MuDR family transposase
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 542 |
| Acc36I | ACCTGC | 1 cut(s) | 644 |
| AccB1I | GGYRCC | 1 cut(s) | 965 |
| AccI | GTMKAC | 2 cut(s) | 28, 1277 |
| AccII | CGCG | 1 cut(s) | 912 |
| AccIII | TCCGGA | 1 cut(s) | 1561 |
| AciI | CCGC | 3 cut(s) | 787, 910, 2138 |
| AclWI | GGATC | 6 cut(s) | 107, 223, 609, 1101, 1297, 1307 |
| AcsI | RAATTY | 8 cut(s) | 74, 200, 610, 742, 836, 1709, 1792, 2242 |
| AcvI | CACGTG | 1 cut(s) | 1040 |
| AdeI | CACNNNGTG | 1 cut(s) | 1298 |
| AfaI | GTAC | 5 cut(s) | 14, 51, 1036, 2146, 2503 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 306 |
| AflIII | ACRYGT | 2 cut(s) | 1037, 2498 |
| AjiI | CACGTC | 1 cut(s) | 2499 |
| AjnI | CCWGG | 4 cut(s) | 1285, 1315, 2401, 2444 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 719, 751 |
| Alw21I | GWGCWC | 4 cut(s) | 279, 374, 1816, 2218 |
| Alw26I | GTCTC | 4 cut(s) | 780, 1257, 1936, 2403 |
| Alw44I | GTGCAC | 1 cut(s) | 370 |
| AlwI | GGATC | 6 cut(s) | 107, 223, 609, 1101, 1297, 1307 |
| Ama87I | CYCGRG | 1 cut(s) | 2048 |
| Aor13HI | TCCGGA | 1 cut(s) | 1561 |
| AoxI | GGCC | 1 cut(s) | 2448 |
| ApaLI | GTGCAC | 1 cut(s) | 370 |
| ApeKI | GCWGC | 3 cut(s) | 520, 1769, 2250 |
| ApoI | RAATTY | 8 cut(s) | 74, 200, 610, 742, 836, 1709, 1792, 2242 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 167, 199 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1712, 1839 |
| AspLEI | GCGC | 3 cut(s) | 543, 629, 1751 |
| AspS9I | GGNCC | 2 cut(s) | 2405, 2448 |
| AsuHPI | GGTGA | 4 cut(s) | 497, 734, 1235, 1901 |
| AvaI | CYCGRG | 1 cut(s) | 2048 |
| AvaII | GGWCC | 1 cut(s) | 2405 |
| AxyI | CCTNAGG | 1 cut(s) | 270 |
| BaeGI | GKGCMC | 1 cut(s) | 374 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1569, 1602 |
| BanI | GGYRCC | 1 cut(s) | 965 |
| BanII | GRGCYC | 1 cut(s) | 279 |
| BauI | CACGAG | 1 cut(s) | 1027 |
| BbrPI | CACGTG | 1 cut(s) | 1040 |
| BbsI | GAAGAC | 2 cut(s) | 303, 2501 |
| Bbv12I | GWGCWC | 4 cut(s) | 279, 374, 1816, 2218 |
| BbvI | GCAGC | 3 cut(s) | 507, 1756, 2237 |
| BccI | CCATC | 5 cut(s) | 865, 1454, 1964, 2047, 2404 |
| BciT130I | CCWGG | 4 cut(s) | 1287, 1317, 2403, 2446 |
| BclI | TGATCA | 1 cut(s) | 502 |
| BcoDI | GTCTC | 4 cut(s) | 780, 1257, 1936, 2403 |
| BfaI | CTAG | 3 cut(s) | 362, 560, 2112 |
| BfmI | CTRYAG | 1 cut(s) | 651 |
| BfoI | RGCGCY | 1 cut(s) | 630 |
| BfuAI | ACCTGC | 1 cut(s) | 644 |
| BisI | GCNGC | 3 cut(s) | 521, 1770, 2251 |
| BlsI | GCNGC | 3 cut(s) | 522, 1771, 2252 |
