isoform X1
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 579 |
| AccII | CGCG | 1 cut(s) | 395 |
| AciI | CCGC | 1 cut(s) | 236 |
| AcoI | YGGCCR | 1 cut(s) | 497 |
| AcyI | GRCGYC | 1 cut(s) | 580 |
| AdeI | CACNNNGTG | 1 cut(s) | 56 |
| AfaI | GTAC | 1 cut(s) | 601 |
| AflIII | ACRYGT | 1 cut(s) | 596 |
| AgsI | TTSAA | 4 cut(s) | 80, 161, 212, 453 |
| AluBI | AGCT | 3 cut(s) | 14, 378, 446 |
| AluI | AGCT | 3 cut(s) | 14, 378, 446 |
| Alw26I | GTCTC | 1 cut(s) | 194 |
| AoxI | GGCC | 2 cut(s) | 485, 497 |
| ApeKI | GCWGC | 2 cut(s) | 443, 524 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 116, 148 |
| AseI | ATTAAT | 1 cut(s) | 282 |
| AspLEI | GCGC | 3 cut(s) | 397, 582, 607 |
| AspS9I | GGNCC | 1 cut(s) | 124 |
| AsuHPI | GGTGA | 2 cut(s) | 104, 581 |
| AsuII | TTCGAA | 1 cut(s) | 511 |
| AvaII | GGWCC | 1 cut(s) | 124 |
| BalI | TGGCCA | 1 cut(s) | 499 |
| BanI | GGYRCC | 1 cut(s) | 579 |
| BauI | CACGAG | 1 cut(s) | 538 |
| BbvI | GCAGC | 2 cut(s) | 455, 536 |
| BccI | CCATC | 2 cut(s) | 43, 496 |
| BceAI | ACGGC | 2 cut(s) | 252, 268 |
| BcoDI | GTCTC | 1 cut(s) | 194 |
| BfaI | CTAG | 1 cut(s) | 447 |
| BfoI | RGCGCY | 1 cut(s) | 583 |
| BisI | GCNGC | 2 cut(s) | 444, 525 |
| BlsI | GCNGC | 2 cut(s) | 445, 526 |
| Bme18I | GGWCC | 1 cut(s) | 124 |
| BmgT120I | GGNCC | 1 cut(s) | 124 |
| BmiI | GGNNCC | 2 cut(s) | 336, 581 |
| BmsI | GCATC | 2 cut(s) | 40, 430 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 475, 507 |
| Bpu14I | TTCGAA | 1 cut(s) | 511 |
| BsaHI | GRCGYC | 1 cut(s) | 580 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 141, 171 |
| Bse118I | RCCGGY | 1 cut(s) | 561 |
| BseGI | GGATG | 2 cut(s) | 31, 406 |
| BseRI | GAGGAG | 2 cut(s) | 30, 556 |
| BseXI | GCAGC | 2 cut(s) | 455, 536 |
| Bsh1236I | CGCG | 1 cut(s) | 395 |
| BshFI | GGCC | 2 cut(s) | 487, 499 |
| BshNI | GGYRCC | 1 cut(s) | 579 |
| BsiSI | CCGG | 1 cut(s) | 562 |
| BsmAI | GTCTC | 1 cut(s) | 194 |
| BsnI | GGCC | 2 cut(s) | 487, 499 |
| Bsp119I | TTCGAA | 1 cut(s) | 511 |
| Bsp143I | GATC | 2 cut(s) | 61, 241 |
| BspACI | CCGC | 1 cut(s) | 236 |
| BspANI | GGCC | 2 cut(s) | 487, 499 |
| BspFNI | CGCG | 1 cut(s) | 395 |
| BspLI | GGNNCC | 2 cut(s) | 336, 581 |
| BspQI | GCTCTTC | 1 cut(s) | 21 |
| BspT104I | TTCGAA | 1 cut(s) | 511 |
| BspT107I | GGYRCC | 1 cut(s) | 579 |
| BsrFI | RCCGGY | 1 cut(s) | 561 |
| BssAI | RCCGGY | 1 cut(s) | 561 |
| BssMI | GATC | 2 cut(s) | 61, 241 |
| BssNI | GRCGYC | 1 cut(s) | 580 |
| BssSI | CACGAG | 1 cut(s) | 538 |
| Bst2BI | CACGAG | 1 cut(s) | 538 |
| Bst4CI | ACNGT | 1 cut(s) | 205 |
| Bst6I | CTCTTC | 2 cut(s) | 21, 90 |
| BstACI | GRCGYC | 1 cut(s) | 580 |
| BstBI | TTCGAA | 1 cut(s) | 511 |
| BstC8I | GCNNGC | 2 cut(s) | 113, 497 |
| BstF5I | GGATG | 2 cut(s) | 31, 406 |
