isoform X1
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| SWIM | PF04434 | 33 - 64 | 3.8e-07 | SWIM zinc finger |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 370, 414 |
| AcoI | YGGCCR | 1 cut(s) | 415 |
| AcsI | RAATTY | 1 cut(s) | 334 |
| AcyI | GRCGYC | 1 cut(s) | 356 |
| AflII | CTTAAG | 1 cut(s) | 365 |
| AgsI | TTSAA | 7 cut(s) | 16, 46, 185, 339, 376, 522, 560 |
| AjnI | CCWGG | 1 cut(s) | 465 |
| AluBI | AGCT | 3 cut(s) | 35, 188, 403 |
| AluI | AGCT | 3 cut(s) | 35, 188, 403 |
| Ama87I | CYCGRG | 1 cut(s) | 350 |
| AoxI | GGCC | 3 cut(s) | 344, 415, 433 |
| ApeKI | GCWGC | 3 cut(s) | 162, 176, 188 |
| ApoI | RAATTY | 1 cut(s) | 334 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 118 |
| AspA2I | CCTAGG | 1 cut(s) | 359 |
| AspS9I | GGNCC | 3 cut(s) | 106, 433, 515 |
| AvaI | CYCGRG | 1 cut(s) | 350 |
| AvaII | GGWCC | 2 cut(s) | 106, 515 |
| AvrII | CCTAGG | 1 cut(s) | 359 |
| BauI | CACGAG | 1 cut(s) | 127 |
| BbsI | GAAGAC | 1 cut(s) | 455 |
| BbvI | GCAGC | 3 cut(s) | 149, 163, 175 |
| BciT130I | CCWGG | 1 cut(s) | 467 |
| BfaI | CTAG | 2 cut(s) | 360, 381 |
| BfrI | CTTAAG | 1 cut(s) | 365 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 423 |
| BisI | GCNGC | 4 cut(s) | 163, 177, 189, 415 |
| BlnI | CCTAGG | 1 cut(s) | 359 |
| BlsI | GCNGC | 4 cut(s) | 164, 178, 190, 416 |
| Bme1390I | CCNGG | 1 cut(s) | 467 |
| Bme18I | GGWCC | 2 cut(s) | 106, 515 |
| BmeT110I | CYCGRG | 1 cut(s) | 350 |
| BmgT120I | GGNCC | 3 cut(s) | 106, 433, 515 |
| BmrFI | CCNGG | 1 cut(s) | 467 |
| BpiI | GAAGAC | 1 cut(s) | 455 |
| BsaHI | GRCGYC | 1 cut(s) | 356 |
| BsaJI | CCNNGG | 4 cut(s) | 109, 166, 359, 466 |
| Bse3DI | GCAATG | 1 cut(s) | 319 |
| BseBI | CCWGG | 1 cut(s) | 467 |
| BseDI | CCNNGG | 4 cut(s) | 109, 166, 359, 466 |
| BseGI | GGATG | 1 cut(s) | 205 |
| BseMI | GCAATG | 1 cut(s) | 319 |
| BseRI | GAGGAG | 1 cut(s) | 399 |
| BseX3I | CGGCCG | 1 cut(s) | 415 |
| BseXI | GCAGC | 3 cut(s) | 149, 163, 175 |
| Bsh1285I | CGRYCG | 1 cut(s) | 418 |
| BshFI | GGCC | 3 cut(s) | 346, 417, 435 |
| BsiEI | CGRYCG | 1 cut(s) | 418 |
| BsiHKCI | CYCGRG | 1 cut(s) | 350 |
| BslFI | GGGAC | 1 cut(s) | 367 |
| BsmFI | GGGAC | 1 cut(s) | 367 |
| BsnI | GGCC | 3 cut(s) | 346, 417, 435 |
| BsoBI | CYCGRG | 1 cut(s) | 350 |
| Bsp143I | GATC | 1 cut(s) | 83 |
| Bsp19I | CCATGG | 1 cut(s) | 166 |
| BspACI | CCGC | 2 cut(s) | 370, 414 |
| BspANI | GGCC | 3 cut(s) | 346, 417, 435 |
| BspTI | CTTAAG | 1 cut(s) | 365 |
| BsrDI | GCAATG | 1 cut(s) | 319 |
| BssECI | CCNNGG | 4 cut(s) | 109, 166, 359, 466 |
| BssMI | GATC | 1 cut(s) | 83 |
| BssNI | GRCGYC | 1 cut(s) | 356 |
