isoform X1
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 754 |
| AccII | CGCG | 1 cut(s) | 1094 |
| AccIII | TCCGGA | 1 cut(s) | 706 |
| AciI | CCGC | 2 cut(s) | 488, 745 |
| AclWI | GGATC | 5 cut(s) | 581, 594, 685, 1145, 1237 |
| AcsI | RAATTY | 1 cut(s) | 604 |
| AcuI | CTGAAG | 2 cut(s) | 284, 339 |
| AfaI | GTAC | 3 cut(s) | 257, 340, 774 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 482, 596, 754, 954 |
| AflIII | ACRYGT | 1 cut(s) | 1014 |
| AluBI | AGCT | 7 cut(s) | 62, 317, 422, 458, 532, 1123, 1191 |
| AluI | AGCT | 7 cut(s) | 62, 317, 422, 458, 532, 1123, 1191 |
| Alw26I | GTCTC | 3 cut(s) | 644, 708, 1023 |
| AlwI | GGATC | 5 cut(s) | 581, 594, 685, 1145, 1237 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1108 |
| Ama87I | CYCGRG | 1 cut(s) | 860 |
| Aor13HI | TCCGGA | 1 cut(s) | 706 |
| AoxI | GGCC | 4 cut(s) | 394, 520, 1039, 1051 |
| ApeKI | GCWGC | 1 cut(s) | 727 |
| ApoI | RAATTY | 1 cut(s) | 604 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 613, 645 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 290, 540 |
| AspS9I | GGNCC | 3 cut(s) | 395, 521, 1183 |
| AsuHPI | GGTGA | 2 cut(s) | 146, 437 |
| AsuII | TTCGAA | 1 cut(s) | 778 |
| AvaI | CYCGRG | 1 cut(s) | 860 |
| AvaII | GGWCC | 1 cut(s) | 1183 |
| AxyI | CCTNAGG | 1 cut(s) | 690 |
| BamHI | GGATCC | 1 cut(s) | 586 |
| BbsI | GAAGAC | 1 cut(s) | 3 |
| BbvI | GCAGC | 1 cut(s) | 714 |
| BccI | CCATC | 3 cut(s) | 395, 587, 1007 |
| BclI | TGATCA | 1 cut(s) | 193 |
| BcoDI | GTCTC | 3 cut(s) | 644, 708, 1023 |
| BfmI | CTRYAG | 1 cut(s) | 728 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 402 |
| BglII | AGATCT | 2 cut(s) | 538, 917 |
| BisI | GCNGC | 1 cut(s) | 728 |
| BlsI | GCNGC | 1 cut(s) | 729 |
| Bme18I | GGWCC | 1 cut(s) | 1183 |
| BmeT110I | CYCGRG | 1 cut(s) | 860 |
| BmgT120I | GGNCC | 3 cut(s) | 395, 521, 1183 |
| BmiI | GGNNCC | 3 cut(s) | 309, 474, 588 |
| BmrI | ACTGGG | 1 cut(s) | 518 |
| BmsI | GCATC | 2 cut(s) | 251, 291 |
| BmuI | ACTGGG | 1 cut(s) | 518 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1181 |
| BpiI | GAAGAC | 1 cut(s) | 3 |
| BpmI | CTGGAG | 1 cut(s) | 71 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1187 |
| Bpu14I | TTCGAA | 1 cut(s) | 778 |
| BpuEI | CTTGAG | 2 cut(s) | 574, 872 |
| Bsa29I | ATCGAT | 1 cut(s) | 564 |
| BsaBI | GATNNNNATC | 2 cut(s) | 171, 922 |
| BsaI | GGTCTC | 1 cut(s) | 708 |
| BsaJI | CCNNGG | 2 cut(s) | 885, 936 |
| BsaWI | WCCGGW | 1 cut(s) | 706 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 482, 596, 754, 954 |