| Bme1390I | CCNGG | 4 cut(s) | 1287, 1317, 2403, 2446 |
| Bme18I | GGWCC | 1 cut(s) | 2405 |
| BmeT110I | CYCGRG | 1 cut(s) | 2048 |
| BmgBI | CACGTC | 1 cut(s) | 2499 |
| BmgT120I | GGNCC | 2 cut(s) | 2405, 2448 |
| BmiI | GGNNCC | 2 cut(s) | 324, 967 |
| BmrFI | CCNGG | 4 cut(s) | 1287, 1317, 2403, 2446 |
| BmrI | ACTGGG | 1 cut(s) | 1461 |
| BmsI | GCATC | 4 cut(s) | 9, 1393, 1736, 1935 |
| BmuI | ACTGGG | 1 cut(s) | 1461 |
| BpiI | GAAGAC | 2 cut(s) | 303, 2501 |
| BpmI | CTGGAG | 2 cut(s) | 1543, 2385 |
| BpuEI | CTTGAG | 1 cut(s) | 762 |
| BsaAI | YACGTR | 2 cut(s) | 1040, 1701 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1464 |
| BsaI | GGTCTC | 1 cut(s) | 1936 |
| BsaJI | CCNNGG | 5 cut(s) | 195, 1316, 1845, 2444, 2445 |
| BsaWI | WCCGGW | 2 cut(s) | 15, 1561 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1841, 1871 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 306 |
| Bse1I | ACTGG | 5 cut(s) | 88, 351, 724, 1456, 1526 |
| Bse21I | CCTNAGG | 1 cut(s) | 270 |
| Bse3DI | GCAATG | 1 cut(s) | 2033 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1464 |
| BseAI | TCCGGA | 1 cut(s) | 1561 |
| BseBI | CCWGG | 4 cut(s) | 1287, 1317, 2403, 2446 |
| BseDI | CCNNGG | 5 cut(s) | 195, 1316, 1845, 2444, 2445 |
| BseGI | GGATG | 5 cut(s) | 24, 541, 950, 1465, 1950 |
| BseJI | GATNNNNATC | 1 cut(s) | 1464 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 306 |
| BseMI | GCAATG | 1 cut(s) | 2033 |
| BseMII | CTCAG | 4 cut(s) | 261, 315, 396, 1926 |
| BseNI | ACTGG | 5 cut(s) | 88, 351, 724, 1456, 1526 |
| BseRI | GAGGAG | 2 cut(s) | 287, 2373 |
| BseSI | GKGCMC | 1 cut(s) | 374 |
| BseXI | GCAGC | 3 cut(s) | 507, 1756, 2237 |
| BseYI | CCCAGC | 1 cut(s) | 1190 |
| BsgI | GTGCAG | 2 cut(s) | 1402, 2493 |
| Bsh1236I | CGCG | 1 cut(s) | 912 |
| BshFI | GGCC | 1 cut(s) | 2450 |
| BshNI | GGYRCC | 1 cut(s) | 965 |
| BsiHKAI | GWGCWC | 4 cut(s) | 279, 374, 1816, 2218 |
| BsiHKCI | CYCGRG | 1 cut(s) | 2048 |
| BsiSI | CCGG | 2 cut(s) | 16, 1562 |
| BslFI | GGGAC | 4 cut(s) | 1207, 1333, 1446, 2031 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 306 |
| BsmAI | GTCTC | 4 cut(s) | 780, 1257, 1936, 2403 |
| BsmBI | CGTCTC | 1 cut(s) | 1257 |
| BsmFI | GGGAC | 4 cut(s) | 1207, 1333, 1446, 2031 |
| BsmI | GAATGC | 2 cut(s) | 389, 2347 |
| BsnI | GGCC | 1 cut(s) | 2450 |
| Bso31I | GGTCTC | 1 cut(s) | 1936 |
| BsoBI | CYCGRG | 1 cut(s) | 2048 |
| Bsp1286I | GDGCHC | 4 cut(s) | 279, 374, 1816, 2218 |
