) | 168, 312, 406 |
| BshFI | GGCC | 8 cut(s) | 167, 240, 347, 360, 383, 405, 449, 566 |
| BshNI | GGYRCC | 2 cut(s) | 408, 1544 |
| BsiEI | CGRYCG | 3 cut(s) | 168, 312, 406 |
| BsiHKAI | GWGCWC | 3 cut(s) | 423, 462, 576 |
| BsiHKCI | CYCGRG | 1 cut(s) | 241 |
| BsiSI | CCGG | 7 cut(s) | 242, 275, 315, 402, 406, 450, 567 |
| BsiWI | CGTACG | 1 cut(s) | 123 |
| BslFI | GGGAC | 2 cut(s) | 182, 1129 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 15, 213, 405, 412 |
| BsmFI | GGGAC | 2 cut(s) | 182, 1129 |
| BsnI | GGCC | 8 cut(s) | 167, 240, 347, 360, 383, 405, 449, 566 |
| BsoBI | CYCGRG | 1 cut(s) | 241 |
| Bsp1286I | GDGCHC | 4 cut(s) | 423, 462, 576, 1549 |
| Bsp1407I | TGTACA | 1 cut(s) | 1575 |
| Bsp143I | GATC | 8 cut(s) | 141, 147, 271, 292, 309, 850, 1185, 1347 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 474 |
| Bsp19I | CCATGG | 1 cut(s) | 354 |
| BspANI | GGCC | 8 cut(s) | 167, 240, 347, 360, 383, 405, 449, 566 |
| BspCNI | CTCAG | 6 cut(s) | 45, 205, 466, 552, 1167, 1237 |
| BspFNI | CGCG | 2 cut(s) | 133, 429 |
| BspLI | GGNNCC | 6 cut(s) | 198, 248, 273, 410, 741, 1546 |
| BspMI | ACCTGC | 1 cut(s) | 1004 |
| BspPI | GGATC | 5 cut(s) | 136, 266, 279, 300, 845 |
| BspT107I | GGYRCC | 2 cut(s) | 408, 1544 |
| BsrBI | CCGCTC | 1 cut(s) | 559 |
| BsrDI | GCAATG | 4 cut(s) | 522, 550, 657, 1449 |
| BsrFI | RCCGGY | 3 cut(s) | 314, 401, 405 |
| BsrGI | TGTACA | 1 cut(s) | 1575 |
| BsrI | ACTGG | 3 cut(s) | 298, 835, 1117 |
| BssAI | RCCGGY | 3 cut(s) | 314, 401, 405 |
| BssECI | CCNNGG | 7 cut(s) | 45, 241, 242, 275, 354, 388, 963 |
| BssMI | GATC | 8 cut(s) | 141, 147, 271, 292, 309, 850, 1185, 1347 |
| BssNI | GRCGYC | 3 cut(s) | 105, 156, 584 |
| BssT1I | CCWWGG | 3 cut(s) | 45, 354, 963 |
| Bst2UI | CCWGG | 3 cut(s) | 214, 413, 685 |
| Bst4CI | ACNGT | 2 cut(s) | 955, 1399 |
| BstACI | GRCGYC | 3 cut(s) | 105, 156, 584 |
| BstAUI | TGTACA | 1 cut(s) | 1575 |
| BstC8I | GCNNGC | 6 cut(s) | 316, 362, 385, 407, 480, 771 |
| BstDEI | CTNAG | 7 cut(s) | 32, 192, 474, 539, 749, 1175, 1245 |
| BstDSI | CCRYGG | 1 cut(s) | 354 |
| BstF5I | GGATG | 2 cut(s) | 693, 1264 |
| BstFNI | CGCG | 2 cut(s) | 133, 429 |
| BstH2I | RGCGCY | 1 cut(s) | 9 |
| BstHHI | GCGC | 1 cut(s) | 8 |
| BstKTI | GATC | 8 cut(s) | 144, 150, 274, 295, 312, 853, 1188, 1350 |
| BstMBI | GATC | 8 cut(s) | 141, 147, 271, 292, 309, 850, 1185, 1347 |
