isoform X1
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| SWIM | PF04434 | 54 - 85 | 3.3e-09 | SWIM zinc finger |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 424 |
| AcsI | RAATTY | 1 cut(s) | 83 |
| AcyI | GRCGYC | 1 cut(s) | 508 |
| AfaI | GTAC | 2 cut(s) | 287, 320 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 408 |
| AflIII | ACRYGT | 2 cut(s) | 93, 265 |
| AgsI | TTSAA | 3 cut(s) | 79, 152, 335 |
| AluBI | AGCT | 1 cut(s) | 306 |
| AluI | AGCT | 1 cut(s) | 306 |
| Alw26I | GTCTC | 1 cut(s) | 122 |
| AoxI | GGCC | 1 cut(s) | 413 |
| ApeKI | GCWGC | 3 cut(s) | 239, 371, 394 |
| ApoI | RAATTY | 1 cut(s) | 83 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 187 |
| BbvI | GCAGC | 3 cut(s) | 226, 383, 406 |
| BccI | CCATC | 3 cut(s) | 204, 251, 424 |
| BcoDI | GTCTC | 1 cut(s) | 122 |
| BfmI | CTRYAG | 1 cut(s) | 384 |
| BglII | AGATCT | 1 cut(s) | 259 |
| BisI | GCNGC | 3 cut(s) | 240, 372, 395 |
| BlsI | GCNGC | 3 cut(s) | 241, 373, 396 |
| BmcAI | AGTACT | 1 cut(s) | 287 |
| BmsI | GCATC | 1 cut(s) | 358 |
| BpuEI | CTTGAG | 1 cut(s) | 194 |
| Bsa29I | ATCGAT | 1 cut(s) | 434 |
| BsaHI | GRCGYC | 1 cut(s) | 508 |
| BsaJI | CCNNGG | 1 cut(s) | 402 |
| BsaWI | WCCGGW | 1 cut(s) | 419 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 59, 89 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 408 |
| Bse1I | ACTGG | 1 cut(s) | 123 |
| BseCI | ATCGAT | 1 cut(s) | 434 |
| BseDI | CCNNGG | 1 cut(s) | 402 |
| BseGI | GGATG | 4 cut(s) | 243, 373, 416, 447 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 408 |
| BseMII | CTCAG | 1 cut(s) | 6 |
| BseNI | ACTGG | 1 cut(s) | 123 |
| BseRI | GAGGAG | 1 cut(s) | 484 |
| BseXI | GCAGC | 3 cut(s) | 226, 383, 406 |
| BsgI | GTGCAG | 1 cut(s) | 413 |
| Bsh1285I | CGRYCG | 2 cut(s) | 162, 424 |
| BshFI | GGCC | 1 cut(s) | 415 |
| BshVI | ATCGAT | 1 cut(s) | 434 |
| BsiEI | CGRYCG | 2 cut(s) | 162, 424 |
| BsiSI | CCGG | 1 cut(s) | 420 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 408 |
| BsmAI | GTCTC | 1 cut(s) | 122 |
| BsnI | GGCC | 1 cut(s) | 415 |
| Bsp143I | GATC | 2 cut(s) | 169, 259 |
| BspANI | GGCC | 1 cut(s) | 415 |
| BspCNI | CTCAG | 1 cut(s) | 7 |
| BspDI | ATCGAT | 1 cut(s) | 434 |
| BsrI | ACTGG | 1 cut(s) | 123 |
| BssECI | CCNNGG | 1 cut(s) | 402 |
| BssMI | GATC | 2 cut(s) | 169, 259 |
| BssNI | GRCGYC | 1 cut(s) | 508 |
| BssT1I | CCWWGG | 1 cut(s) | 402 |
| Bst4CI | ACNGT | 1 cut(s) | 49 |
| Bst6I | CTCTTC | 1 cut(s) | 461 |
| BstACI | GRCGYC | 1 cut(s) | 508 |
| BstDEI | CTNAG | 1 cut(s) | 15 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 406 |
| BstF5I | GGATG | 4 cut(s) | 243, 373, 416, 447 |
| BstKTI | GATC | 2 cut(s) | 172, 262 |
