isoform X1
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 367 |
| AcsI | RAATTY | 1 cut(s) | 31 |
| AcuI | CTGAAG | 1 cut(s) | 282 |
| AfaI | GTAC | 1 cut(s) | 163 |
| AgsI | TTSAA | 2 cut(s) | 364, 373 |
| AjnI | CCWGG | 2 cut(s) | 64, 356 |
| AluBI | AGCT | 1 cut(s) | 400 |
| AluI | AGCT | 1 cut(s) | 400 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 305 |
| AoxI | GGCC | 3 cut(s) | 169, 341, 353 |
| ApeKI | GCWGC | 1 cut(s) | 176 |
| ApoI | RAATTY | 1 cut(s) | 31 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 368 |
| AspS9I | GGNCC | 1 cut(s) | 354 |
| AsuC2I | CCSGG | 1 cut(s) | 348 |
| BaeGI | GKGCMC | 1 cut(s) | 414 |
| BbsI | GAAGAC | 1 cut(s) | 285 |
| BbvI | GCAGC | 1 cut(s) | 163 |
| BccI | CCATC | 1 cut(s) | 19 |
| BciT130I | CCWGG | 2 cut(s) | 66, 358 |
| BcnI | CCSGG | 1 cut(s) | 348 |
| BfaI | CTAG | 2 cut(s) | 60, 159 |
| BfmI | CTRYAG | 1 cut(s) | 253 |
| BisI | GCNGC | 1 cut(s) | 177 |
| BlsI | GCNGC | 1 cut(s) | 178 |
| BmcAI | AGTACT | 1 cut(s) | 163 |
| Bme1390I | CCNGG | 3 cut(s) | 66, 348, 358 |
| BmgT120I | GGNCC | 1 cut(s) | 354 |
| BmrFI | CCNGG | 3 cut(s) | 66, 348, 358 |
| BpiI | GAAGAC | 1 cut(s) | 285 |
| BpuMI | CCSGG | 1 cut(s) | 348 |
| BsaAI | YACGTR | 1 cut(s) | 100 |
| BsaJI | CCNNGG | 2 cut(s) | 64, 356 |
| BseBI | CCWGG | 2 cut(s) | 66, 358 |
| BseDI | CCNNGG | 2 cut(s) | 64, 356 |
| BseSI | GKGCMC | 1 cut(s) | 414 |
| BseXI | GCAGC | 1 cut(s) | 163 |
| BsgI | GTGCAG | 1 cut(s) | 41 |
| BshFI | GGCC | 3 cut(s) | 171, 343, 355 |
| BsiSI | CCGG | 1 cut(s) | 348 |
| BsmI | GAATGC | 1 cut(s) | 118 |
| BsnI | GGCC | 3 cut(s) | 171, 343, 355 |
| Bsp1286I | GDGCHC | 1 cut(s) | 414 |
| Bsp143I | GATC | 2 cut(s) | 83, 144 |
| BspACI | CCGC | 1 cut(s) | 367 |
| BspANI | GGCC | 3 cut(s) | 171, 343, 355 |
| BssECI | CCNNGG | 2 cut(s) | 64, 356 |
| BssMI | GATC | 2 cut(s) | 83, 144 |
| Bst2UI | CCWGG | 2 cut(s) | 66, 358 |
| Bst4CI | ACNGT | 1 cut(s) | 257 |
| Bst6I | CTCTTC | 1 cut(s) | 332 |
| BstBAI | YACGTR | 1 cut(s) | 100 |
| BstKTI | GATC | 2 cut(s) | 86, 147 |
| BstMBI | GATC | 2 cut(s) | 83, 144 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 19 |
| BstNI | CCWGG | 2 cut(s) | 66, 358 |
| BstSCI | CCNGG | 3 cut(s) | 64, 346, 356 |
| BstSFI | CTRYAG | 1 cut(s) | 253 |
