MuDR family transposase
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 549 |
| Acc36I | ACCTGC | 1 cut(s) | 464 |
| AccB1I | GGYRCC | 1 cut(s) | 779 |
| AccI | GTMKAC | 1 cut(s) | 467 |
| AccII | CGCG | 1 cut(s) | 376 |
| AciI | CCGC | 2 cut(s) | 376, 935 |
| AclWI | GGATC | 2 cut(s) | 346, 1400 |
| AcsI | RAATTY | 1 cut(s) | 735 |
| AcuI | CTGAAG | 4 cut(s) | 116, 651, 906, 1145 |
| AfaI | GTAC | 4 cut(s) | 333, 694, 1280, 1309 |
| AhlI | ACTAGT | 1 cut(s) | 56 |
| AjnI | CCWGG | 1 cut(s) | 1006 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 911, 943 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 31, 63 |
| AluBI | AGCT | 7 cut(s) | 627, 641, 722, 1174, 1210, 1446, 1579 |
| AluI | AGCT | 7 cut(s) | 627, 641, 722, 1174, 1210, 1446, 1579 |
| Alw26I | GTCTC | 3 cut(s) | 644, 875, 1224 |
| AlwI | GGATC | 2 cut(s) | 346, 1400 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 884 |
| AoxI | GGCC | 2 cut(s) | 1526, 1538 |
| ApeKI | GCWGC | 3 cut(s) | 818, 1207, 1364 |
| ApoI | RAATTY | 1 cut(s) | 735 |
| AseI | ATTAAT | 2 cut(s) | 354, 1335 |
| AspLEI | GCGC | 1 cut(s) | 1352 |
| AspS9I | GGNCC | 2 cut(s) | 453, 1294 |
| AsuC2I | CCSGG | 1 cut(s) | 660 |
| AsuHPI | GGTGA | 3 cut(s) | 122, 1246, 1580 |
| AvaII | GGWCC | 2 cut(s) | 453, 1294 |
| BanI | GGYRCC | 1 cut(s) | 779 |
| BauI | CACGAG | 1 cut(s) | 498 |
| BbvI | GCAGC | 3 cut(s) | 805, 1219, 1351 |
| BccI | CCATC | 1 cut(s) | 770 |
| BciT130I | CCWGG | 1 cut(s) | 1008 |
| BcnI | CCSGG | 1 cut(s) | 660 |
| BcoDI | GTCTC | 3 cut(s) | 644, 875, 1224 |
| BcuI | ACTAGT | 1 cut(s) | 56 |
| BfaI | CTAG | 3 cut(s) | 57, 107, 264 |
| BfmI | CTRYAG | 1 cut(s) | 1429 |
| BfuAI | ACCTGC | 1 cut(s) | 464 |
| BisI | GCNGC | 3 cut(s) | 819, 1208, 1365 |
| BlpI | GCTNAGC | 1 cut(s) | 1071 |
| BlsI | GCNGC | 3 cut(s) | 820, 1209, 1366 |
| BmcAI | AGTACT | 2 cut(s) | 333, 1280 |
| Bme1390I | CCNGG | 2 cut(s) | 660, 1008 |
| Bme18I | GGWCC | 2 cut(s) | 453, 1294 |
| BmgT120I | GGNCC | 2 cut(s) | 453, 1294 |
| BmiI | GGNNCC | 2 cut(s) | 781, 933 |
| BmrFI | CCNGG | 2 cut(s) | 660, 1008 |
| BmsI | GCATC | 3 cut(s) | 103, 1465, 1568 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1071 |
| BpuMI | CCSGG | 1 cut(s) | 660 |
| BsaI | GGTCTC | 1 cut(s) | 1224 |
| Bse118I | RCCGGY | 1 cut(s) | 1528 |
| Bse1I | ACTGG | 3 cut(s) | 829, 899, 1064 |
| Bse3DI | GCAATG | 1 cut(s) | 198 |