| BstMAI | GTCTC | 1 cut(s) | 122 |
| BstMBI | GATC | 2 cut(s) | 169, 259 |
| BstMCI | CGRYCG | 2 cut(s) | 162, 424 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 239 |
| BstNSI | RCATGY | 4 cut(s) | 97, 121, 269, 528 |
| BstSFI | CTRYAG | 1 cut(s) | 384 |
| BstV1I | GCAGC | 3 cut(s) | 226, 383, 406 |
| BstX2I | RGATCY | 1 cut(s) | 259 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 254 |
| BstYI | RGATCY | 1 cut(s) | 259 |
| Bsu15I | ATCGAT | 1 cut(s) | 434 |
| BsuRI | GGCC | 1 cut(s) | 415 |
| BsuTUI | ATCGAT | 1 cut(s) | 434 |
| BtsCI | GGATG | 4 cut(s) | 243, 373, 416, 447 |
| BtsIMutI | CAGTG | 3 cut(s) | 45, 130, 206 |
| ClaI | ATCGAT | 1 cut(s) | 434 |
| CseI | GACGC | 1 cut(s) | 497 |
| Csp6I | GTAC | 2 cut(s) | 286, 319 |
| CviAII | CATG | 8 cut(s) | 10, 94, 118, 146, 222, 266, 326, 525 |
| CviJI | RGCY | 5 cut(s) | 14, 71, 306, 397, 415 |
| CviKI_1 | RGCY | 5 cut(s) | 14, 71, 306, 397, 415 |
| CviQI | GTAC | 2 cut(s) | 286, 319 |
| DdeI | CTNAG | 1 cut(s) | 15 |
| DpnI | GATC | 2 cut(s) | 171, 261 |
| DpnII | GATC | 2 cut(s) | 169, 259 |
| Eam1104I | CTCTTC | 1 cut(s) | 461 |
| EarI | CTCTTC | 1 cut(s) | 461 |
| Eco130I | CCWWGG | 1 cut(s) | 402 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 406 |
| EcoT14I | CCWWGG | 1 cut(s) | 402 |
| EcoT22I | ATGCAT | 1 cut(s) | 277 |
| ErhI | CCWWGG | 1 cut(s) | 402 |
| FaeI | CATG | 8 cut(s) | 13, 97, 121, 149, 225, 269, 329, 528 |
| FatI | CATG | 8 cut(s) | 9, 93, 117, 145, 221, 265, 325, 524 |
| FblI | GTMKAC | 1 cut(s) | 424 |
| Fnu4HI | GCNGC | 3 cut(s) | 240, 372, 395 |
| FokI | GGATG | 4 cut(s) | 230, 380, 403, 454 |
| Fsp4HI | GCNGC | 3 cut(s) | 240, 372, 395 |
| GluI | GCNGC | 3 cut(s) | 240, 372, 395 |
| HaeIII | GGCC | 1 cut(s) | 415 |
| HapII | CCGG | 1 cut(s) | 420 |
| HgaI | GACGC | 1 cut(s) | 497 |
| Hin1I | GRCGYC | 1 cut(s) | 508 |
| Hin1II | CATG | 8 cut(s) | 13, 97, 121, 149, 225, 269, 329, 528 |
| HincII | GTYRAC | 1 cut(s) | 425 |
| HindII | GTYRAC | 1 cut(s) | 425 |
| HinfI | GANTC | 2 cut(s) | 130, 142 |
| HpaII | CCGG | 1 cut(s) | 420 |
| Hpy166II | GTNNAC | 3 cut(s) | 227, 321, 425 |
| Hpy188I | TCNGA | 1 cut(s) | 542 |
| Hpy188III | TCNNGA | 2 cut(s) | 173, 247 |
| Hpy8I | GTNNAC | 3 cut(s) | 227, 321, 425 |
| HpyAV | CCTTC | 2 cut(s) | 16, 452 |
| HpyCH4III | ACNGT | 1 cut(s) | 49 |
| HpyCH4V | TGCA | 6 cut(s) | 33, 275, 371, 394, 455, 528 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 239 |
| HpyF3I | CTNAG | 1 cut(s) | 15 |
| Hsp92I | GRCGYC | 1 cut(s) | 508 |
| Hsp92II | CATG | 8 cut(s) | 13, 97, 121, 149, 225, 269, 329, 528 |
| Kzo9I | GATC | 2 cut(s) | 169, 259 |
| LpnPI | CCDG | 3 cut(s) | 136, 260, 433 |