| BstSLI | GKGCMC | 1 cut(s) | 414 |
| BstSNI | TACGTA | 1 cut(s) | 100 |
| BstV1I | GCAGC | 1 cut(s) | 163 |
| BstV2I | GAAGAC | 1 cut(s) | 285 |
| BsuRI | GGCC | 3 cut(s) | 171, 343, 355 |
| BtsIMutI | CAGTG | 1 cut(s) | 52 |
| CaiI | CAGNNNCTG | 1 cut(s) | 305 |
| Cfr13I | GGNCC | 1 cut(s) | 354 |
| Csp6I | GTAC | 1 cut(s) | 162 |
| CviAII | CATG | 3 cut(s) | 123, 129, 167 |
| CviJI | RGCY | 6 cut(s) | 13, 63, 171, 343, 355, 400 |
| CviKI_1 | RGCY | 6 cut(s) | 13, 63, 171, 343, 355, 400 |
| CviQI | GTAC | 1 cut(s) | 162 |
| DpnI | GATC | 2 cut(s) | 85, 146 |
| DpnII | GATC | 2 cut(s) | 83, 144 |
| Eam1104I | CTCTTC | 1 cut(s) | 332 |
| EarI | CTCTTC | 1 cut(s) | 332 |
| Eco105I | TACGTA | 1 cut(s) | 100 |
| Eco57I | CTGAAG | 1 cut(s) | 282 |
| EcoRI | GAATTC | 1 cut(s) | 31 |
| EcoRII | CCWGG | 2 cut(s) | 64, 356 |
| FaeI | CATG | 3 cut(s) | 126, 132, 170 |
| FatI | CATG | 3 cut(s) | 122, 128, 166 |
| Fnu4HI | GCNGC | 1 cut(s) | 177 |
| Fsp4HI | GCNGC | 1 cut(s) | 177 |
| FspBI | CTAG | 2 cut(s) | 60, 159 |
| GluI | GCNGC | 1 cut(s) | 177 |
| HaeIII | GGCC | 3 cut(s) | 171, 343, 355 |
| HapII | CCGG | 1 cut(s) | 348 |
| Hin1II | CATG | 3 cut(s) | 126, 132, 170 |
| HincII | GTYRAC | 1 cut(s) | 106 |
| HindII | GTYRAC | 1 cut(s) | 106 |
| HinfI | GANTC | 1 cut(s) | 302 |
| HpaI | GTTAAC | 1 cut(s) | 106 |
| HpaII | CCGG | 1 cut(s) | 348 |
| Hpy166II | GTNNAC | 1 cut(s) | 106 |
| Hpy188I | TCNGA | 4 cut(s) | 88, 115, 196, 301 |
| Hpy8I | GTNNAC | 1 cut(s) | 106 |
| Hpy99I | CGWCG | 1 cut(s) | 42 |
| HpyAV | CCTTC | 1 cut(s) | 345 |
| HpyCH4III | ACNGT | 1 cut(s) | 257 |
| HpyCH4IV | ACGT | 1 cut(s) | 99 |
| HpyCH4V | TGCA | 3 cut(s) | 22, 179, 308 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 19 |
| HpySE526I | ACGT | 1 cut(s) | 99 |
| Hsp92II | CATG | 3 cut(s) | 126, 132, 170 |
| KspAI | GTTAAC | 1 cut(s) | 106 |
| Kzo9I | GATC | 2 cut(s) | 83, 144 |
| LpnPI | CCDG | 5 cut(s) | 51, 78, 343, 361, 370 |
| Lsp1109I | GCAGC | 1 cut(s) | 163 |
| MaeI | CTAG | 2 cut(s) | 60, 159 |
| MaeII | ACGT | 1 cut(s) | 99 |
| MalI | GATC | 2 cut(s) | 85, 146 |
| MboI | GATC | 2 cut(s) | 83, 144 |
| MboII | GAAGA | 5 cut(s) | 183, 259, 285, 288, 349 |
| MfeI | CAATTG | 1 cut(s) | 148 |
