plant mutator transposase zinc finger
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| SWIM | PF04434 | 179 - 211 | 3.4e-10 | SWIM zinc finger |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 876 |
| AccII | CGCG | 1 cut(s) | 701 |
| AclWI | GGATC | 1 cut(s) | 274 |
| AcsI | RAATTY | 1 cut(s) | 125 |
| AcuI | CTGAAG | 1 cut(s) | 80 |
| AcyI | GRCGYC | 2 cut(s) | 478, 877 |
| AfaI | GTAC | 2 cut(s) | 665, 698 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 61, 728, 786, 886 |
| AflII | CTTAAG | 1 cut(s) | 185 |
| AflIII | ACRYGT | 1 cut(s) | 387 |
| AgsI | TTSAA | 4 cut(s) | 172, 212, 359, 457 |
| AluBI | AGCT | 3 cut(s) | 77, 162, 684 |
| AluI | AGCT | 3 cut(s) | 77, 162, 684 |
| Alw26I | GTCTC | 1 cut(s) | 500 |
| AlwI | GGATC | 1 cut(s) | 274 |
| AoxI | GGCC | 2 cut(s) | 322, 791 |
| ApeKI | GCWGC | 3 cut(s) | 617, 749, 772 |
| ApoI | RAATTY | 1 cut(s) | 125 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 216, 228 |
| AspLEI | GCGC | 2 cut(s) | 703, 879 |
| AspS9I | GGNCC | 1 cut(s) | 323 |
| AsuHPI | GGTGA | 1 cut(s) | 290 |
| BanI | GGYRCC | 1 cut(s) | 876 |
| BbvI | GCAGC | 3 cut(s) | 604, 761, 784 |
| BccI | CCATC | 2 cut(s) | 629, 802 |
| BceAI | ACGGC | 1 cut(s) | 558 |
| BcoDI | GTCTC | 1 cut(s) | 500 |
| BfaI | CTAG | 3 cut(s) | 11, 221, 236 |
| BfmI | CTRYAG | 2 cut(s) | 762, 831 |
| BfoI | RGCGCY | 1 cut(s) | 880 |
| BfrI | CTTAAG | 1 cut(s) | 185 |
| BglII | AGATCT | 1 cut(s) | 637 |
| BisI | GCNGC | 3 cut(s) | 618, 750, 773 |
| BlsI | GCNGC | 3 cut(s) | 619, 751, 774 |
| BmcAI | AGTACT | 1 cut(s) | 665 |
| BmgT120I | GGNCC | 1 cut(s) | 323 |
| BmiI | GGNNCC | 1 cut(s) | 878 |
| BmsI | GCATC | 1 cut(s) | 736 |
| BpuEI | CTTGAG | 1 cut(s) | 572 |
| BsaHI | GRCGYC | 2 cut(s) | 478, 877 |
| BsaJI | CCNNGG | 1 cut(s) | 780 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 374, 404 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 61, 728, 786, 886 |
| Bse1I | ACTGG | 1 cut(s) | 501 |
| Bse3DI | GCAATG | 1 cut(s) | 294 |
| BseDI | CCNNGG | 1 cut(s) | 780 |
| BseGI | GGATG | 4 cut(s) | 475, 621, 751, 849 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 61, 728, 786, 886 |
| BseMI | GCAATG | 1 cut(s) | 294 |
| BseNI | ACTGG | 1 cut(s) | 501 |
| BseRI | GAGGAG | 2 cut(s) | 24, 862 |
| BseXI | GCAGC | 3 cut(s) | 604, 761, 784 |
| BsgI | GTGCAG | 1 cut(s) | 791 |
| Bsh1236I | CGCG | 1 cut(s) | 701 |