| BseBI | CCWGG | 1 cut(s) | 1008 |
| BseGI | GGATG | 4 cut(s) | 37, 157, 1440, 1480 |
| BseMI | GCAATG | 1 cut(s) | 198 |
| BseMII | CTCAG | 3 cut(s) | 212, 1062, 1485 |
| BseNI | ACTGG | 3 cut(s) | 829, 899, 1064 |
| BseXI | GCAGC | 3 cut(s) | 805, 1219, 1351 |
| BseYI | CCCAGC | 3 cut(s) | 179, 324, 1532 |
| Bsh1236I | CGCG | 1 cut(s) | 376 |
| BshFI | GGCC | 2 cut(s) | 1528, 1540 |
| BshNI | GGYRCC | 1 cut(s) | 779 |
| BsiSI | CCGG | 2 cut(s) | 659, 1529 |
| BsmAI | GTCTC | 3 cut(s) | 644, 875, 1224 |
| BsnI | GGCC | 2 cut(s) | 1528, 1540 |
| Bso31I | GGTCTC | 1 cut(s) | 1224 |
| Bsp143I | GATC | 5 cut(s) | 338, 504, 994, 1102, 1405 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1071 |
| BspACI | CCGC | 2 cut(s) | 376, 935 |
| BspANI | GGCC | 2 cut(s) | 1528, 1540 |
| BspCNI | CTCAG | 3 cut(s) | 213, 1063, 1486 |
| BspFNI | CGCG | 1 cut(s) | 376 |
| BspHI | TCATGA | 1 cut(s) | 507 |
| BspLI | GGNNCC | 2 cut(s) | 781, 933 |
| BspMI | ACCTGC | 1 cut(s) | 464 |
| BspPI | GGATC | 2 cut(s) | 346, 1400 |
| BspT107I | GGYRCC | 1 cut(s) | 779 |
| BspTNI | GGTCTC | 1 cut(s) | 1224 |
| BsrDI | GCAATG | 1 cut(s) | 198 |
| BsrFI | RCCGGY | 1 cut(s) | 1528 |
| BsrI | ACTGG | 3 cut(s) | 829, 899, 1064 |
| BssAI | RCCGGY | 1 cut(s) | 1528 |
| BssMI | GATC | 5 cut(s) | 338, 504, 994, 1102, 1405 |
| BssSI | CACGAG | 1 cut(s) | 498 |
| Bst2BI | CACGAG | 1 cut(s) | 498 |
| Bst2UI | CCWGG | 1 cut(s) | 1008 |
| Bst4CI | ACNGT | 3 cut(s) | 320, 472, 1420 |
| Bst6I | CTCTTC | 1 cut(s) | 1187 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1364 |
| BstC8I | GCNNGC | 1 cut(s) | 1530 |
| BstDEI | CTNAG | 3 cut(s) | 221, 1071, 1494 |
| BstF5I | GGATG | 4 cut(s) | 37, 157, 1440, 1480 |
| BstFNI | CGCG | 1 cut(s) | 376 |
| BstHHI | GCGC | 1 cut(s) | 1352 |
| BstKTI | GATC | 5 cut(s) | 341, 507, 997, 1105, 1408 |
| BstMAI | GTCTC | 3 cut(s) | 644, 875, 1224 |
| BstMBI | GATC | 5 cut(s) | 338, 504, 994, 1102, 1405 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 296, 563, 1081, 1204, 1347, 1364 |
| BstNI | CCWGG | 1 cut(s) | 1008 |
| BstNSI | RCATGY | 2 cut(s) | 179, 399 |
| BstSCI | CCNGG | 2 cut(s) | 658, 1006 |
| BstSFI | CTRYAG | 1 cut(s) | 1429 |
| BstUI | CGCG | 1 cut(s) | 376 |
| BstV1I | GCAGC | 3 cut(s) | 805, 1219, 1351 |
| BstX2I | RGATCY | 1 cut(s) | 338 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 740 |
| BstYI | RGATCY | 1 cut(s) | 338 |