| BstMCI | CGRYCG | 3 cut(s) | 168, 312, 406 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 164, 370, 479, 668, 1511 |
| BstNI | CCWGG | 3 cut(s) | 214, 413, 685 |
| BstNSI | RCATGY | 1 cut(s) | 44 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 194 |
| BstSCI | CCNGG | 7 cut(s) | 212, 240, 241, 274, 411, 449, 683 |
| BstSFI | CTRYAG | 1 cut(s) | 1489 |
| BstSLI | GKGCMC | 1 cut(s) | 1549 |
| BstUI | CGCG | 2 cut(s) | 133, 429 |
| BstV1I | GCAGC | 4 cut(s) | 360, 1100, 1489, 1551 |
| BstV2I | GAAGAC | 1 cut(s) | 1351 |
| BstX2I | RGATCY | 3 cut(s) | 141, 271, 292 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 355 |
| BstYI | RGATCY | 3 cut(s) | 141, 271, 292 |
| BstZI | CGGCCG | 2 cut(s) | 165, 403 |
| BsuI | GTATCC | 1 cut(s) | 447 |
| BsuRI | GGCC | 8 cut(s) | 167, 240, 347, 360, 383, 405, 449, 566 |
| BtgI | CCRYGG | 1 cut(s) | 354 |
| BtsCI | GGATG | 2 cut(s) | 693, 1264 |
| BtsIMutI | CAGTG | 3 cut(s) | 881, 951, 1578 |
| BveI | ACCTGC | 1 cut(s) | 1004 |
| Cac8I | GCNNGC | 6 cut(s) | 316, 362, 385, 407, 480, 771 |
| CfoI | GCGC | 1 cut(s) | 8 |
| Cfr10I | RCCGGY | 3 cut(s) | 314, 401, 405 |
| Cfr13I | GGNCC | 9 cut(s) | 196, 239, 345, 358, 367, 382, 447, 564, 1370 |
| Cfr9I | CCCGGG | 1 cut(s) | 241 |
| CseI | GACGC | 4 cut(s) | 71, 164, 573, 781 |
| Csp6I | GTAC | 5 cut(s) | 124, 978, 1283, 1497, 1576 |
| CviAII | CATG | 6 cut(s) | 41, 355, 469, 1138, 1351, 1392 |
| CviQI | GTAC | 5 cut(s) | 124, 978, 1283, 1497, 1576 |
| DdeI | CTNAG | 7 cut(s) | 32, 192, 474, 539, 749, 1175, 1245 |
| DpnI | GATC | 8 cut(s) | 143, 149, 273, 294, 311, 852, 1187, 1349 |
| DpnII | GATC | 8 cut(s) | 141, 147, 271, 292, 309, 850, 1185, 1347 |
| DraI | TTTAAA | 1 cut(s) | 1266 |
| EaeI | YGGCCR | 2 cut(s) | 165, 403 |
| EagI | CGGCCG | 2 cut(s) | 165, 403 |
| EciI | GGCGGA | 2 cut(s) | 431, 509 |
| Ecl136II | GAGCTC | 1 cut(s) | 421 |
| EclXI | CGGCCG | 2 cut(s) | 165, 403 |
| Eco130I | CCWWGG | 3 cut(s) | 45, 354, 963 |
| Eco24I | GRGCYC | 1 cut(s) | 423 |
| Eco47I | GGWCC | 3 cut(s) | 196, 367, 1370 |
| Eco52I | CGGCCG | 2 cut(s) | 165, 403 |
| Eco53kI | GAGCTC | 1 cut(s) | 421 |
| Eco57I | CTGAAG | 3 cut(s) | 1010, 1271, 1476 |
| Eco88I | CYCGRG | 1 cut(s) | 241 |
| EcoICRI | GAGCTC | 1 cut(s) | 421 |
| EcoO109I | RGGNCCY | 1 cut(s) | 196 |
| EcoRII | CCWGG | 3 cut(s) | 212, 411, 683 |