| Bsp13I | TCCGGA | 1 cut(s) | 1561 |
| Bsp1407I | TGTACA | 1 cut(s) | 1034 |
| BspACI | CCGC | 3 cut(s) | 787, 910, 2138 |
| BspANI | GGCC | 1 cut(s) | 2450 |
| BspCNI | CTCAG | 4 cut(s) | 262, 314, 395, 1927 |
| BspEI | TCCGGA | 1 cut(s) | 1561 |
| BspFNI | CGCG | 1 cut(s) | 912 |
| BspHI | TCATGA | 1 cut(s) | 2185 |
| BspLI | GGNNCC | 2 cut(s) | 324, 967 |
| BspMAI | CTGCAG | 1 cut(s) | 655 |
| BspMI | ACCTGC | 1 cut(s) | 644 |
| BspPI | GGATC | 6 cut(s) | 107, 223, 609, 1101, 1297, 1307 |
| BspT107I | GGYRCC | 1 cut(s) | 965 |
| BspTNI | GGTCTC | 1 cut(s) | 1936 |
| BsrDI | GCAATG | 1 cut(s) | 2033 |
| BsrGI | TGTACA | 1 cut(s) | 1034 |
| BsrI | ACTGG | 5 cut(s) | 88, 351, 724, 1456, 1526 |
| BssECI | CCNNGG | 5 cut(s) | 195, 1316, 1845, 2444, 2445 |
| BssSI | CACGAG | 1 cut(s) | 1027 |
| BssT1I | CCWWGG | 2 cut(s) | 195, 1845 |
| Bst2BI | CACGAG | 1 cut(s) | 1027 |
| Bst2UI | CCWGG | 4 cut(s) | 1287, 1317, 2403, 2446 |
| Bst4CI | ACNGT | 8 cut(s) | 120, 256, 700, 713, 1355, 1664, 2149, 2155 |
| BstAUI | TGTACA | 1 cut(s) | 1034 |
| BstBAI | YACGTR | 2 cut(s) | 1040, 1701 |
| BstC8I | GCNNGC | 1 cut(s) | 1360 |
| BstDEI | CTNAG | 6 cut(s) | 23, 270, 301, 382, 1206, 1935 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 304 |
| BstF5I | GGATG | 5 cut(s) | 24, 541, 950, 1465, 1950 |
| BstFNI | CGCG | 1 cut(s) | 912 |
| BstH2I | RGCGCY | 1 cut(s) | 630 |
| BstHHI | GCGC | 3 cut(s) | 543, 629, 1751 |
| BstMAI | GTCTC | 4 cut(s) | 780, 1257, 1936, 2403 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 167, 362, 378, 1703, 1945 |
| BstNI | CCWGG | 4 cut(s) | 1287, 1317, 2403, 2446 |
| BstNSI | RCATGY | 1 cut(s) | 1026 |
| BstSCI | CCNGG | 4 cut(s) | 1285, 1315, 2401, 2444 |
| BstSFI | CTRYAG | 1 cut(s) | 651 |
| BstSLI | GKGCMC | 1 cut(s) | 374 |
| BstSNI | TACGTA | 1 cut(s) | 1701 |
| BstUI | CGCG | 1 cut(s) | 912 |
| BstV1I | GCAGC | 3 cut(s) | 507, 1756, 2237 |
| BstV2I | GAAGAC | 2 cut(s) | 303, 2501 |
| BstX2I | RGATCY | 1 cut(s) | 112 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 871 |
| BstYI | RGATCY | 1 cut(s) | 112 |
| Bsu36I | CCTNAGG | 1 cut(s) | 270 |
| BsuRI | GGCC | 1 cut(s) | 2450 |
| BtgZI | GCGATG | 2 cut(s) | 1527, 1759 |
| BtrI | CACGTC | 1 cut(s) | 2499 |
| BtsCI | GGATG | 5 cut(s) | 24, 541, 950, 1465, 1950 |
| BtsIMutI | CAGTG | 3 cut(s) | 717, 718, 1382 |
| BveI | ACCTGC | 1 cut(s) | 644 |
| Cac8I | GCNNGC | 1 cut(s) | 1360 |
| CciI | TCATGA | 1 cut(s) | 2185 |
| CfoI | GCGC | 3 cut(s) | 543, 629, 1751 |
