isoform X1
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 456 |
| AccII | CGCG | 2 cut(s) | 13, 272 |
| AcoI | YGGCCR | 1 cut(s) | 436 |
| AcyI | GRCGYC | 1 cut(s) | 457 |
| AflIII | ACRYGT | 1 cut(s) | 258 |
| AgsI | TTSAA | 4 cut(s) | 20, 100, 145, 330 |
| AluBI | AGCT | 4 cut(s) | 55, 212, 247, 323 |
| AluI | AGCT | 4 cut(s) | 55, 212, 247, 323 |
| Alw26I | GTCTC | 2 cut(s) | 69, 141 |
| AoxI | GGCC | 3 cut(s) | 362, 374, 436 |
| ApeKI | GCWGC | 4 cut(s) | 40, 247, 320, 401 |
| AspLEI | GCGC | 4 cut(s) | 15, 274, 459, 484 |
| AsuHPI | GGTGA | 2 cut(s) | 242, 458 |
| AsuII | TTCGAA | 1 cut(s) | 388 |
| BanI | GGYRCC | 1 cut(s) | 456 |
| BauI | CACGAG | 1 cut(s) | 415 |
| BbvI | GCAGC | 4 cut(s) | 52, 234, 332, 413 |
| BccI | CCATC | 2 cut(s) | 221, 373 |
| BcoDI | GTCTC | 2 cut(s) | 69, 141 |
| BfaI | CTAG | 2 cut(s) | 204, 324 |
| BfmI | CTRYAG | 1 cut(s) | 399 |
| BfoI | RGCGCY | 1 cut(s) | 460 |
| BisI | GCNGC | 4 cut(s) | 41, 248, 321, 402 |
| BlsI | GCNGC | 4 cut(s) | 42, 249, 322, 403 |
| BmiI | GGNNCC | 1 cut(s) | 458 |
| BmsI | GCATC | 1 cut(s) | 307 |
| Bpu14I | TTCGAA | 1 cut(s) | 388 |
| BpuEI | CTTGAG | 1 cut(s) | 101 |
| BsaHI | GRCGYC | 1 cut(s) | 457 |
| BsaI | GGTCTC | 1 cut(s) | 69 |
| BsaJI | CCNNGG | 1 cut(s) | 217 |
| BseDI | CCNNGG | 1 cut(s) | 217 |
| BseGI | GGATG | 2 cut(s) | 283, 365 |
| BseMII | CTCAG | 1 cut(s) | 257 |
| BseRI | GAGGAG | 1 cut(s) | 433 |
| BseXI | GCAGC | 4 cut(s) | 52, 234, 332, 413 |
| Bsh1236I | CGCG | 2 cut(s) | 13, 272 |
| BshFI | GGCC | 3 cut(s) | 364, 376, 438 |
| BshNI | GGYRCC | 1 cut(s) | 456 |
| BsiSI | CCGG | 1 cut(s) | 369 |
| BsmAI | GTCTC | 2 cut(s) | 69, 141 |
| BsmI | GAATGC | 1 cut(s) | 148 |
| BsnI | GGCC | 3 cut(s) | 364, 376, 438 |
| Bso31I | GGTCTC | 1 cut(s) | 69 |
| Bsp119I | TTCGAA | 1 cut(s) | 388 |
| Bsp19I | CCATGG | 1 cut(s) | 217 |
| BspANI | GGCC | 3 cut(s) | 364, 376, 438 |
| BspCNI | CTCAG | 1 cut(s) | 256 |
| BspFNI | CGCG | 2 cut(s) | 13, 272 |
| BspHI | TCATGA | 1 cut(s) | 223 |
| BspLI | GGNNCC | 1 cut(s) | 458 |
| BspMAI | CTGCAG | 1 cut(s) | 403 |
| BspQI | GCTCTTC | 1 cut(s) | 15 |
| BspT104I | TTCGAA | 1 cut(s) | 388 |
| BspT107I | GGYRCC | 1 cut(s) | 456 |
| BspTNI | GGTCTC | 1 cut(s) | 69 |
| BssECI | CCNNGG | 1 cut(s) | 217 |
| BssNI | GRCGYC | 1 cut(s) | 457 |
| BssSI | CACGAG | 1 cut(s) | 415 |
| BssT1I | CCWWGG | 1 cut(s) | 217 |
| Bst2BI | CACGAG | 1 cut(s) | 415 |
| Bst6I | CTCTTC | 1 cut(s) | 15 |
| BstACI | GRCGYC | 1 cut(s) | 457 |
| BstBI | TTCGAA | 1 cut(s) | 388 |
