isoform X1
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 92 |
| AciI | CCGC | 1 cut(s) | 6 |
| AfaI | GTAC | 1 cut(s) | 149 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 94 |
| AgsI | TTSAA | 1 cut(s) | 34 |
| AluBI | AGCT | 2 cut(s) | 143, 159 |
| AluI | AGCT | 2 cut(s) | 143, 159 |
| AoxI | GGCC | 1 cut(s) | 133 |
| ApeKI | GCWGC | 1 cut(s) | 159 |
| BbvI | GCAGC | 1 cut(s) | 146 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 38, 72 |
| BglII | AGATCT | 1 cut(s) | 102 |
| BisI | GCNGC | 1 cut(s) | 160 |
| BlsI | GCNGC | 1 cut(s) | 161 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 94 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 94 |
| BseMII | CTCAG | 1 cut(s) | 153 |
| BseXI | GCAGC | 1 cut(s) | 146 |
| Bsh1236I | CGCG | 1 cut(s) | 92 |
| BshFI | GGCC | 1 cut(s) | 135 |
| BslFI | GGGAC | 1 cut(s) | 74 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 94 |
| BsmFI | GGGAC | 1 cut(s) | 74 |
| BsnI | GGCC | 1 cut(s) | 135 |
| Bsp143I | GATC | 1 cut(s) | 102 |
| Bsp68I | TCGCGA | 1 cut(s) | 92 |
| BspACI | CCGC | 1 cut(s) | 6 |
| BspANI | GGCC | 1 cut(s) | 135 |
| BspCNI | CTCAG | 1 cut(s) | 152 |
| BspFNI | CGCG | 1 cut(s) | 92 |
| BssMI | GATC | 1 cut(s) | 102 |
| Bst4CI | ACNGT | 1 cut(s) | 28 |
| BstC8I | GCNNGC | 1 cut(s) | 123 |
| BstDEI | CTNAG | 1 cut(s) | 139 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 92 |
| BstFNI | CGCG | 1 cut(s) | 92 |
| BstKTI | GATC | 1 cut(s) | 105 |
| BstMBI | GATC | 1 cut(s) | 102 |
| BstUI | CGCG | 1 cut(s) | 92 |
| BstV1I | GCAGC | 1 cut(s) | 146 |
| BstX2I | RGATCY | 1 cut(s) | 102 |
| BstYI | RGATCY | 1 cut(s) | 102 |
| BsuRI | GGCC | 1 cut(s) | 135 |
| BtgZI | GCGATG | 1 cut(s) | 25 |
| BtsIMutI | CAGTG | 1 cut(s) | 24 |
| BtuMI | TCGCGA | 1 cut(s) | 92 |
| Cac8I | GCNNGC | 1 cut(s) | 123 |
| Csp6I | GTAC | 1 cut(s) | 148 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 62, 97 |
| CviJI | RGCY | 3 cut(s) | 135, 143, 159 |
| CviKI_1 | RGCY | 3 cut(s) | 135, 143, 159 |
| CviQI | GTAC | 1 cut(s) | 148 |
| DdeI | CTNAG | 1 cut(s) | 139 |
| DpnI | GATC | 1 cut(s) | 104 |
| DpnII | GATC | 1 cut(s) | 102 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 92 |
| FaiI | YATR | 2 cut(s) | 109, 146 |
| FaqI | GGGAC | 1 cut(s) | 74 |
| Fnu4HI | GCNGC | 1 cut(s) | 160 |
| Fsp4HI | GCNGC | 1 cut(s) | 160 |
| GluI | GCNGC | 1 cut(s) | 160 |
| HaeIII | GGCC | 1 cut(s) | 135 |
| HinfI | GANTC | 2 cut(s) | 115, 152 |
| Hpy188III | TCNNGA | 3 cut(s) | 17, 59, 91 |
| Hpy99I | CGWCG | 1 cut(s) | 60 |
| HpyAV | CCTTC | 1 cut(s) | 88 |
| HpyCH4III | ACNGT | 1 cut(s) | 28 |
| HpyF3I | CTNAG | 1 cut(s) | 139 |
| Kzo9I | GATC | 1 cut(s) | 102 |
| LpnPI | CCDG | 1 cut(s) | 107 |
| Lsp1109I | GCAGC | 1 cut(s) | 146 |
| MaeIII | GTNAC | 1 cut(s) | 83 |
| MalI | GATC | 1 cut(s) | 104 |
| MboI | GATC | 1 cut(s) | 102 |
| MflI | RGATCY | 1 cut(s) | 102 |
| MnlI | CCTC | 4 cut(s) | 47, 77, 98, 146 |
| MspA1I | CMGCKG | 1 cut(s) | 159 |
| MvnI | CGCG | 1 cut(s) | 92 |
| NdeII | GATC | 1 cut(s) | 102 |
| NruI | TCGCGA | 1 cut(s) | 92 |
| PfeI | GAWTC | 2 cut(s) | 115, 152 |
| PkrI | GCNGC | 1 cut(s) | 161 |
| PsuI | RGATCY | 1 cut(s) | 102 |
| PvuII | CAGCTG | 1 cut(s) | 159 |
| RruI | TCGCGA | 1 cut(s) | 92 |
| RsaI | GTAC | 1 cut(s) | 149 |
| RsaNI | GTAC | 1 cut(s) | 148 |
| SatI | GCNGC | 1 cut(s) | 160 |
| Sau3AI | GATC | 1 cut(s) | 102 |
| SetI | ASST | 5 cut(s) | 39, 69, 90, 145, 161 |
| SgeI | CNNG | 7 cut(s) | 29, 71, 101, 103, 112, 124, 134 |
| SsiI | CCGC | 1 cut(s) | 6 |
| TaaI | ACNGT | 1 cut(s) | 28 |
| TaqI | TCGA | 2 cut(s) | 78, 113 |
| TfiI | GAWTC | 2 cut(s) | 115, 152 |
| TscAI | CASTG | 1 cut(s) | 31 |
| TseI | GCWGC | 1 cut(s) | 159 |
| TspRI | CASTG | 1 cut(s) | 31 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 92 |