| Cfr13I | GGNCC | 2 cut(s) | 2405, 2448 |
| CseI | GACGC | 1 cut(s) | 1274 |
| Csp6I | GTAC | 5 cut(s) | 13, 50, 1035, 2145, 2502 |
| CviQI | GTAC | 5 cut(s) | 13, 50, 1035, 2145, 2502 |
| DdeI | CTNAG | 6 cut(s) | 23, 270, 301, 382, 1206, 1935 |
| DraI | TTTAAA | 1 cut(s) | 1797 |
| DraIII | CACNNNGTG | 1 cut(s) | 1298 |
| Ecl136II | GAGCTC | 1 cut(s) | 277 |
| Eco105I | TACGTA | 1 cut(s) | 1701 |
| Eco130I | CCWWGG | 2 cut(s) | 195, 1845 |
| Eco24I | GRGCYC | 1 cut(s) | 279 |
| Eco31I | GGTCTC | 1 cut(s) | 1936 |
| Eco32I | GATATC | 1 cut(s) | 1168 |
| Eco47I | GGWCC | 1 cut(s) | 2405 |
| Eco53kI | GAGCTC | 1 cut(s) | 277 |
| Eco72I | CACGTG | 1 cut(s) | 1040 |
| Eco81I | CCTNAGG | 1 cut(s) | 270 |
| Eco88I | CYCGRG | 1 cut(s) | 2048 |
| EcoICRI | GAGCTC | 1 cut(s) | 277 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 304 |
| EcoRI | GAATTC | 5 cut(s) | 74, 610, 742, 836, 2242 |
| EcoRII | CCWGG | 4 cut(s) | 1285, 1315, 2401, 2444 |
| EcoRV | GATATC | 1 cut(s) | 1168 |
| EcoT14I | CCWWGG | 2 cut(s) | 195, 1845 |
| EcoT22I | ATGCAT | 2 cut(s) | 769, 1651 |
| EcoT38I | GRGCYC | 1 cut(s) | 279 |
| ErhI | CCWWGG | 2 cut(s) | 195, 1845 |
| Esp3I | CGTCTC | 1 cut(s) | 1257 |
| FaqI | GGGAC | 4 cut(s) | 1207, 1333, 1446, 2031 |
| FauI | CCCGC | 1 cut(s) | 780 |
| FauNDI | CATATG | 4 cut(s) | 34, 166, 490, 2305 |
| FbaI | TGATCA | 1 cut(s) | 502 |
| FblI | GTMKAC | 2 cut(s) | 28, 1277 |
| Fnu4HI | GCNGC | 3 cut(s) | 521, 1770, 2251 |
| FokI | GGATG | 5 cut(s) | 31, 548, 957, 1472, 1957 |
| FriOI | GRGCYC | 1 cut(s) | 279 |
| Fsp4HI | GCNGC | 3 cut(s) | 521, 1770, 2251 |
| FspAI | RTGCGCAY | 1 cut(s) | 542 |
| FspBI | CTAG | 3 cut(s) | 362, 560, 2112 |
| FspI | TGCGCA | 1 cut(s) | 542 |
| GlaI | GCGC | 3 cut(s) | 542, 628, 1750 |
| GluI | GCNGC | 3 cut(s) | 521, 1770, 2251 |
| GsaI | CCCAGC | 1 cut(s) | 1194 |
| GsuI | CTGGAG | 2 cut(s) | 1543, 2385 |
| HaeII | RGCGCY | 1 cut(s) | 630 |
| HaeIII | GGCC | 1 cut(s) | 2450 |
| HapII | CCGG | 2 cut(s) | 16, 1562 |
| HgaI | GACGC | 1 cut(s) | 1274 |
| HhaI | GCGC | 3 cut(s) | 543, 629, 1751 |
| Hin6I | GCGC | 3 cut(s) | 541, 627, 1749 |
| HinP1I | GCGC | 3 cut(s) | 541, 627, 1749 |
| HincII | GTYRAC | 1 cut(s) | 29 |
| HindII | GTYRAC | 1 cut(s) | 29 |
| HindIII | AAGCTT | 1 cut(s) | 2420 |
| HpaII | CCGG | 2 cut(s) | 16, 1562 |
| HphI | GGTGA | 4 cut(s) | 497, 734, 1235, 1901 |
| Hpy166II | GTNNAC | 7 cut(s) | 29, 50, 372, 889, 1037, 1278, 2502 |
| Hpy8I | GTNNAC | 7 cut(s) | 29, 50, 372, 889, 1037, 1278, 2502 |