| EcoT14I | CCWWGG | 3 cut(s) | 45, 354, 963 |
| EcoT38I | GRGCYC | 1 cut(s) | 423 |
| ErhI | CCWWGG | 3 cut(s) | 45, 354, 963 |
| FaeI | CATG | 6 cut(s) | 44, 358, 472, 1141, 1354, 1395 |
| FaqI | GGGAC | 2 cut(s) | 182, 1129 |
| FatI | CATG | 6 cut(s) | 40, 354, 468, 1137, 1350, 1391 |
| FauI | CCCGC | 3 cut(s) | 126, 207, 392 |
| FauNDI | CATATG | 2 cut(s) | 1120, 1507 |
| FbaI | TGATCA | 1 cut(s) | 1185 |
| FblI | GTMKAC | 2 cut(s) | 108, 153 |
| FokI | GGATG | 2 cut(s) | 700, 1271 |
| FriOI | GRGCYC | 1 cut(s) | 423 |
| FspBI | CTAG | 1 cut(s) | 1004 |
| GlaI | GCGC | 1 cut(s) | 7 |
| GsaI | CCCAGC | 1 cut(s) | 1128 |
| GsuI | CTGGAG | 1 cut(s) | 281 |
| HaeII | RGCGCY | 1 cut(s) | 9 |
| HaeIII | GGCC | 8 cut(s) | 167, 240, 347, 360, 383, 405, 449, 566 |
| HapII | CCGG | 7 cut(s) | 242, 275, 315, 402, 406, 450, 567 |
| HgaI | GACGC | 4 cut(s) | 71, 164, 573, 781 |
| HhaI | GCGC | 1 cut(s) | 8 |
| Hin1I | GRCGYC | 3 cut(s) | 105, 156, 584 |
| Hin1II | CATG | 6 cut(s) | 44, 358, 472, 1141, 1354, 1395 |
| Hin6I | GCGC | 1 cut(s) | 6 |
| HinP1I | GCGC | 1 cut(s) | 6 |
| HincII | GTYRAC | 4 cut(s) | 38, 109, 154, 697 |
| HindII | GTYRAC | 4 cut(s) | 38, 109, 154, 697 |
| HinfI | GANTC | 8 cut(s) | 128, 161, 185, 190, 393, 535, 902, 1300 |
| HpaII | CCGG | 7 cut(s) | 242, 275, 315, 402, 406, 450, 567 |
| HphI | GGTGA | 2 cut(s) | 637, 1423 |
| Hpy166II | GTNNAC | 6 cut(s) | 38, 109, 154, 234, 697, 1576 |
| Hpy188I | TCNGA | 6 cut(s) | 103, 392, 534, 589, 1246, 1299 |
| Hpy8I | GTNNAC | 6 cut(s) | 38, 109, 154, 234, 697, 1576 |
| HpyAV | CCTTC | 8 cut(s) | 217, 281, 608, 632, 937, 1333, 1559, 1563 |
| HpyCH4III | ACNGT | 2 cut(s) | 955, 1399 |
| HpyCH4IV | ACGT | 1 cut(s) | 105 |
| HpyCH4V | TGCA | 5 cut(s) | 662, 820, 914, 1013, 1505 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 164, 370, 479, 668, 1511 |
| HpyF3I | CTNAG | 7 cut(s) | 32, 192, 474, 539, 749, 1175, 1245 |
| HpySE526I | ACGT | 1 cut(s) | 105 |
| Hsp92I | GRCGYC | 3 cut(s) | 105, 156, 584 |
| Hsp92II | CATG | 6 cut(s) | 44, 358, 472, 1141, 1354, 1395 |
| HspAI | GCGC | 1 cut(s) | 6 |
| KroI | GCCGGC | 2 cut(s) | 314, 405 |
| KroNI | GCCGGC | 2 cut(s) | 316, 407 |
| Ksp22I | TGATCA | 1 cut(s) | 1185 |
| Kzo9I | GATC | 8 cut(s) | 141, 147, 271, 292, 309, 850, 1185, 1347 |
| LmnI | GCTCC | 3 cut(s) | 305, 418, 1342 |
| Lsp1109I | GCAGC | 4 cut(s) | 360, 1100, 1489, 1551 |
