isoform X1
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 653 |
| AccB1I | GGYRCC | 1 cut(s) | 472 |
| AccII | CGCG | 2 cut(s) | 67, 75 |
| AclWI | GGATC | 1 cut(s) | 672 |
| AcsI | RAATTY | 2 cut(s) | 424, 693 |
| AfaI | GTAC | 1 cut(s) | 218 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 111, 112 |
| AflIII | ACRYGT | 1 cut(s) | 219 |
| AgeI | ACCGGT | 1 cut(s) | 11 |
| AgsI | TTSAA | 6 cut(s) | 95, 100, 313, 424, 564, 677 |
| AjnI | CCWGG | 1 cut(s) | 140 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 481, 513 |
| AluBI | AGCT | 1 cut(s) | 46 |
| AluI | AGCT | 1 cut(s) | 46 |
| Alw21I | GWGCWC | 1 cut(s) | 464 |
| Alw26I | GTCTC | 1 cut(s) | 295 |
| AlwI | GGATC | 1 cut(s) | 672 |
| AoxI | GGCC | 1 cut(s) | 605 |
| ApoI | RAATTY | 2 cut(s) | 424, 693 |
| AsiGI | ACCGGT | 1 cut(s) | 11 |
| AspLEI | GCGC | 2 cut(s) | 69, 77 |
| AsuHPI | GGTGA | 2 cut(s) | 167, 454 |
| BanI | GGYRCC | 1 cut(s) | 472 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 487, 519 |
| Bbv12I | GWGCWC | 1 cut(s) | 464 |
| BciT130I | CCWGG | 1 cut(s) | 142 |
| BclI | TGATCA | 1 cut(s) | 237 |
| BcoDI | GTCTC | 1 cut(s) | 295 |
| BfmI | CTRYAG | 1 cut(s) | 84 |
| Bme1390I | CCNGG | 1 cut(s) | 142 |
| BmiI | GGNNCC | 2 cut(s) | 474, 615 |
| BmrFI | CCNGG | 1 cut(s) | 142 |
| BmsI | GCATC | 2 cut(s) | 187, 568 |
| BpuEI | CTTGAG | 2 cut(s) | 116, 352 |
| BsaAI | YACGTR | 2 cut(s) | 182, 222 |
| BsaI | GGTCTC | 1 cut(s) | 295 |
| BsaJI | CCNNGG | 2 cut(s) | 192, 346 |
| BsaWI | WCCGGW | 1 cut(s) | 11 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 481, 511 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 111, 112 |
| Bse118I | RCCGGY | 1 cut(s) | 11 |
| BseBI | CCWGG | 1 cut(s) | 142 |
| BseDI | CCNNGG | 2 cut(s) | 192, 346 |
| BseGI | GGATG | 4 cut(s) | 42, 202, 388, 529 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 111, 112 |
| BseMII | CTCAG | 1 cut(s) | 175 |
| Bsh1236I | CGCG | 2 cut(s) | 67, 75 |
| BshFI | GGCC | 1 cut(s) | 607 |
| BshNI | GGYRCC | 1 cut(s) | 472 |
| BshTI | ACCGGT | 1 cut(s) | 11 |
| BsiHKAI | GWGCWC | 1 cut(s) | 464 |
| BsiSI | CCGG | 1 cut(s) | 12 |
| BslFI | GGGAC | 1 cut(s) | 88 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 111, 112 |
| BsmAI | GTCTC | 1 cut(s) | 295 |
| BsmFI | GGGAC | 1 cut(s) | 88 |
| BsnI | GGCC | 1 cut(s) | 607 |
| Bso31I | GGTCTC | 1 cut(s) | 295 |
| Bsp1286I | GDGCHC | 1 cut(s) | 464 |
| Bsp143I | GATC | 3 cut(s) | 23, 237, 664 |
| Bsp19I | CCATGG | 1 cut(s) | 192 |
| BspANI | GGCC | 1 cut(s) | 607 |
| BspCNI | CTCAG | 1 cut(s) | 174 |
| BspFNI | CGCG | 2 cut(s) | 67, 75 |