| BssSI | CACGAG | 1 cut(s) | 127 |
| BssT1I | CCWWGG | 3 cut(s) | 109, 166, 359 |
| Bst2BI | CACGAG | 1 cut(s) | 127 |
| Bst2UI | CCWGG | 1 cut(s) | 467 |
| Bst4CI | ACNGT | 1 cut(s) | 491 |
| BstACI | GRCGYC | 1 cut(s) | 356 |
| BstAFI | CTTAAG | 1 cut(s) | 365 |
| BstC8I | GCNNGC | 2 cut(s) | 310, 437 |
| BstDSI | CCRYGG | 1 cut(s) | 166 |
| BstF5I | GGATG | 1 cut(s) | 205 |
| BstKTI | GATC | 1 cut(s) | 86 |
| BstMBI | GATC | 1 cut(s) | 83 |
| BstMCI | CGRYCG | 1 cut(s) | 418 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 159, 185, 249, 423, 432 |
| BstNI | CCWGG | 1 cut(s) | 467 |
| BstSCI | CCNGG | 1 cut(s) | 465 |
| BstV1I | GCAGC | 3 cut(s) | 149, 163, 175 |
| BstV2I | GAAGAC | 1 cut(s) | 455 |
| BstZI | CGGCCG | 1 cut(s) | 415 |
| BsuRI | GGCC | 3 cut(s) | 346, 417, 435 |
| BtgI | CCRYGG | 1 cut(s) | 166 |
| BtsCI | GGATG | 1 cut(s) | 205 |
| Cac8I | GCNNGC | 2 cut(s) | 310, 437 |
| Cfr13I | GGNCC | 3 cut(s) | 106, 433, 515 |
| CseI | GACGC | 1 cut(s) | 364 |
| CviAII | CATG | 2 cut(s) | 167, 230 |
| CviJI | RGCY | 8 cut(s) | 35, 188, 293, 346, 364, 403, 417, 435 |
| CviKI_1 | RGCY | 8 cut(s) | 35, 188, 293, 346, 364, 403, 417, 435 |
| DpnI | GATC | 1 cut(s) | 85 |
| DpnII | GATC | 1 cut(s) | 83 |
| EaeI | YGGCCR | 1 cut(s) | 415 |
| EagI | CGGCCG | 1 cut(s) | 415 |
| EclXI | CGGCCG | 1 cut(s) | 415 |
| Eco130I | CCWWGG | 3 cut(s) | 109, 166, 359 |
| Eco147I | AGGCCT | 1 cut(s) | 346 |
| Eco47I | GGWCC | 2 cut(s) | 106, 515 |
| Eco52I | CGGCCG | 1 cut(s) | 415 |
| Eco88I | CYCGRG | 1 cut(s) | 350 |
| EcoRII | CCWGG | 1 cut(s) | 465 |
| EcoT14I | CCWWGG | 3 cut(s) | 109, 166, 359 |
| ErhI | CCWWGG | 3 cut(s) | 109, 166, 359 |
| FaeI | CATG | 2 cut(s) | 170, 233 |
| FaqI | GGGAC | 1 cut(s) | 367 |
| FatI | CATG | 2 cut(s) | 166, 229 |
| Fnu4HI | GCNGC | 4 cut(s) | 163, 177, 189, 415 |
| FokI | GGATG | 1 cut(s) | 212 |
| Fsp4HI | GCNGC | 4 cut(s) | 163, 177, 189, 415 |
| FspBI | CTAG | 2 cut(s) | 360, 381 |
| GluI | GCNGC | 4 cut(s) | 163, 177, 189, 415 |
| HaeIII | GGCC | 3 cut(s) | 346, 417, 435 |
| HgaI | GACGC | 1 cut(s) | 364 |
| Hin1I | GRCGYC | 1 cut(s) | 356 |
| Hin1II | CATG | 2 cut(s) | 170, 233 |
| HindIII | AAGCTT | 1 cut(s) | 33 |
| HinfI | GANTC | 1 cut(s) | 302 |
| Hpy166II | GTNNAC | 1 cut(s) | 106 |
| Hpy188I | TCNGA | 1 cut(s) | 301 |
| Hpy188III | TCNNGA | 2 cut(s) | 352, 381 |
| Hpy8I | GTNNAC | 1 cut(s) | 106 |
| HpyAV | CCTTC | 2 cut(s) | 14, 528 |
| HpyCH4III | ACNGT | 1 cut(s) | 491 |
| HpyCH4V | TGCA | 2 cut(s) | 52, 179 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 159, 185, 249, 423, 432 |
| Hsp92I | GRCGYC | 1 cut(s) | 356 |