| Bsh1285I | CGRYCG | 1 cut(s) | 540 |
| BshFI | GGCC | 2 cut(s) | 324, 793 |
| BshNI | GGYRCC | 1 cut(s) | 876 |
| BsiEI | CGRYCG | 1 cut(s) | 540 |
| BsiWI | CGTACG | 1 cut(s) | 696 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 61, 728, 786, 886 |
| BsmAI | GTCTC | 1 cut(s) | 500 |
| BsnI | GGCC | 2 cut(s) | 324, 793 |
| Bsp143I | GATC | 3 cut(s) | 266, 547, 637 |
| BspANI | GGCC | 2 cut(s) | 324, 793 |
| BspFNI | CGCG | 1 cut(s) | 701 |
| BspHI | TCATGA | 1 cut(s) | 129 |
| BspLI | GGNNCC | 1 cut(s) | 878 |
| BspMAI | CTGCAG | 1 cut(s) | 766 |
| BspPI | GGATC | 1 cut(s) | 274 |
| BspT107I | GGYRCC | 1 cut(s) | 876 |
| BspTI | CTTAAG | 1 cut(s) | 185 |
| BsrDI | GCAATG | 1 cut(s) | 294 |
| BsrI | ACTGG | 1 cut(s) | 501 |
| BssECI | CCNNGG | 1 cut(s) | 780 |
| BssMI | GATC | 3 cut(s) | 266, 547, 637 |
| BssNI | GRCGYC | 2 cut(s) | 478, 877 |
| BssT1I | CCWWGG | 1 cut(s) | 780 |
| Bst4CI | ACNGT | 1 cut(s) | 427 |
| BstACI | GRCGYC | 2 cut(s) | 478, 877 |
| BstAFI | CTTAAG | 1 cut(s) | 185 |
| BstC8I | GCNNGC | 1 cut(s) | 160 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 784 |
| BstF5I | GGATG | 4 cut(s) | 475, 621, 751, 849 |
| BstFNI | CGCG | 1 cut(s) | 701 |
| BstH2I | RGCGCY | 1 cut(s) | 880 |
| BstHHI | GCGC | 2 cut(s) | 703, 879 |
| BstKTI | GATC | 3 cut(s) | 269, 550, 640 |
| BstMAI | GTCTC | 1 cut(s) | 500 |
| BstMBI | GATC | 3 cut(s) | 266, 547, 637 |
| BstMCI | CGRYCG | 1 cut(s) | 540 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 617 |
| BstNSI | RCATGY | 4 cut(s) | 20, 391, 499, 897 |
| BstSFI | CTRYAG | 2 cut(s) | 762, 831 |
| BstUI | CGCG | 1 cut(s) | 701 |
| BstV1I | GCAGC | 3 cut(s) | 604, 761, 784 |
| BstX2I | RGATCY | 1 cut(s) | 637 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 632 |
| BstYI | RGATCY | 1 cut(s) | 637 |
| BsuRI | GGCC | 2 cut(s) | 324, 793 |
| BtsCI | GGATG | 4 cut(s) | 475, 621, 751, 849 |
| BtsI | GCAGTG | 1 cut(s) | 11 |
| BtsIMutI | CAGTG | 4 cut(s) | 11, 423, 508, 584 |
| Cac8I | GCNNGC | 1 cut(s) | 160 |
| CciI | TCATGA | 1 cut(s) | 129 |
| CfoI | GCGC | 2 cut(s) | 703, 879 |
| Cfr13I | GGNCC | 1 cut(s) | 323 |
| CseI | GACGC | 1 cut(s) | 467 |
| Csp6I | GTAC | 2 cut(s) | 664, 697 |
| CviQI | GTAC | 2 cut(s) | 664, 697 |
| DinI | GGCGCC | 1 cut(s) | 878 |
| DpnI | GATC | 3 cut(s) | 268, 549, 639 |
| DpnII | GATC | 3 cut(s) | 266, 547, 637 |