| MaeI | CTAG | 1 cut(s) | 1004 |
| MaeII | ACGT | 1 cut(s) | 105 |
| MaeIII | GTNAC | 1 cut(s) | 946 |
| MalI | GATC | 8 cut(s) | 143, 149, 273, 294, 311, 852, 1187, 1349 |
| MbiI | CCGCTC | 1 cut(s) | 559 |
| MboI | GATC | 8 cut(s) | 141, 147, 271, 292, 309, 850, 1185, 1347 |
| MboII | GAAGA | 9 cut(s) | 71, 74, 151, 229, 1016, 1148, 1177, 1351, 1438 |
| MfeI | CAATTG | 2 cut(s) | 897, 909 |
| MflI | RGATCY | 3 cut(s) | 141, 271, 292 |
| MhlI | GDGCHC | 4 cut(s) | 423, 462, 576, 1549 |
| MlyI | GAGTC | 5 cut(s) | 137, 155, 184, 402, 911 |
| MmeI | TCCRAC | 3 cut(s) | 126, 567, 615 |
| MroNI | GCCGGC | 2 cut(s) | 314, 405 |
| MslI | CAYNNNNRTG | 2 cut(s) | 353, 1331 |
| MspA1I | CMGCKG | 3 cut(s) | 373, 1091, 1542 |
| MspI | CCGG | 7 cut(s) | 242, 275, 315, 402, 406, 450, 567 |
| MspR9I | CCNGG | 7 cut(s) | 214, 242, 243, 276, 413, 451, 685 |
| MunI | CAATTG | 2 cut(s) | 897, 909 |
| MvaI | CCWGG | 3 cut(s) | 214, 413, 685 |
| MvnI | CGCG | 2 cut(s) | 133, 429 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 164, 370, 479, 668, 1511 |
| NaeI | GCCGGC | 2 cut(s) | 316, 407 |
| NciI | CCSGG | 4 cut(s) | 242, 243, 276, 451 |
| NcoI | CCATGG | 1 cut(s) | 354 |
| NdeI | CATATG | 2 cut(s) | 1120, 1507 |
| NdeII | GATC | 8 cut(s) | 141, 147, 271, 292, 309, 850, 1185, 1347 |
| NgoMIV | GCCGGC | 2 cut(s) | 314, 405 |
| NlaIII | CATG | 6 cut(s) | 44, 358, 472, 1141, 1354, 1395 |
| NlaIV | GGNNCC | 6 cut(s) | 198, 248, 273, 410, 741, 1546 |
| NmeAIII | GCCGAG | 2 cut(s) | 143, 359 |
| NmuCI | GTSAC | 1 cut(s) | 946 |
| NspI | RCATGY | 1 cut(s) | 44 |
| OliI | CACNNNNGTG | 1 cut(s) | 1331 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 156 |
| PdiI | GCCGGC | 2 cut(s) | 316, 407 |
| PfeI | GAWTC | 3 cut(s) | 185, 535, 1300 |
| Pfl23II | CGTACG | 1 cut(s) | 123 |
| PfoI | TCCNGGA | 1 cut(s) | 212 |
| Ple19I | CGATCG | 1 cut(s) | 312 |
| PleI | GAGTC | 5 cut(s) | 136, 155, 184, 401, 910 |
| PpsI | GAGTC | 5 cut(s) | 136, 155, 184, 401, 910 |
| PpuMI | RGGWCCY | 1 cut(s) | 196 |
| PshAI | GACNNNNGTC | 1 cut(s) | 194 |
| Psp124BI | GAGCTC | 1 cut(s) | 423 |
| Psp5II | RGGWCCY | 1 cut(s) | 196 |
| Psp6I | CCWGG | 3 cut(s) | 212, 411, 683 |
| PspFI | CCCAGC | 1 cut(s) | 1124 |
| PspGI | CCWGG | 3 cut(s) | 212, 411, 683 |
| PspLI | CGTACG | 1 cut(s) | 123 |
| PspN4I | GGNNCC | 6 cut(s) | 198, 248, 273, 410, 741, 1546 |