| HpyAV | CCTTC | 7 cut(s) | 592, 617, 1450, 1559, 1607, 1783, 2348 |
| HpyCH4III | ACNGT | 8 cut(s) | 120, 256, 700, 713, 1355, 1664, 2149, 2155 |
| HpyCH4IV | ACGT | 4 cut(s) | 666, 1039, 1700, 2498 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 167, 362, 378, 1703, 1945 |
| HpyF3I | CTNAG | 6 cut(s) | 23, 270, 301, 382, 1206, 1935 |
| HpySE526I | ACGT | 4 cut(s) | 666, 1039, 1700, 2498 |
| HspAI | GCGC | 3 cut(s) | 541, 627, 1749 |
| Kpn2I | TCCGGA | 1 cut(s) | 1561 |
| Ksp22I | TGATCA | 1 cut(s) | 502 |
| LmnI | GCTCC | 6 cut(s) | 274, 474, 827, 1524, 1762, 1819 |
| Lsp1109I | GCAGC | 3 cut(s) | 507, 1756, 2237 |
| LweI | GCATC | 4 cut(s) | 9, 1393, 1736, 1935 |
| MaeI | CTAG | 3 cut(s) | 362, 560, 2112 |
| MaeII | ACGT | 4 cut(s) | 666, 1039, 1700, 2498 |
| MaeIII | GTNAC | 8 cut(s) | 98, 690, 707, 842, 1595, 1898, 2101, 2149 |
| MboII | GAAGA | 8 cut(s) | 303, 770, 1071, 1681, 1684, 1832, 2269, 2506 |
| MflI | RGATCY | 1 cut(s) | 112 |
| MhlI | GDGCHC | 4 cut(s) | 279, 374, 1816, 2218 |
| MlyI | GAGTC | 4 cut(s) | 656, 1316, 1496, 1552 |
| MmeI | TCCRAC | 3 cut(s) | 1284, 1784, 2458 |
| Mph1103I | ATGCAT | 2 cut(s) | 769, 1651 |
| MroI | TCCGGA | 1 cut(s) | 1561 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1712, 1839 |
| MslI | CAYNNNNRTG | 3 cut(s) | 93, 869, 1224 |
| MspI | CCGG | 2 cut(s) | 16, 1562 |
| MspR9I | CCNGG | 4 cut(s) | 1287, 1317, 2403, 2446 |
| Mva1269I | GAATGC | 2 cut(s) | 389, 2347 |
| MvaI | CCWGG | 4 cut(s) | 1287, 1317, 2403, 2446 |
| MvnI | CGCG | 1 cut(s) | 912 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 167, 362, 378, 1703, 1945 |
| NdeI | CATATG | 4 cut(s) | 34, 166, 490, 2305 |
| NlaIV | GGNNCC | 2 cut(s) | 324, 967 |
| NmuCI | GTSAC | 3 cut(s) | 98, 690, 707 |
| NsbI | TGCGCA | 1 cut(s) | 542 |
| NsiI | ATGCAT | 2 cut(s) | 769, 1651 |
| NspI | RCATGY | 1 cut(s) | 1026 |
| PagI | TCATGA | 1 cut(s) | 2185 |
| PasI | CCCWGGG | 1 cut(s) | 2445 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 2504 |
| PctI | GAATGC | 2 cut(s) | 389, 2347 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1712, 1839 |
| PfeI | GAWTC | 7 cut(s) | 152, 284, 335, 1229, 1675, 1913, 2011 |
| PfoI | TCCNGGA | 1 cut(s) | 1285 |
| PkrI | GCNGC | 3 cut(s) | 522, 1771, 2252 |
| PleI | GAGTC | 4 cut(s) | 655, 1315, 1496, 1552 |
| PmaCI | CACGTG | 1 cut(s) | 1040 |
| PmlI | CACGTG | 1 cut(s) | 1040 |
| PpsI | GAGTC | 4 cut(s) | 655, 1315, 1496, 1552 |
| Ppu21I | YACGTR | 2 cut(s) | 1040, 1701 |
| Psp124BI | GAGCTC | 1 cut(s) | 279 |