| Eco130I | CCWWGG | 1 cut(s) | 780 |
| Eco57I | CTGAAG | 1 cut(s) | 80 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 784 |
| EcoRI | GAATTC | 1 cut(s) | 125 |
| EcoT14I | CCWWGG | 1 cut(s) | 780 |
| EgeI | GGCGCC | 1 cut(s) | 878 |
| EheI | GGCGCC | 1 cut(s) | 878 |
| ErhI | CCWWGG | 1 cut(s) | 780 |
| Fnu4HI | GCNGC | 3 cut(s) | 618, 750, 773 |
| FokI | GGATG | 4 cut(s) | 482, 608, 758, 856 |
| Fsp4HI | GCNGC | 3 cut(s) | 618, 750, 773 |
| FspBI | CTAG | 3 cut(s) | 11, 221, 236 |
| GlaI | GCGC | 2 cut(s) | 702, 878 |
| GluI | GCNGC | 3 cut(s) | 618, 750, 773 |
| HaeII | RGCGCY | 1 cut(s) | 880 |
| HaeIII | GGCC | 2 cut(s) | 324, 793 |
| HgaI | GACGC | 1 cut(s) | 467 |
| HhaI | GCGC | 2 cut(s) | 703, 879 |
| Hin1I | GRCGYC | 2 cut(s) | 478, 877 |
| Hin6I | GCGC | 2 cut(s) | 701, 877 |
| HinP1I | GCGC | 2 cut(s) | 701, 877 |
| HincII | GTYRAC | 1 cut(s) | 109 |
| HindII | GTYRAC | 1 cut(s) | 109 |
| HinfI | GANTC | 5 cut(s) | 29, 181, 212, 302, 508 |
| HphI | GGTGA | 1 cut(s) | 290 |
| Hpy166II | GTNNAC | 3 cut(s) | 109, 335, 605 |
| Hpy188I | TCNGA | 1 cut(s) | 819 |
| Hpy188III | TCNNGA | 6 cut(s) | 130, 221, 236, 356, 551, 625 |
| Hpy8I | GTNNAC | 3 cut(s) | 109, 335, 605 |
| HpyAV | CCTTC | 7 cut(s) | 55, 188, 239, 265, 353, 394, 830 |
| HpyCH4III | ACNGT | 1 cut(s) | 427 |
| HpyCH4V | TGCA | 9 cut(s) | 4, 16, 140, 178, 411, 749, 764, 772, 897 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 617 |
| Hsp92I | GRCGYC | 2 cut(s) | 478, 877 |
| HspAI | GCGC | 2 cut(s) | 701, 877 |
| KasI | GGCGCC | 1 cut(s) | 876 |
| Kzo9I | GATC | 3 cut(s) | 266, 547, 637 |
| LpnPI | CCDG | 8 cut(s) | 39, 71, 81, 514, 638, 657, 783, 844 |
| Lsp1109I | GCAGC | 3 cut(s) | 604, 761, 784 |
| LweI | GCATC | 1 cut(s) | 736 |
| MaeI | CTAG | 3 cut(s) | 11, 221, 236 |
| MaeIII | GTNAC | 1 cut(s) | 47 |
| MalI | GATC | 3 cut(s) | 268, 549, 639 |
| MboI | GATC | 3 cut(s) | 266, 547, 637 |
| MboII | GAAGA | 1 cut(s) | 469 |
| MflI | RGATCY | 1 cut(s) | 637 |
| MluCI | AATT | 2 cut(s) | 125, 172 |
| Mly113I | GGCGCC | 1 cut(s) | 877 |
| MlyI | GAGTC | 2 cut(s) | 23, 502 |
| MmeI | TCCRAC | 1 cut(s) | 613 |
| MroXI | GAANNNNTTC | 2 cut(s) | 216, 228 |
| MseI | TTAA | 3 cut(s) | 186, 309, 372 |
| MslI | CAYNNNNRTG | 2 cut(s) | 598, 907 |
| MspCI | CTTAAG | 1 cut(s) | 185 |
| MvnI | CGCG | 1 cut(s) | 701 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 617 |