| Bse1I | ACTGG | 3 cut(s) | 157, 524, 1102 |
| Bse21I | CCTNAGG | 1 cut(s) | 690 |
| Bse3DI | GCAATG | 1 cut(s) | 653 |
| Bse8I | GATNNNNATC | 2 cut(s) | 171, 922 |
| BseAI | TCCGGA | 1 cut(s) | 706 |
| BseCI | ATCGAT | 1 cut(s) | 564 |
| BseDI | CCNNGG | 2 cut(s) | 885, 936 |
| BseGI | GGATG | 3 cut(s) | 306, 881, 946 |
| BseJI | GATNNNNATC | 2 cut(s) | 171, 922 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 482, 596, 754, 954 |
| BseMI | GCAATG | 1 cut(s) | 653 |
| BseMII | CTCAG | 5 cut(s) | 420, 681, 815, 1193, 1230 |
| BseNI | ACTGG | 3 cut(s) | 157, 524, 1102 |
| BseRI | GAGGAG | 2 cut(s) | 152, 1011 |
| BseXI | GCAGC | 1 cut(s) | 714 |
| BseYI | CCCAGC | 1 cut(s) | 581 |
| BsgI | GTGCAG | 1 cut(s) | 591 |
| Bsh1236I | CGCG | 1 cut(s) | 1094 |
| Bsh1285I | CGRYCG | 2 cut(s) | 368, 568 |
| BshFI | GGCC | 4 cut(s) | 396, 522, 1041, 1053 |
| BshVI | ATCGAT | 1 cut(s) | 564 |
| BsiEI | CGRYCG | 2 cut(s) | 368, 568 |
| BsiHKCI | CYCGRG | 1 cut(s) | 860 |
| BsiSI | CCGG | 1 cut(s) | 707 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 482, 596, 754, 954 |
| BsmAI | GTCTC | 3 cut(s) | 644, 708, 1023 |
| BsnI | GGCC | 4 cut(s) | 396, 522, 1041, 1053 |
| Bso31I | GGTCTC | 1 cut(s) | 708 |
| BsoBI | CYCGRG | 1 cut(s) | 860 |
| Bsp119I | TTCGAA | 1 cut(s) | 778 |
| Bsp13I | TCCGGA | 1 cut(s) | 706 |
| Bsp1407I | TGTACA | 1 cut(s) | 255 |
| Bsp143I | GATC | 9 cut(s) | 166, 193, 538, 565, 586, 677, 917, 1137, 1229 |
| Bsp19I | CCATGG | 1 cut(s) | 936 |
| Bsp68I | TCGCGA | 1 cut(s) | 1094 |
| BspACI | CCGC | 2 cut(s) | 488, 745 |
| BspANI | GGCC | 4 cut(s) | 396, 522, 1041, 1053 |
| BspCNI | CTCAG | 5 cut(s) | 419, 682, 814, 1192, 1229 |
| BspDI | ATCGAT | 1 cut(s) | 564 |
| BspEI | TCCGGA | 1 cut(s) | 706 |
| BspFNI | CGCG | 1 cut(s) | 1094 |
| BspLI | GGNNCC | 3 cut(s) | 309, 474, 588 |
| BspMAI | CTGCAG | 1 cut(s) | 732 |
| BspPI | GGATC | 5 cut(s) | 581, 594, 685, 1145, 1237 |
| BspT104I | TTCGAA | 1 cut(s) | 778 |
| BspTNI | GGTCTC | 1 cut(s) | 708 |
| BsrDI | GCAATG | 1 cut(s) | 653 |
| BsrGI | TGTACA | 1 cut(s) | 255 |
| BsrI | ACTGG | 3 cut(s) | 157, 524, 1102 |
| BssECI | CCNNGG | 2 cut(s) | 885, 936 |
| BssMI | GATC | 9 cut(s) | 166, 193, 538, 565, 586, 677, 917, 1137, 1229 |
| BssT1I | CCWWGG | 1 cut(s) | 936 |
| Bst4CI | ACNGT | 2 cut(s) | 333, 838 |
| Bst6I | CTCTTC | 2 cut(s) | 369, 517 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 578 |
| BstAUI | TGTACA | 1 cut(s) | 255 |
| BstBI | TTCGAA | 1 cut(s) | 778 |