| BstFNI | CGCG | 1 cut(s) | 395 |
| BstH2I | RGCGCY | 1 cut(s) | 583 |
| BstHHI | GCGC | 3 cut(s) | 397, 582, 607 |
| BstKTI | GATC | 2 cut(s) | 64, 244 |
| BstMAI | GTCTC | 1 cut(s) | 194 |
| BstMBI | GATC | 2 cut(s) | 61, 241 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 311 |
| BstNSI | RCATGY | 1 cut(s) | 305 |
| BstUI | CGCG | 1 cut(s) | 395 |
| BstV1I | GCAGC | 2 cut(s) | 455, 536 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 326, 495 |
| BsuRI | GGCC | 2 cut(s) | 487, 499 |
| BtsCI | GGATG | 2 cut(s) | 31, 406 |
| Cac8I | GCNNGC | 2 cut(s) | 113, 497 |
| CfoI | GCGC | 3 cut(s) | 397, 582, 607 |
| Cfr10I | RCCGGY | 1 cut(s) | 561 |
| Cfr13I | GGNCC | 1 cut(s) | 124 |
| Csp6I | GTAC | 1 cut(s) | 600 |
| CviAII | CATG | 4 cut(s) | 294, 302, 382, 398 |
| CviJI | RGCY | 8 cut(s) | 14, 153, 182, 378, 446, 469, 487, 499 |
| CviKI_1 | RGCY | 8 cut(s) | 14, 153, 182, 378, 446, 469, 487, 499 |
| CviQI | GTAC | 1 cut(s) | 600 |
| DinI | GGCGCC | 1 cut(s) | 581 |
| DpnI | GATC | 2 cut(s) | 63, 243 |
| DpnII | GATC | 2 cut(s) | 61, 241 |
| DraIII | CACNNNGTG | 1 cut(s) | 56 |
| EaeI | YGGCCR | 1 cut(s) | 497 |
| Eam1104I | CTCTTC | 2 cut(s) | 21, 90 |
| EarI | CTCTTC | 2 cut(s) | 21, 90 |
| Eco47I | GGWCC | 1 cut(s) | 124 |
| EgeI | GGCGCC | 1 cut(s) | 581 |
| EheI | GGCGCC | 1 cut(s) | 581 |
| FaeI | CATG | 4 cut(s) | 297, 305, 385, 401 |
| FatI | CATG | 4 cut(s) | 293, 301, 381, 397 |
| Fnu4HI | GCNGC | 2 cut(s) | 444, 525 |
| FokI | GGATG | 2 cut(s) | 18, 393 |
| Fsp4HI | GCNGC | 2 cut(s) | 444, 525 |
| FspBI | CTAG | 1 cut(s) | 447 |
| GlaI | GCGC | 3 cut(s) | 396, 581, 606 |
| GluI | GCNGC | 2 cut(s) | 444, 525 |
| HaeII | RGCGCY | 1 cut(s) | 583 |
| HaeIII | GGCC | 2 cut(s) | 487, 499 |
| HapII | CCGG | 1 cut(s) | 562 |
| HhaI | GCGC | 3 cut(s) | 397, 582, 607 |
| Hin1I | GRCGYC | 1 cut(s) | 580 |
| Hin1II | CATG | 4 cut(s) | 297, 305, 385, 401 |
| Hin6I | GCGC | 3 cut(s) | 395, 580, 605 |
| HinP1I | GCGC | 3 cut(s) | 395, 580, 605 |
| HinfI | GANTC | 2 cut(s) | 4, 386 |
| HpaII | CCGG | 1 cut(s) | 562 |
| HphI | GGTGA | 2 cut(s) | 104, 581 |
| Hpy166II | GTNNAC | 3 cut(s) | 124, 299, 600 |
| Hpy188I | TCNGA | 1 cut(s) | 614 |
| Hpy188III | TCNNGA | 2 cut(s) | 65, 80 |
| Hpy8I | GTNNAC | 3 cut(s) | 124, 299, 600 |
| HpyAV | CCTTC | 1 cut(s) | 524 |
| HpyCH4III | ACNGT | 1 cut(s) | 205 |
| HpyCH4IV | ACGT | 1 cut(s) | 596 |
| HpyCH4V | TGCA | 4 cut(s) | 111, 314, 443, 524 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 311 |
| HpySE526I | ACGT | 1 cut(s) | 596 |
| Hsp92I | GRCGYC | 1 cut(s) | 580 |
| Hsp92II | CATG | 4 cut(s) | 297, 305, 385, 401 |
| HspAI | GCGC | 3 cut(s) | 395, 580, 605 |
| KasI | GGCGCC | 1 cut(s) | 579 |
| Kzo9I | GATC | 2 cut(s) | 61, 241 |
| LguI | GCTCTTC | 1 cut(s) | 21 |