| BsuRI | GGCC | 2 cut(s) | 1528, 1540 |
| BtsCI | GGATG | 4 cut(s) | 37, 157, 1440, 1480 |
| BtsI | GCAGTG | 1 cut(s) | 1079 |
| BtsIMutI | CAGTG | 4 cut(s) | 316, 365, 1079, 1491 |
| BveI | ACCTGC | 1 cut(s) | 464 |
| Cac8I | GCNNGC | 1 cut(s) | 1530 |
| CaiI | CAGNNNCTG | 1 cut(s) | 884 |
| CciI | TCATGA | 1 cut(s) | 507 |
| CfoI | GCGC | 1 cut(s) | 1352 |
| Cfr10I | RCCGGY | 1 cut(s) | 1528 |
| Cfr13I | GGNCC | 2 cut(s) | 453, 1294 |
| Csp6I | GTAC | 4 cut(s) | 332, 693, 1279, 1308 |
| CviAII | CATG | 8 cut(s) | 176, 396, 508, 740, 1247, 1317, 1347, 1355 |
| CviQI | GTAC | 4 cut(s) | 332, 693, 1279, 1308 |
| DdeI | CTNAG | 3 cut(s) | 221, 1071, 1494 |
| DpnI | GATC | 5 cut(s) | 340, 506, 996, 1104, 1407 |
| DpnII | GATC | 5 cut(s) | 338, 504, 994, 1102, 1405 |
| DraI | TTTAAA | 1 cut(s) | 706 |
| Eam1104I | CTCTTC | 1 cut(s) | 1187 |
| EarI | CTCTTC | 1 cut(s) | 1187 |
| Eco147I | AGGCCT | 1 cut(s) | 1540 |
| Eco31I | GGTCTC | 1 cut(s) | 1224 |
| Eco47I | GGWCC | 2 cut(s) | 453, 1294 |
| Eco57I | CTGAAG | 4 cut(s) | 116, 651, 906, 1145 |
| EcoO109I | RGGNCCY | 1 cut(s) | 453 |
| EcoRII | CCWGG | 1 cut(s) | 1006 |
| FaeI | CATG | 8 cut(s) | 179, 399, 511, 743, 1250, 1320, 1350, 1358 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1194, 1226 |
| FatI | CATG | 8 cut(s) | 175, 395, 507, 739, 1246, 1316, 1346, 1354 |
| FblI | GTMKAC | 1 cut(s) | 467 |
| Fnu4HI | GCNGC | 3 cut(s) | 819, 1208, 1365 |
| FokI | GGATG | 4 cut(s) | 44, 164, 1447, 1487 |
| Fsp4HI | GCNGC | 3 cut(s) | 819, 1208, 1365 |
| FspBI | CTAG | 3 cut(s) | 57, 107, 264 |
| GlaI | GCGC | 1 cut(s) | 1351 |
| GluI | GCNGC | 3 cut(s) | 819, 1208, 1365 |
| GsaI | CCCAGC | 3 cut(s) | 183, 328, 1536 |
| HaeIII | GGCC | 2 cut(s) | 1528, 1540 |
| HapII | CCGG | 2 cut(s) | 659, 1529 |
| HhaI | GCGC | 1 cut(s) | 1352 |
| Hin1II | CATG | 8 cut(s) | 179, 399, 511, 743, 1250, 1320, 1350, 1358 |
| Hin6I | GCGC | 1 cut(s) | 1350 |
| HinP1I | GCGC | 1 cut(s) | 1350 |
| HincII | GTYRAC | 1 cut(s) | 313 |
| HindII | GTYRAC | 1 cut(s) | 313 |
| HindIII | AAGCTT | 1 cut(s) | 1172 |
| HinfI | GANTC | 9 cut(s) | 272, 415, 464, 481, 608, 811, 875, 1046, 1151 |
| HpaII | CCGG | 2 cut(s) | 659, 1529 |
| HphI | GGTGA | 3 cut(s) | 122, 1246, 1580 |
| Hpy166II | GTNNAC | 5 cut(s) | 248, 313, 468, 525, 1079 |
| Hpy188I | TCNGA | 5 cut(s) | 135, 151, 601, 880, 1138 |
| Hpy188III | TCNNGA | 6 cut(s) | 37, 305, 500, 508, 561, 677 |