| BstDEI | CTNAG | 7 cut(s) | 406, 690, 801, 1124, 1179, 1187, 1216 |
| BstDSI | CCRYGG | 1 cut(s) | 936 |
| BstF5I | GGATG | 3 cut(s) | 306, 881, 946 |
| BstFNI | CGCG | 1 cut(s) | 1094 |
| BstKTI | GATC | 9 cut(s) | 169, 196, 541, 568, 589, 680, 920, 1140, 1232 |
| BstMAI | GTCTC | 3 cut(s) | 644, 708, 1023 |
| BstMBI | GATC | 9 cut(s) | 166, 193, 538, 565, 586, 677, 917, 1137, 1229 |
| BstMCI | CGRYCG | 2 cut(s) | 368, 568 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 402, 578 |
| BstNSI | RCATGY | 2 cut(s) | 1018, 1035 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1181 |
| BstSFI | CTRYAG | 1 cut(s) | 728 |
| BstUI | CGCG | 1 cut(s) | 1094 |
| BstV1I | GCAGC | 1 cut(s) | 714 |
| BstV2I | GAAGAC | 1 cut(s) | 3 |
| BstX2I | RGATCY | 4 cut(s) | 538, 586, 677, 917 |
| BstYI | RGATCY | 4 cut(s) | 538, 586, 677, 917 |
| Bsu15I | ATCGAT | 1 cut(s) | 564 |
| Bsu36I | CCTNAGG | 1 cut(s) | 690 |
| BsuRI | GGCC | 4 cut(s) | 396, 522, 1041, 1053 |
| BsuTUI | ATCGAT | 1 cut(s) | 564 |
| BtgI | CCRYGG | 1 cut(s) | 936 |
| BtgZI | GCGATG | 1 cut(s) | 516 |
| BtsCI | GGATG | 3 cut(s) | 306, 881, 946 |
| BtsI | GCAGTG | 1 cut(s) | 659 |
| BtsIMutI | CAGTG | 3 cut(s) | 164, 531, 659 |
| BtuMI | TCGCGA | 1 cut(s) | 1094 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1108 |
| Cfr13I | GGNCC | 3 cut(s) | 395, 521, 1183 |
| ClaI | ATCGAT | 1 cut(s) | 564 |
| CseI | GACGC | 1 cut(s) | 29 |
| Csp6I | GTAC | 3 cut(s) | 256, 339, 773 |
| CviAII | CATG | 3 cut(s) | 937, 1015, 1032 |
| CviQI | GTAC | 3 cut(s) | 256, 339, 773 |
| DdeI | CTNAG | 7 cut(s) | 406, 690, 801, 1124, 1179, 1187, 1216 |
| DpnI | GATC | 9 cut(s) | 168, 195, 540, 567, 588, 679, 919, 1139, 1231 |
| DpnII | GATC | 9 cut(s) | 166, 193, 538, 565, 586, 677, 917, 1137, 1229 |
| Eam1104I | CTCTTC | 2 cut(s) | 369, 517 |
| EarI | CTCTTC | 2 cut(s) | 369, 517 |
| EciI | GGCGGA | 1 cut(s) | 734 |
| Eco130I | CCWWGG | 1 cut(s) | 936 |
| Eco31I | GGTCTC | 1 cut(s) | 708 |
| Eco47I | GGWCC | 1 cut(s) | 1183 |
| Eco57I | CTGAAG | 2 cut(s) | 284, 339 |
| Eco81I | CCTNAGG | 1 cut(s) | 690 |
| Eco88I | CYCGRG | 1 cut(s) | 860 |
| EcoO109I | RGGNCCY | 2 cut(s) | 395, 1183 |
| EcoT14I | CCWWGG | 1 cut(s) | 936 |
| ErhI | CCWWGG | 1 cut(s) | 936 |
| FaeI | CATG | 3 cut(s) | 940, 1018, 1035 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 278, 310, 366, 398 |
| FatI | CATG | 3 cut(s) | 936, 1014, 1031 |
| FauNDI | CATATG | 1 cut(s) | 968 |
| FbaI | TGATCA | 1 cut(s) | 193 |
| Fnu4HI | GCNGC | 1 cut(s) | 728 |
| FokI | GGATG | 3 cut(s) | 313, 868, 953 |