| BstC8I | GCNNGC | 1 cut(s) | 374 |
| BstDEI | CTNAG | 2 cut(s) | 35, 243 |
| BstDSI | CCRYGG | 1 cut(s) | 217 |
| BstF5I | GGATG | 2 cut(s) | 283, 365 |
| BstFNI | CGCG | 2 cut(s) | 13, 272 |
| BstH2I | RGCGCY | 1 cut(s) | 460 |
| BstHHI | GCGC | 4 cut(s) | 15, 274, 459, 484 |
| BstMAI | GTCTC | 2 cut(s) | 69, 141 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 209 |
| BstNSI | RCATGY | 1 cut(s) | 262 |
| BstSFI | CTRYAG | 1 cut(s) | 399 |
| BstUI | CGCG | 2 cut(s) | 13, 272 |
| BstV1I | GCAGC | 4 cut(s) | 52, 234, 332, 413 |
| BsuRI | GGCC | 3 cut(s) | 364, 376, 438 |
| BtgI | CCRYGG | 1 cut(s) | 217 |
| BtsCI | GGATG | 2 cut(s) | 283, 365 |
| Cac8I | GCNNGC | 1 cut(s) | 374 |
| CciI | TCATGA | 1 cut(s) | 223 |
| CfoI | GCGC | 4 cut(s) | 15, 274, 459, 484 |
| CviAII | CATG | 5 cut(s) | 68, 218, 224, 259, 275 |
| DdeI | CTNAG | 2 cut(s) | 35, 243 |
| DinI | GGCGCC | 1 cut(s) | 458 |
| EaeI | YGGCCR | 1 cut(s) | 436 |
| Eam1104I | CTCTTC | 1 cut(s) | 15 |
| EarI | CTCTTC | 1 cut(s) | 15 |
| Eco130I | CCWWGG | 1 cut(s) | 217 |
| Eco31I | GGTCTC | 1 cut(s) | 69 |
| EcoT14I | CCWWGG | 1 cut(s) | 217 |
| EgeI | GGCGCC | 1 cut(s) | 458 |
| EheI | GGCGCC | 1 cut(s) | 458 |
| ErhI | CCWWGG | 1 cut(s) | 217 |
| FaeI | CATG | 5 cut(s) | 71, 221, 227, 262, 278 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 18, 50 |
| FatI | CATG | 5 cut(s) | 67, 217, 223, 258, 274 |
| Fnu4HI | GCNGC | 4 cut(s) | 41, 248, 321, 402 |
| FokI | GGATG | 2 cut(s) | 270, 352 |
| Fsp4HI | GCNGC | 4 cut(s) | 41, 248, 321, 402 |
| FspBI | CTAG | 2 cut(s) | 204, 324 |
| GlaI | GCGC | 4 cut(s) | 14, 273, 458, 483 |
| GluI | GCNGC | 4 cut(s) | 41, 248, 321, 402 |
| HaeII | RGCGCY | 1 cut(s) | 460 |
| HaeIII | GGCC | 3 cut(s) | 364, 376, 438 |
| HapII | CCGG | 1 cut(s) | 369 |
| HhaI | GCGC | 4 cut(s) | 15, 274, 459, 484 |
| Hin1I | GRCGYC | 1 cut(s) | 457 |
| Hin1II | CATG | 5 cut(s) | 71, 221, 227, 262, 278 |
| Hin6I | GCGC | 4 cut(s) | 13, 272, 457, 482 |
| HinP1I | GCGC | 4 cut(s) | 13, 272, 457, 482 |
| HindIII | AAGCTT | 1 cut(s) | 53 |
| HinfI | GANTC | 1 cut(s) | 233 |
| HpaII | CCGG | 1 cut(s) | 369 |
| HphI | GGTGA | 2 cut(s) | 242, 458 |
| Hpy188I | TCNGA | 2 cut(s) | 82, 491 |
| Hpy188III | TCNNGA | 1 cut(s) | 224 |
| HpyAV | CCTTC | 2 cut(s) | 187, 401 |
| HpyCH4V | TGCA | 2 cut(s) | 320, 401 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 209 |
| HpyF3I | CTNAG | 2 cut(s) | 35, 243 |
| Hsp92I | GRCGYC | 1 cut(s) | 457 |
| Hsp92II | CATG | 5 cut(s) | 71, 221, 227, 262, 278 |