| LpnPI | CCDG | 5 cut(s) | 97, 351, 382, 481, 575 |
| Lsp1109I | GCAGC | 2 cut(s) | 455, 536 |
| LweI | GCATC | 2 cut(s) | 40, 430 |
| MaeI | CTAG | 1 cut(s) | 447 |
| MaeII | ACGT | 1 cut(s) | 596 |
| MaeIII | GTNAC | 2 cut(s) | 56, 347 |
| MalI | GATC | 2 cut(s) | 63, 243 |
| MboI | GATC | 2 cut(s) | 61, 241 |
| MboII | GAAGA | 4 cut(s) | 38, 107, 173, 449 |
| MlsI | TGGCCA | 1 cut(s) | 499 |
| MluCI | AATT | 2 cut(s) | 279, 283 |
| MluNI | TGGCCA | 1 cut(s) | 499 |
| Mly113I | GGCGCC | 1 cut(s) | 580 |
| MmeI | TCCRAC | 1 cut(s) | 307 |
| Mox20I | TGGCCA | 1 cut(s) | 499 |
| MscI | TGGCCA | 1 cut(s) | 499 |
| MseI | TTAA | 2 cut(s) | 282, 465 |
| MslI | CAYNNNNRTG | 1 cut(s) | 292 |
| Msp20I | TGGCCA | 1 cut(s) | 499 |
| MspI | CCGG | 1 cut(s) | 562 |
| MvnI | CGCG | 1 cut(s) | 395 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 311 |
| NarI | GGCGCC | 1 cut(s) | 580 |
| NdeII | GATC | 2 cut(s) | 61, 241 |
| NlaIII | CATG | 4 cut(s) | 297, 305, 385, 401 |
| NlaIV | GGNNCC | 2 cut(s) | 336, 581 |
| NmeAIII | GCCGAG | 1 cut(s) | 129 |
| NmuCI | GTSAC | 1 cut(s) | 56 |
| NspI | RCATGY | 1 cut(s) | 305 |
| NspV | TTCGAA | 1 cut(s) | 511 |
| PciSI | GCTCTTC | 1 cut(s) | 21 |
| PfeI | GAWTC | 2 cut(s) | 4, 386 |
| PkrI | GCNGC | 2 cut(s) | 445, 526 |
| PluTI | GGCGCC | 1 cut(s) | 583 |
| PshBI | ATTAAT | 1 cut(s) | 282 |
| PspN4I | GGNNCC | 2 cut(s) | 336, 581 |
| PspPI | GGNCC | 1 cut(s) | 124 |
| RsaI | GTAC | 1 cut(s) | 601 |
| RsaNI | GTAC | 1 cut(s) | 600 |
| RseI | CAYNNNNRTG | 1 cut(s) | 292 |
| SapI | GCTCTTC | 1 cut(s) | 21 |
| SaqAI | TTAA | 2 cut(s) | 282, 465 |
| SatI | GCNGC | 2 cut(s) | 444, 525 |
| Sau3AI | GATC | 2 cut(s) | 61, 241 |
| Sau96I | GGNCC | 1 cut(s) | 124 |
| SetI | ASST | 8 cut(s) | 16, 123, 327, 340, 371, 380, 448, 599 |
| SfaNI | GCATC | 2 cut(s) | 40, 430 |
| SfoI | GGCGCC | 1 cut(s) | 581 |
| SfuI | TTCGAA | 1 cut(s) | 511 |
| SgrAI | CRCCGGYG | 1 cut(s) | 561 |
| SinI | GGWCC | 1 cut(s) | 124 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 292 |
| Sse9I | AATT | 2 cut(s) | 279, 283 |
| SsiI | CCGC | 1 cut(s) | 236 |
| SspDI | GGCGCC | 1 cut(s) | 579 |
| SspMI | CTAG | 1 cut(s) | 447 |
| TaaI | ACNGT | 1 cut(s) | 205 |
| TaiI | ACGT | 1 cut(s) | 599 |
| TaqI | TCGA | 1 cut(s) | 511 |
| TasI | AATT | 2 cut(s) | 279, 283 |
| TatI | WGTACW | 1 cut(s) | 599 |
| TfiI | GAWTC | 2 cut(s) | 4, 386 |
| Tru1I | TTAA | 2 cut(s) | 282, 465 |
| Tru9I | TTAA | 2 cut(s) | 282, 465 |
| TseFI | GTSAC | 1 cut(s) | 56 |
| TseI | GCWGC | 2 cut(s) | 443, 524 |
| Tsp45I | GTSAC | 1 cut(s) | 56 |
| TspDTI | ATGAA | 6 cut(s) | 17, 206, 276, 395, 450, 530 |
| VpaK11BI | GGWCC | 1 cut(s) | 124 |
| VspI | ATTAAT | 1 cut(s) | 282 |
| XceI | RCATGY | 1 cut(s) | 305 |
| XspI | CTAG | 1 cut(s) | 447 |