| Fsp4HI | GCNGC | 1 cut(s) | 728 |
| GluI | GCNGC | 1 cut(s) | 728 |
| GsaI | CCCAGC | 1 cut(s) | 585 |
| GsuI | CTGGAG | 1 cut(s) | 71 |
| HaeIII | GGCC | 4 cut(s) | 396, 522, 1041, 1053 |
| HapII | CCGG | 1 cut(s) | 707 |
| HgaI | GACGC | 1 cut(s) | 29 |
| Hin1II | CATG | 3 cut(s) | 940, 1018, 1035 |
| HpaII | CCGG | 1 cut(s) | 707 |
| HphI | GGTGA | 2 cut(s) | 146, 437 |
| Hpy166II | GTNNAC | 3 cut(s) | 256, 737, 834 |
| Hpy188I | TCNGA | 6 cut(s) | 171, 198, 886, 922, 1006, 1171 |
| Hpy188III | TCNNGA | 9 cut(s) | 98, 209, 246, 453, 553, 590, 707, 851, 1093 |
| Hpy8I | GTNNAC | 3 cut(s) | 256, 737, 834 |
| Hpy99I | CGWCG | 1 cut(s) | 23 |
| HpyAV | CCTTC | 2 cut(s) | 243, 386 |
| HpyCH4III | ACNGT | 2 cut(s) | 333, 838 |
| HpyCH4V | TGCA | 9 cut(s) | 37, 151, 304, 572, 664, 730, 898, 988, 1208 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 402, 578 |
| HpyF3I | CTNAG | 7 cut(s) | 406, 690, 801, 1124, 1179, 1187, 1216 |
| Hsp92II | CATG | 3 cut(s) | 940, 1018, 1035 |
| Kpn2I | TCCGGA | 1 cut(s) | 706 |
| Ksp22I | TGATCA | 1 cut(s) | 193 |
| Kzo9I | GATC | 9 cut(s) | 166, 193, 538, 565, 586, 677, 917, 1137, 1229 |
| LmnI | GCTCC | 1 cut(s) | 307 |
| Lsp1109I | GCAGC | 1 cut(s) | 714 |
| LweI | GCATC | 2 cut(s) | 251, 291 |
| MaeIII | GTNAC | 4 cut(s) | 505, 557, 1104, 1236 |
| MalI | GATC | 9 cut(s) | 168, 195, 540, 567, 588, 679, 919, 1139, 1231 |
| MboI | GATC | 9 cut(s) | 166, 193, 538, 565, 586, 677, 917, 1137, 1229 |
| MflI | RGATCY | 4 cut(s) | 538, 586, 677, 917 |
| MluCI | AATT | 5 cut(s) | 42, 349, 604, 766, 982 |
| MlyI | GAGTC | 3 cut(s) | 742, 793, 1171 |
| MmeI | TCCRAC | 1 cut(s) | 939 |
| MroI | TCCGGA | 1 cut(s) | 706 |
| MroXI | GAANNNNTTC | 2 cut(s) | 290, 540 |
| MseI | TTAA | 5 cut(s) | 234, 348, 914, 995, 1067 |
| MslI | CAYNNNNRTG | 1 cut(s) | 334 |
| MspA1I | CMGCKG | 1 cut(s) | 422 |
| MspI | CCGG | 1 cut(s) | 707 |
| MvnI | CGCG | 1 cut(s) | 1094 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 402, 578 |
| NcoI | CCATGG | 1 cut(s) | 936 |
| NdeI | CATATG | 1 cut(s) | 968 |
| NdeII | GATC | 9 cut(s) | 166, 193, 538, 565, 586, 677, 917, 1137, 1229 |
| NlaIII | CATG | 3 cut(s) | 940, 1018, 1035 |
| NlaIV | GGNNCC | 3 cut(s) | 309, 474, 588 |
| NmuCI | GTSAC | 1 cut(s) | 1236 |
| NruI | TCGCGA | 1 cut(s) | 1094 |
| NspI | RCATGY | 2 cut(s) | 1018, 1035 |
| NspV | TTCGAA | 1 cut(s) | 778 |
| PaeR7I | CTCGAG | 1 cut(s) | 860 |
| PciI | ACATGT | 1 cut(s) | 1014 |
| PdmI | GAANNNNTTC | 2 cut(s) | 290, 540 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 754 |