| MhlI | GDGCHC | 1 cut(s) | 414 |
| MluCI | AATT | 3 cut(s) | 31, 148, 220 |
| MnlI | CCTC | 3 cut(s) | 70, 333, 379 |
| MroXI | GAANNNNTTC | 1 cut(s) | 368 |
| MseI | TTAA | 2 cut(s) | 105, 243 |
| MslI | CAYNNNNRTG | 1 cut(s) | 127 |
| MspI | CCGG | 1 cut(s) | 348 |
| MspR9I | CCNGG | 3 cut(s) | 66, 348, 358 |
| MunI | CAATTG | 1 cut(s) | 148 |
| Mva1269I | GAATGC | 1 cut(s) | 118 |
| MvaI | CCWGG | 2 cut(s) | 66, 358 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 19 |
| NciI | CCSGG | 1 cut(s) | 348 |
| NdeII | GATC | 2 cut(s) | 83, 144 |
| NlaIII | CATG | 3 cut(s) | 126, 132, 170 |
| PctI | GAATGC | 1 cut(s) | 118 |
| PdmI | GAANNNNTTC | 1 cut(s) | 368 |
| PfeI | GAWTC | 1 cut(s) | 302 |
| PkrI | GCNGC | 1 cut(s) | 178 |
| Ppu21I | YACGTR | 1 cut(s) | 100 |
| Psp6I | CCWGG | 2 cut(s) | 64, 356 |
| PspGI | CCWGG | 2 cut(s) | 64, 356 |
| PspPI | GGNCC | 1 cut(s) | 354 |
| PstNI | CAGNNNCTG | 1 cut(s) | 305 |
| RsaI | GTAC | 1 cut(s) | 163 |
| RsaNI | GTAC | 1 cut(s) | 162 |
| RseI | CAYNNNNRTG | 1 cut(s) | 127 |
| SaqAI | TTAA | 2 cut(s) | 105, 243 |
| SatI | GCNGC | 1 cut(s) | 177 |
| Sau3AI | GATC | 2 cut(s) | 83, 144 |
| Sau96I | GGNCC | 1 cut(s) | 354 |
| ScaI | AGTACT | 1 cut(s) | 163 |
| ScrFI | CCNGG | 3 cut(s) | 66, 348, 358 |
| SduI | GDGCHC | 1 cut(s) | 414 |
| SetI | ASST | 6 cut(s) | 21, 81, 102, 362, 390, 402 |
| SfcI | CTRYAG | 1 cut(s) | 253 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 127 |
| SnaBI | TACGTA | 1 cut(s) | 100 |
| Sse9I | AATT | 3 cut(s) | 31, 148, 220 |
| SsiI | CCGC | 1 cut(s) | 367 |
| SspMI | CTAG | 2 cut(s) | 60, 159 |
| StyD4I | CCNGG | 3 cut(s) | 64, 346, 356 |
| TaaI | ACNGT | 1 cut(s) | 257 |
| TaiI | ACGT | 1 cut(s) | 102 |
| TaqI | TCGA | 2 cut(s) | 82, 390 |
| TasI | AATT | 3 cut(s) | 31, 148, 220 |
| TatI | WGTACW | 1 cut(s) | 161 |
| TfiI | GAWTC | 1 cut(s) | 302 |
| Tru1I | TTAA | 2 cut(s) | 105, 243 |
| Tru9I | TTAA | 2 cut(s) | 105, 243 |
| TscAI | CASTG | 1 cut(s) | 52 |
| TseI | GCWGC | 1 cut(s) | 176 |
| TspDTI | ATGAA | 3 cut(s) | 84, 111, 117 |
| TspGWI | ACGGA | 1 cut(s) | 257 |
| TspRI | CASTG | 1 cut(s) | 52 |
| XapI | RAATTY | 1 cut(s) | 31 |
| XmnI | GAANNNNTTC | 1 cut(s) | 368 |
| XspI | CTAG | 2 cut(s) | 60, 159 |
| ZrmI | AGTACT | 1 cut(s) | 163 |