| Hsp92II | CATG | 2 cut(s) | 170, 233 |
| Kzo9I | GATC | 1 cut(s) | 83 |
| LpnPI | CCDG | 4 cut(s) | 257, 449, 452, 479 |
| Lsp1109I | GCAGC | 3 cut(s) | 149, 163, 175 |
| MaeI | CTAG | 2 cut(s) | 360, 381 |
| MalI | GATC | 1 cut(s) | 85 |
| MboI | GATC | 1 cut(s) | 83 |
| MboII | GAAGA | 3 cut(s) | 288, 317, 460 |
| MluCI | AATT | 6 cut(s) | 180, 264, 273, 334, 522, 542 |
| MnlI | CCTC | 5 cut(s) | 202, 336, 339, 357, 377 |
| MroXI | GAANNNNTTC | 1 cut(s) | 118 |
| MseI | TTAA | 3 cut(s) | 366, 477, 549 |
| MslI | CAYNNNNRTG | 2 cut(s) | 66, 228 |
| MspCI | CTTAAG | 1 cut(s) | 365 |
| MspR9I | CCNGG | 1 cut(s) | 467 |
| MvaI | CCWGG | 1 cut(s) | 467 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 159, 185, 249, 423, 432 |
| NcoI | CCATGG | 1 cut(s) | 166 |
| NdeII | GATC | 1 cut(s) | 83 |
| NlaIII | CATG | 2 cut(s) | 170, 233 |
| PceI | AGGCCT | 1 cut(s) | 346 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 305, 415 |
| PdmI | GAANNNNTTC | 1 cut(s) | 118 |
| PfeI | GAWTC | 1 cut(s) | 302 |
| PkrI | GCNGC | 4 cut(s) | 164, 178, 190, 416 |
| Psp6I | CCWGG | 1 cut(s) | 465 |
| PspGI | CCWGG | 1 cut(s) | 465 |
| PspPI | GGNCC | 3 cut(s) | 106, 433, 515 |
| RseI | CAYNNNNRTG | 2 cut(s) | 66, 228 |
| SaqAI | TTAA | 3 cut(s) | 366, 477, 549 |
| SatI | GCNGC | 4 cut(s) | 163, 177, 189, 415 |
| Sau3AI | GATC | 1 cut(s) | 83 |
| Sau96I | GGNCC | 3 cut(s) | 106, 433, 515 |
| ScrFI | CCNGG | 1 cut(s) | 467 |
| SetI | ASST | 7 cut(s) | 9, 25, 37, 111, 190, 405, 455 |
| SinI | GGWCC | 2 cut(s) | 106, 515 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 66, 228 |
| SmlI | CTYRAG | 1 cut(s) | 365 |
| SmoI | CTYRAG | 1 cut(s) | 365 |
| Sse9I | AATT | 6 cut(s) | 180, 264, 273, 334, 522, 542 |
| SseBI | AGGCCT | 1 cut(s) | 346 |
| SsiI | CCGC | 2 cut(s) | 370, 414 |
| SspI | AATATT | 1 cut(s) | 498 |
| SspMI | CTAG | 2 cut(s) | 360, 381 |
| StuI | AGGCCT | 1 cut(s) | 346 |
| StyD4I | CCNGG | 1 cut(s) | 465 |
| StyI | CCWWGG | 3 cut(s) | 109, 166, 359 |
| TaaI | ACNGT | 1 cut(s) | 491 |
| TasI | AATT | 6 cut(s) | 180, 264, 273, 334, 522, 542 |
| TauI | GCSGC | 1 cut(s) | 417 |
| TfiI | GAWTC | 1 cut(s) | 302 |
| Tru1I | TTAA | 3 cut(s) | 366, 477, 549 |
| Tru9I | TTAA | 3 cut(s) | 366, 477, 549 |
| TseI | GCWGC | 3 cut(s) | 162, 176, 188 |
| TspDTI | ATGAA | 3 cut(s) | 90, 218, 310 |
| Vha464I | CTTAAG | 1 cut(s) | 365 |
| VpaK11BI | GGWCC | 2 cut(s) | 106, 515 |
| XapI | RAATTY | 1 cut(s) | 334 |
| XbaI | TCTAGA | 1 cut(s) | 380 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 286 |
| XmaJI | CCTAGG | 1 cut(s) | 359 |
| XmnI | GAANNNNTTC | 1 cut(s) | 118 |
| XspI | CTAG | 2 cut(s) | 360, 381 |