| HspAI | GCGC | 4 cut(s) | 13, 272, 457, 482 |
| KasI | GGCGCC | 1 cut(s) | 456 |
| LguI | GCTCTTC | 1 cut(s) | 15 |
| LpnPI | CCDG | 2 cut(s) | 358, 382 |
| Lsp1109I | GCAGC | 4 cut(s) | 52, 234, 332, 413 |
| LweI | GCATC | 1 cut(s) | 307 |
| MaeI | CTAG | 2 cut(s) | 204, 324 |
| MaeIII | GTNAC | 1 cut(s) | 230 |
| MboII | GAAGA | 2 cut(s) | 32, 326 |
| Mly113I | GGCGCC | 1 cut(s) | 457 |
| MlyI | GAGTC | 1 cut(s) | 227 |
| MnlI | CCTC | 6 cut(s) | 120, 354, 357, 404, 411, 414 |
| MseI | TTAA | 1 cut(s) | 342 |
| MslI | CAYNNNNRTG | 2 cut(s) | 222, 228 |
| MspA1I | CMGCKG | 1 cut(s) | 247 |
| MspI | CCGG | 1 cut(s) | 369 |
| Mva1269I | GAATGC | 1 cut(s) | 148 |
| MvnI | CGCG | 2 cut(s) | 13, 272 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 209 |
| NarI | GGCGCC | 1 cut(s) | 457 |
| NcoI | CCATGG | 1 cut(s) | 217 |
| NlaIII | CATG | 5 cut(s) | 71, 221, 227, 262, 278 |
| NlaIV | GGNNCC | 1 cut(s) | 458 |
| NmuCI | GTSAC | 1 cut(s) | 230 |
| NspI | RCATGY | 1 cut(s) | 262 |
| NspV | TTCGAA | 1 cut(s) | 388 |
| PagI | TCATGA | 1 cut(s) | 223 |
| PciI | ACATGT | 1 cut(s) | 258 |
| PciSI | GCTCTTC | 1 cut(s) | 15 |
| PctI | GAATGC | 1 cut(s) | 148 |
| PkrI | GCNGC | 4 cut(s) | 42, 249, 322, 403 |
| PleI | GAGTC | 1 cut(s) | 227 |
| PluTI | GGCGCC | 1 cut(s) | 460 |
| PpsI | GAGTC | 1 cut(s) | 227 |
| PscI | ACATGT | 1 cut(s) | 258 |
| PspN4I | GGNNCC | 1 cut(s) | 458 |
| PstI | CTGCAG | 1 cut(s) | 403 |
| PvuII | CAGCTG | 1 cut(s) | 247 |
| RseI | CAYNNNNRTG | 2 cut(s) | 222, 228 |
| SapI | GCTCTTC | 1 cut(s) | 15 |
| SaqAI | TTAA | 1 cut(s) | 342 |
| SatI | GCNGC | 4 cut(s) | 41, 248, 321, 402 |
| SchI | GAGTC | 1 cut(s) | 227 |
| SetI | ASST | 4 cut(s) | 57, 214, 249, 325 |
| SfaNI | GCATC | 1 cut(s) | 307 |
| SfcI | CTRYAG | 1 cut(s) | 399 |
| SfoI | GGCGCC | 1 cut(s) | 458 |
| SfuI | TTCGAA | 1 cut(s) | 388 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 222, 228 |
| SmlI | CTYRAG | 1 cut(s) | 116 |
| SmoI | CTYRAG | 1 cut(s) | 116 |
| SspDI | GGCGCC | 1 cut(s) | 456 |
| SspMI | CTAG | 2 cut(s) | 204, 324 |
| StyI | CCWWGG | 1 cut(s) | 217 |
| TaqI | TCGA | 1 cut(s) | 388 |
| Tru1I | TTAA | 1 cut(s) | 342 |
| Tru9I | TTAA | 1 cut(s) | 342 |
| TseFI | GTSAC | 1 cut(s) | 230 |
| TseI | GCWGC | 4 cut(s) | 40, 247, 320, 401 |
| Tsp45I | GTSAC | 1 cut(s) | 230 |
| TspDTI | ATGAA | 3 cut(s) | 272, 327, 407 |
| XceI | RCATGY | 1 cut(s) | 262 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 224 |
| XspI | CTAG | 2 cut(s) | 204, 324 |