| Lsp1109I | GCAGC | 3 cut(s) | 226, 383, 406 |
| LweI | GCATC | 1 cut(s) | 358 |
| MaeIII | GTNAC | 1 cut(s) | 509 |
| MalI | GATC | 2 cut(s) | 171, 261 |
| MboI | GATC | 2 cut(s) | 169, 259 |
| MboII | GAAGA | 2 cut(s) | 91, 478 |
| MflI | RGATCY | 1 cut(s) | 259 |
| MluCI | AATT | 1 cut(s) | 83 |
| MlyI | GAGTC | 1 cut(s) | 124 |
| MmeI | TCCRAC | 2 cut(s) | 86, 235 |
| MnlI | CCTC | 7 cut(s) | 12, 61, 69, 307, 405, 408, 462 |
| Mph1103I | ATGCAT | 1 cut(s) | 277 |
| MroXI | GAANNNNTTC | 1 cut(s) | 187 |
| MslI | CAYNNNNRTG | 2 cut(s) | 220, 270 |
| MspI | CCGG | 1 cut(s) | 420 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 239 |
| NdeII | GATC | 2 cut(s) | 169, 259 |
| NlaIII | CATG | 8 cut(s) | 13, 97, 121, 149, 225, 269, 329, 528 |
| NmuCI | GTSAC | 1 cut(s) | 509 |
| NsiI | ATGCAT | 1 cut(s) | 277 |
| NspI | RCATGY | 4 cut(s) | 97, 121, 269, 528 |
| PciI | ACATGT | 2 cut(s) | 93, 265 |
| PdmI | GAANNNNTTC | 1 cut(s) | 187 |
| PfeI | GAWTC | 1 cut(s) | 142 |
| PkrI | GCNGC | 3 cut(s) | 241, 373, 396 |
| PleI | GAGTC | 1 cut(s) | 124 |
| PpsI | GAGTC | 1 cut(s) | 124 |
| PscI | ACATGT | 2 cut(s) | 93, 265 |
| PsuI | RGATCY | 1 cut(s) | 259 |
| RsaI | GTAC | 2 cut(s) | 287, 320 |
| RsaNI | GTAC | 2 cut(s) | 286, 319 |
| RseI | CAYNNNNRTG | 2 cut(s) | 220, 270 |
| SalI | GTCGAC | 1 cut(s) | 423 |
| SatI | GCNGC | 3 cut(s) | 240, 372, 395 |
| Sau3AI | GATC | 2 cut(s) | 169, 259 |
| ScaI | AGTACT | 1 cut(s) | 287 |
| SchI | GAGTC | 1 cut(s) | 124 |
| SetI | ASST | 4 cut(s) | 27, 308, 346, 463 |
| SfaNI | GCATC | 1 cut(s) | 358 |
| SfcI | CTRYAG | 1 cut(s) | 384 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 220, 270 |
| SmlI | CTYRAG | 1 cut(s) | 173 |
| SmoI | CTYRAG | 1 cut(s) | 173 |
| Sse9I | AATT | 1 cut(s) | 83 |
| SspI | AATATT | 1 cut(s) | 349 |
| StyI | CCWWGG | 1 cut(s) | 402 |
| TaaI | ACNGT | 1 cut(s) | 49 |
| TaqI | TCGA | 3 cut(s) | 282, 424, 434 |
| TaqII | GACCGA | 1 cut(s) | 148 |
| TasI | AATT | 1 cut(s) | 83 |
| TatI | WGTACW | 1 cut(s) | 285 |
| TfiI | GAWTC | 1 cut(s) | 142 |
| TscAI | CASTG | 3 cut(s) | 52, 130, 206 |
| TseFI | GTSAC | 1 cut(s) | 509 |
| TseI | GCWGC | 3 cut(s) | 239, 371, 394 |
| Tsp45I | GTSAC | 1 cut(s) | 509 |
| TspDTI | ATGAA | 3 cut(s) | 134, 369, 458 |
| TspGWI | ACGGA | 2 cut(s) | 80, 195 |
| TspRI | CASTG | 3 cut(s) | 52, 130, 206 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 406 |
| XapI | RAATTY | 1 cut(s) | 83 |
| XceI | RCATGY | 4 cut(s) | 97, 121, 269, 528 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 435 |
| XmiI | GTMKAC | 1 cut(s) | 424 |
| XmnI | GAANNNNTTC | 1 cut(s) | 187 |
| ZrmI | AGTACT | 1 cut(s) | 287 |
| Zsp2I | ATGCAT | 1 cut(s) | 277 |