| Hpy8I | GTNNAC | 5 cut(s) | 248, 313, 468, 525, 1079 |
| HpyAV | CCTTC | 4 cut(s) | 405, 913, 936, 979 |
| HpyCH4III | ACNGT | 3 cut(s) | 320, 472, 1420 |
| HpyCH4IV | ACGT | 2 cut(s) | 282, 1470 |
| HpyCH4V | TGCA | 8 cut(s) | 203, 299, 399, 459, 821, 1358, 1379, 1457 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 296, 563, 1081, 1204, 1347, 1364 |
| HpyF3I | CTNAG | 3 cut(s) | 221, 1071, 1494 |
| HpySE526I | ACGT | 2 cut(s) | 282, 1470 |
| Hsp92II | CATG | 8 cut(s) | 179, 399, 511, 743, 1250, 1320, 1350, 1358 |
| HspAI | GCGC | 1 cut(s) | 1350 |
| KroI | GCCGGC | 1 cut(s) | 1528 |
| KroNI | GCCGGC | 1 cut(s) | 1530 |
| Kzo9I | GATC | 5 cut(s) | 338, 504, 994, 1102, 1405 |
| Lsp1109I | GCAGC | 3 cut(s) | 805, 1219, 1351 |
| LweI | GCATC | 3 cut(s) | 103, 1465, 1568 |
| MaeI | CTAG | 3 cut(s) | 57, 107, 264 |
| MaeII | ACGT | 2 cut(s) | 282, 1470 |
| MaeIII | GTNAC | 3 cut(s) | 171, 1466, 1516 |
| MalI | GATC | 5 cut(s) | 340, 506, 996, 1104, 1407 |
| MboI | GATC | 5 cut(s) | 338, 504, 994, 1102, 1405 |
| MboII | GAAGA | 9 cut(s) | 657, 840, 841, 898, 899, 1138, 1204, 1479, 1585 |
| MflI | RGATCY | 1 cut(s) | 338 |
| MluCI | AATT | 7 cut(s) | 276, 431, 444, 514, 540, 735, 1336 |
| MlyI | GAGTC | 2 cut(s) | 473, 1160 |
| MmeI | TCCRAC | 3 cut(s) | 129, 627, 909 |
| MroNI | GCCGGC | 1 cut(s) | 1528 |
| MseI | TTAA | 8 cut(s) | 120, 285, 354, 381, 623, 705, 1053, 1335 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1251 |
| MspI | CCGG | 2 cut(s) | 659, 1529 |
| MspR9I | CCNGG | 2 cut(s) | 660, 1008 |
| MvaI | CCWGG | 1 cut(s) | 1008 |
| MvnI | CGCG | 1 cut(s) | 376 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 296, 563, 1081, 1204, 1347, 1364 |
| NaeI | GCCGGC | 1 cut(s) | 1530 |
| NciI | CCSGG | 1 cut(s) | 660 |
| NdeII | GATC | 5 cut(s) | 338, 504, 994, 1102, 1405 |
| NgoMIV | GCCGGC | 1 cut(s) | 1528 |
| NlaIII | CATG | 8 cut(s) | 179, 399, 511, 743, 1250, 1320, 1350, 1358 |
| NlaIV | GGNNCC | 2 cut(s) | 781, 933 |
| NmuCI | GTSAC | 1 cut(s) | 171 |
| NspI | RCATGY | 2 cut(s) | 179, 399 |
| PagI | TCATGA | 1 cut(s) | 507 |
| PceI | AGGCCT | 1 cut(s) | 1540 |
| PdiI | GCCGGC | 1 cut(s) | 1530 |
| PfeI | GAWTC | 7 cut(s) | 272, 415, 481, 608, 811, 875, 1046 |
| PkrI | GCNGC | 3 cut(s) | 820, 1209, 1366 |
| PleI | GAGTC | 2 cut(s) | 472, 1159 |
| PpsI | GAGTC | 2 cut(s) | 472, 1159 |