| PkrI | GCNGC | 1 cut(s) | 729 |
| Ple19I | CGATCG | 1 cut(s) | 568 |
| PleI | GAGTC | 3 cut(s) | 741, 793, 1171 |
| PpsI | GAGTC | 3 cut(s) | 741, 793, 1171 |
| PpuMI | RGGWCCY | 1 cut(s) | 1183 |
| PscI | ACATGT | 1 cut(s) | 1014 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1181 |
| Psp5II | RGGWCCY | 1 cut(s) | 1183 |
| PspFI | CCCAGC | 1 cut(s) | 581 |
| PspN4I | GGNNCC | 3 cut(s) | 309, 474, 588 |
| PspPI | GGNCC | 3 cut(s) | 395, 521, 1183 |
| PspPPI | RGGWCCY | 1 cut(s) | 1183 |
| PspXI | VCTCGAGB | 1 cut(s) | 860 |
| PstI | CTGCAG | 1 cut(s) | 732 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1108 |
| PsuI | RGATCY | 4 cut(s) | 538, 586, 677, 917 |
| PvuI | CGATCG | 1 cut(s) | 568 |
| PvuII | CAGCTG | 1 cut(s) | 422 |
| RruI | TCGCGA | 1 cut(s) | 1094 |
| RsaI | GTAC | 3 cut(s) | 257, 340, 774 |
| RsaNI | GTAC | 3 cut(s) | 256, 339, 773 |
| RseI | CAYNNNNRTG | 1 cut(s) | 334 |
| SaqAI | TTAA | 5 cut(s) | 234, 348, 914, 995, 1067 |
| SatI | GCNGC | 1 cut(s) | 728 |
| Sau3AI | GATC | 9 cut(s) | 166, 193, 538, 565, 586, 677, 917, 1137, 1229 |
| Sau96I | GGNCC | 3 cut(s) | 395, 521, 1183 |
| SchI | GAGTC | 3 cut(s) | 742, 793, 1171 |
| SfaNI | GCATC | 2 cut(s) | 251, 291 |
| SfcI | CTRYAG | 1 cut(s) | 728 |
| Sfr274I | CTCGAG | 1 cut(s) | 860 |
| SfuI | TTCGAA | 1 cut(s) | 778 |
| SinI | GGWCC | 1 cut(s) | 1183 |
| SlaI | CTCGAG | 1 cut(s) | 860 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 334 |
| SmlI | CTYRAG | 3 cut(s) | 553, 851, 860 |
| SmoI | CTYRAG | 3 cut(s) | 553, 851, 860 |
| Sse9I | AATT | 5 cut(s) | 42, 349, 604, 766, 982 |
| SsiI | CCGC | 2 cut(s) | 488, 745 |
| StyI | CCWWGG | 1 cut(s) | 936 |
| TaaI | ACNGT | 2 cut(s) | 333, 838 |
| TaqI | TCGA | 5 cut(s) | 58, 364, 564, 778, 861 |
| TaqII | GACCGA | 1 cut(s) | 382 |
| TasI | AATT | 5 cut(s) | 42, 349, 604, 766, 982 |
| TatI | WGTACW | 2 cut(s) | 255, 772 |
| Tru1I | TTAA | 5 cut(s) | 234, 348, 914, 995, 1067 |
| Tru9I | TTAA | 5 cut(s) | 234, 348, 914, 995, 1067 |
| TscAI | CASTG | 3 cut(s) | 164, 531, 666 |
| TseFI | GTSAC | 1 cut(s) | 1236 |
| TseI | GCWGC | 1 cut(s) | 727 |
| Tsp45I | GTSAC | 1 cut(s) | 1236 |
| TspDTI | ATGAA | 5 cut(s) | 438, 504, 750, 957, 1077 |
| TspGWI | ACGGA | 1 cut(s) | 334 |
| TspRI | CASTG | 3 cut(s) | 164, 531, 666 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 754 |
| VpaK11BI | GGWCC | 1 cut(s) | 1183 |
| XapI | RAATTY | 1 cut(s) | 604 |
| XceI | RCATGY | 2 cut(s) | 1018, 1035 |
| XhoI | CTCGAG | 1 cut(s) | 860 |
| XmnI | GAANNNNTTC | 2 cut(s) | 290, 540 |