| PspPI | GGNCC | 9 cut(s) | 196, 239, 345, 358, 367, 382, 447, 564, 1370 |
| PspPPI | RGGWCCY | 1 cut(s) | 196 |
| PsuI | RGATCY | 3 cut(s) | 141, 271, 292 |
| PvuI | CGATCG | 1 cut(s) | 312 |
| PvuII | CAGCTG | 2 cut(s) | 373, 1091 |
| RgaI | GCGATCGC | 1 cut(s) | 312 |
| RsaI | GTAC | 5 cut(s) | 125, 979, 1284, 1498, 1577 |
| RsaNI | GTAC | 5 cut(s) | 124, 978, 1283, 1497, 1576 |
| RseI | CAYNNNNRTG | 2 cut(s) | 353, 1331 |
| SacI | GAGCTC | 1 cut(s) | 423 |
| SalI | GTCGAC | 2 cut(s) | 107, 152 |
| Sau3AI | GATC | 8 cut(s) | 141, 147, 271, 292, 309, 850, 1185, 1347 |
| Sau96I | GGNCC | 9 cut(s) | 196, 239, 345, 358, 367, 382, 447, 564, 1370 |
| SchI | GAGTC | 5 cut(s) | 137, 155, 184, 402, 911 |
| ScrFI | CCNGG | 7 cut(s) | 214, 242, 243, 276, 413, 451, 685 |
| SduI | GDGCHC | 4 cut(s) | 423, 462, 576, 1549 |
| SfaAI | GCGATCGC | 1 cut(s) | 312 |
| SfcI | CTRYAG | 1 cut(s) | 1489 |
| SgfI | GCGATCGC | 1 cut(s) | 312 |
| SgrDI | CGTCGACG | 2 cut(s) | 107, 152 |
| SinI | GGWCC | 3 cut(s) | 196, 367, 1370 |
| SmaI | CCCGGG | 1 cut(s) | 243 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 353, 1331 |
| SmlI | CTYRAG | 2 cut(s) | 611, 754 |
| SmoI | CTYRAG | 2 cut(s) | 611, 754 |
| SpeI | ACTAGT | 1 cut(s) | 1003 |
| SspI | AATATT | 1 cut(s) | 847 |
| SspMI | CTAG | 1 cut(s) | 1004 |
| SstI | GAGCTC | 1 cut(s) | 423 |
| StyD4I | CCNGG | 7 cut(s) | 212, 240, 241, 274, 411, 449, 683 |
| StyI | CCWWGG | 3 cut(s) | 45, 354, 963 |
| TaaI | ACNGT | 2 cut(s) | 955, 1399 |
| TaiI | ACGT | 1 cut(s) | 108 |
| TaqI | TCGA | 5 cut(s) | 108, 153, 188, 1337, 1380 |
| TatI | WGTACW | 2 cut(s) | 1282, 1575 |
| TauI | GCSGC | 6 cut(s) | 19, 170, 173, 205, 429, 559 |
| TfiI | GAWTC | 3 cut(s) | 185, 535, 1300 |
| TscAI | CASTG | 3 cut(s) | 888, 958, 1578 |
| TseFI | GTSAC | 1 cut(s) | 946 |
| TseI | GCWGC | 4 cut(s) | 373, 1088, 1502, 1539 |
| Tsp45I | GTSAC | 1 cut(s) | 946 |
| TspDTI | ATGAA | 2 cut(s) | 457, 1438 |
| TspMI | CCCGGG | 1 cut(s) | 241 |
| TspRI | CASTG | 3 cut(s) | 888, 958, 1578 |
| VpaK11BI | GGWCC | 3 cut(s) | 196, 367, 1370 |
| XapI | RAATTY | 1 cut(s) | 280 |
| XceI | RCATGY | 1 cut(s) | 44 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 361 |
| XmaI | CCCGGG | 1 cut(s) | 241 |
| XmiI | GTMKAC | 2 cut(s) | 108, 153 |
| XspI | CTAG | 1 cut(s) | 1004 |
| ZraI | GACGTC | 1 cut(s) | 106 |