| NarI | GGCGCC | 1 cut(s) | 877 |
| NdeII | GATC | 3 cut(s) | 266, 547, 637 |
| NlaIV | GGNNCC | 1 cut(s) | 878 |
| NspI | RCATGY | 4 cut(s) | 20, 391, 499, 897 |
| PagI | TCATGA | 1 cut(s) | 129 |
| PciI | ACATGT | 1 cut(s) | 387 |
| PdmI | GAANNNNTTC | 2 cut(s) | 216, 228 |
| PfeI | GAWTC | 3 cut(s) | 181, 212, 302 |
| Pfl23II | CGTACG | 1 cut(s) | 696 |
| PkrI | GCNGC | 3 cut(s) | 619, 751, 774 |
| PleI | GAGTC | 2 cut(s) | 23, 502 |
| PluTI | GGCGCC | 1 cut(s) | 880 |
| PpsI | GAGTC | 2 cut(s) | 23, 502 |
| PscI | ACATGT | 1 cut(s) | 387 |
| PspLI | CGTACG | 1 cut(s) | 696 |
| PspN4I | GGNNCC | 1 cut(s) | 878 |
| PspPI | GGNCC | 1 cut(s) | 323 |
| PstI | CTGCAG | 1 cut(s) | 766 |
| PsuI | RGATCY | 1 cut(s) | 637 |
| RsaI | GTAC | 2 cut(s) | 665, 698 |
| RsaNI | GTAC | 2 cut(s) | 664, 697 |
| RseI | CAYNNNNRTG | 2 cut(s) | 598, 907 |
| SaqAI | TTAA | 3 cut(s) | 186, 309, 372 |
| SatI | GCNGC | 3 cut(s) | 618, 750, 773 |
| Sau3AI | GATC | 3 cut(s) | 266, 547, 637 |
| Sau96I | GGNCC | 1 cut(s) | 323 |
| ScaI | AGTACT | 1 cut(s) | 665 |
| SchI | GAGTC | 2 cut(s) | 23, 502 |
| SfaNI | GCATC | 1 cut(s) | 736 |
| SfcI | CTRYAG | 2 cut(s) | 762, 831 |
| SfoI | GGCGCC | 1 cut(s) | 878 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 598, 907 |
| SmlI | CTYRAG | 2 cut(s) | 185, 551 |
| SmoI | CTYRAG | 2 cut(s) | 185, 551 |
| Sse9I | AATT | 2 cut(s) | 125, 172 |
| SspDI | GGCGCC | 1 cut(s) | 876 |
| SspI | AATATT | 1 cut(s) | 727 |
| SspMI | CTAG | 3 cut(s) | 11, 221, 236 |
| StyI | CCWWGG | 1 cut(s) | 780 |
| TaaI | ACNGT | 1 cut(s) | 427 |
| TaqII | GACCGA | 1 cut(s) | 526 |
| TasI | AATT | 2 cut(s) | 125, 172 |
| TatI | WGTACW | 1 cut(s) | 663 |
| TfiI | GAWTC | 3 cut(s) | 181, 212, 302 |
| Tru1I | TTAA | 3 cut(s) | 186, 309, 372 |
| Tru9I | TTAA | 3 cut(s) | 186, 309, 372 |
| TscAI | CASTG | 3 cut(s) | 430, 508, 584 |
| TseI | GCWGC | 3 cut(s) | 617, 749, 772 |
| TspDTI | ATGAA | 4 cut(s) | 118, 146, 329, 747 |
| TspRI | CASTG | 3 cut(s) | 430, 508, 584 |
| Vha464I | CTTAAG | 1 cut(s) | 185 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 784 |
| XapI | RAATTY | 1 cut(s) | 125 |
| XbaI | TCTAGA | 2 cut(s) | 220, 235 |
| XceI | RCATGY | 4 cut(s) | 20, 391, 499, 897 |
| XmnI | GAANNNNTTC | 2 cut(s) | 216, 228 |
| XspI | CTAG | 3 cut(s) | 11, 221, 236 |
| ZrmI | AGTACT | 1 cut(s) | 665 |