| PpuMI | RGGWCCY | 1 cut(s) | 453 |
| PshBI | ATTAAT | 2 cut(s) | 354, 1335 |
| PsiI | TTATAA | 1 cut(s) | 549 |
| Psp5II | RGGWCCY | 1 cut(s) | 453 |
| Psp6I | CCWGG | 1 cut(s) | 1006 |
| PspFI | CCCAGC | 3 cut(s) | 179, 324, 1532 |
| PspGI | CCWGG | 1 cut(s) | 1006 |
| PspN4I | GGNNCC | 2 cut(s) | 781, 933 |
| PspPI | GGNCC | 2 cut(s) | 453, 1294 |
| PspPPI | RGGWCCY | 1 cut(s) | 453 |
| PstNI | CAGNNNCTG | 1 cut(s) | 884 |
| PsuI | RGATCY | 1 cut(s) | 338 |
| RsaI | GTAC | 4 cut(s) | 333, 694, 1280, 1309 |
| RsaNI | GTAC | 4 cut(s) | 332, 693, 1279, 1308 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1251 |
| SaqAI | TTAA | 8 cut(s) | 120, 285, 354, 381, 623, 705, 1053, 1335 |
| SatI | GCNGC | 3 cut(s) | 819, 1208, 1365 |
| Sau3AI | GATC | 5 cut(s) | 338, 504, 994, 1102, 1405 |
| Sau96I | GGNCC | 2 cut(s) | 453, 1294 |
| ScaI | AGTACT | 2 cut(s) | 333, 1280 |
| SchI | GAGTC | 2 cut(s) | 473, 1160 |
| ScrFI | CCNGG | 2 cut(s) | 660, 1008 |
| SfaNI | GCATC | 3 cut(s) | 103, 1465, 1568 |
| SfcI | CTRYAG | 1 cut(s) | 1429 |
| SinI | GGWCC | 2 cut(s) | 453, 1294 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1251 |
| SpeI | ACTAGT | 1 cut(s) | 56 |
| Sse9I | AATT | 7 cut(s) | 276, 431, 444, 514, 540, 735, 1336 |
| SseBI | AGGCCT | 1 cut(s) | 1540 |
| SsiI | CCGC | 2 cut(s) | 376, 935 |
| SspI | AATATT | 1 cut(s) | 388 |
| SspMI | CTAG | 3 cut(s) | 57, 107, 264 |
| StuI | AGGCCT | 1 cut(s) | 1540 |
| StyD4I | CCNGG | 2 cut(s) | 658, 1006 |
| TaaI | ACNGT | 3 cut(s) | 320, 472, 1420 |
| TaiI | ACGT | 2 cut(s) | 285, 1473 |
| TaqI | TCGA | 1 cut(s) | 1154 |
| TasI | AATT | 7 cut(s) | 276, 431, 444, 514, 540, 735, 1336 |
| TatI | WGTACW | 2 cut(s) | 331, 1278 |
| TfiI | GAWTC | 7 cut(s) | 272, 415, 481, 608, 811, 875, 1046 |
| Tru1I | TTAA | 8 cut(s) | 120, 285, 354, 381, 623, 705, 1053, 1335 |
| Tru9I | TTAA | 8 cut(s) | 120, 285, 354, 381, 623, 705, 1053, 1335 |
| TscAI | CASTG | 4 cut(s) | 323, 365, 1086, 1498 |
| TseFI | GTSAC | 1 cut(s) | 171 |
| TseI | GCWGC | 3 cut(s) | 818, 1207, 1364 |
| Tsp45I | GTSAC | 1 cut(s) | 171 |
| TspRI | CASTG | 4 cut(s) | 323, 365, 1086, 1498 |
| VpaK11BI | GGWCC | 2 cut(s) | 453, 1294 |
| VspI | ATTAAT | 2 cut(s) | 354, 1335 |
| XapI | RAATTY | 1 cut(s) | 735 |
| XceI | RCATGY | 2 cut(s) | 179, 399 |
| XmiI | GTMKAC | 1 cut(s) | 467 |
| XspI | CTAG | 3 cut(s) | 57, 107, 264 |
| ZrmI | AGTACT | 2 cut(s) | 333, 1280 |