| Psp6I | CCWGG | 4 cut(s) | 1285, 1315, 2401, 2444 |
| PspCI | CACGTG | 1 cut(s) | 1040 |
| PspFI | CCCAGC | 1 cut(s) | 1190 |
| PspGI | CCWGG | 4 cut(s) | 1285, 1315, 2401, 2444 |
| PspN4I | GGNNCC | 2 cut(s) | 324, 967 |
| PspPI | GGNCC | 2 cut(s) | 2405, 2448 |
| PstI | CTGCAG | 1 cut(s) | 655 |
| PsuI | RGATCY | 1 cut(s) | 112 |
| RsaI | GTAC | 5 cut(s) | 14, 51, 1036, 2146, 2503 |
| RsaNI | GTAC | 5 cut(s) | 13, 50, 1035, 2145, 2502 |
| RseI | CAYNNNNRTG | 3 cut(s) | 93, 869, 1224 |
| SacI | GAGCTC | 1 cut(s) | 279 |
| SalI | GTCGAC | 1 cut(s) | 27 |
| SatI | GCNGC | 3 cut(s) | 521, 1770, 2251 |
| Sau96I | GGNCC | 2 cut(s) | 2405, 2448 |
| SchI | GAGTC | 4 cut(s) | 656, 1316, 1496, 1552 |
| ScrFI | CCNGG | 4 cut(s) | 1287, 1317, 2403, 2446 |
| SduI | GDGCHC | 4 cut(s) | 279, 374, 1816, 2218 |
| SfaNI | GCATC | 4 cut(s) | 9, 1393, 1736, 1935 |
| SfcI | CTRYAG | 1 cut(s) | 651 |
| SinI | GGWCC | 1 cut(s) | 2405 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 93, 869, 1224 |
| SmlI | CTYRAG | 1 cut(s) | 777 |
| SmoI | CTYRAG | 1 cut(s) | 777 |
| SnaBI | TACGTA | 1 cut(s) | 1701 |
| SsiI | CCGC | 3 cut(s) | 787, 910, 2138 |
| SspI | AATATT | 4 cut(s) | 574, 619, 1689, 2512 |
| SspMI | CTAG | 3 cut(s) | 362, 560, 2112 |
| SstI | GAGCTC | 1 cut(s) | 279 |
| StyD4I | CCNGG | 4 cut(s) | 1285, 1315, 2401, 2444 |
| StyI | CCWWGG | 2 cut(s) | 195, 1845 |
| TaaI | ACNGT | 8 cut(s) | 120, 256, 700, 713, 1355, 1664, 2149, 2155 |
| TaiI | ACGT | 4 cut(s) | 669, 1042, 1703, 2501 |
| TaqI | TCGA | 4 cut(s) | 28, 333, 1776, 2464 |
| TatI | WGTACW | 3 cut(s) | 49, 1034, 2501 |
| TfiI | GAWTC | 7 cut(s) | 152, 284, 335, 1229, 1675, 1913, 2011 |
| TscAI | CASTG | 3 cut(s) | 718, 724, 1382 |
| TseFI | GTSAC | 3 cut(s) | 98, 690, 707 |
| TseI | GCWGC | 3 cut(s) | 520, 1769, 2250 |
| Tsp45I | GTSAC | 3 cut(s) | 98, 690, 707 |
| TspGWI | ACGGA | 4 cut(s) | 296, 830, 1091, 1778 |
| TspRI | CASTG | 3 cut(s) | 718, 724, 1382 |
| VneI | GTGCAC | 1 cut(s) | 370 |
| VpaK11BI | GGWCC | 1 cut(s) | 2405 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 304 |
| XapI | RAATTY | 8 cut(s) | 74, 200, 610, 742, 836, 1709, 1792, 2242 |
| XbaI | TCTAGA | 1 cut(s) | 559 |
| XceI | RCATGY | 1 cut(s) | 1026 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 1967, 2332 |
| XmiI | GTMKAC | 2 cut(s) | 28, 1277 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1712, 1839 |
| XspI | CTAG | 3 cut(s) | 362, 560, 2112 |
| Zsp2I | ATGCAT | 2 cut(s) | 769, 1651 |