| BspHI | TCATGA | 1 cut(s) | 634 |
| BspLI | GGNNCC | 2 cut(s) | 474, 615 |
| BspPI | GGATC | 1 cut(s) | 672 |
| BspT107I | GGYRCC | 1 cut(s) | 472 |
| BspTNI | GGTCTC | 1 cut(s) | 295 |
| BsrFI | RCCGGY | 1 cut(s) | 11 |
| BssAI | RCCGGY | 1 cut(s) | 11 |
| BssECI | CCNNGG | 2 cut(s) | 192, 346 |
| BssMI | GATC | 3 cut(s) | 23, 237, 664 |
| BssT1I | CCWWGG | 2 cut(s) | 192, 346 |
| Bst2UI | CCWGG | 1 cut(s) | 142 |
| BstBAI | YACGTR | 2 cut(s) | 182, 222 |
| BstDEI | CTNAG | 2 cut(s) | 161, 187 |
| BstDSI | CCRYGG | 1 cut(s) | 192 |
| BstF5I | GGATG | 4 cut(s) | 42, 202, 388, 529 |
| BstFNI | CGCG | 2 cut(s) | 67, 75 |
| BstHHI | GCGC | 2 cut(s) | 69, 77 |
| BstKTI | GATC | 3 cut(s) | 26, 240, 667 |
| BstMAI | GTCTC | 1 cut(s) | 295 |
| BstMBI | GATC | 3 cut(s) | 23, 237, 664 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 197 |
| BstNI | CCWGG | 1 cut(s) | 142 |
| BstSCI | CCNGG | 1 cut(s) | 140 |
| BstSFI | CTRYAG | 1 cut(s) | 84 |
| BstUI | CGCG | 2 cut(s) | 67, 75 |
| BsuRI | GGCC | 1 cut(s) | 607 |
| BtgI | CCRYGG | 1 cut(s) | 192 |
| BtsCI | GGATG | 4 cut(s) | 42, 202, 388, 529 |
| BtsI | GCAGTG | 1 cut(s) | 561 |
| BtsIMutI | CAGTG | 1 cut(s) | 561 |
| CciI | TCATGA | 1 cut(s) | 634 |
| CfoI | GCGC | 2 cut(s) | 69, 77 |
| Cfr10I | RCCGGY | 1 cut(s) | 11 |
| Csp6I | GTAC | 1 cut(s) | 217 |
| CspAI | ACCGGT | 1 cut(s) | 11 |
| CspCI | CAANNNNNGTGG | 1 cut(s) | 30 |
| CviAII | CATG | 5 cut(s) | 193, 241, 534, 635, 659 |
| CviJI | RGCY | 6 cut(s) | 46, 89, 191, 607, 614, 648 |
| CviKI_1 | RGCY | 6 cut(s) | 46, 89, 191, 607, 614, 648 |
| CviQI | GTAC | 1 cut(s) | 217 |
| DdeI | CTNAG | 2 cut(s) | 161, 187 |
| DpnI | GATC | 3 cut(s) | 25, 239, 666 |
| DpnII | GATC | 3 cut(s) | 23, 237, 664 |
| DraI | TTTAAA | 1 cut(s) | 418 |
| Eco130I | CCWWGG | 2 cut(s) | 192, 346 |
| Eco31I | GGTCTC | 1 cut(s) | 295 |
| EcoRI | GAATTC | 1 cut(s) | 424 |
| EcoRII | CCWGG | 1 cut(s) | 140 |
| EcoT14I | CCWWGG | 2 cut(s) | 192, 346 |
| ErhI | CCWWGG | 2 cut(s) | 192, 346 |
| FaeI | CATG | 5 cut(s) | 196, 244, 537, 638, 662 |
| FaqI | GGGAC | 1 cut(s) | 88 |
| FatI | CATG | 5 cut(s) | 192, 240, 533, 634, 658 |
| FbaI | TGATCA | 1 cut(s) | 237 |
| FokI | GGATG | 4 cut(s) | 49, 209, 395, 536 |
| GlaI | GCGC | 2 cut(s) | 68, 76 |
| HaeIII | GGCC | 1 cut(s) | 607 |
| HapII | CCGG | 1 cut(s) | 12 |
| HhaI | GCGC | 2 cut(s) | 69, 77 |
| Hin1II | CATG | 5 cut(s) | 196, 244, 537, 638, 662 |
| Hin6I | GCGC | 2 cut(s) | 67, 75 |
| HinP1I | GCGC | 2 cut(s) | 67, 75 |
| HinfI | GANTC | 3 cut(s) | 159, 313, 449 |
| HpaII | CCGG | 1 cut(s) | 12 |
| HphI | GGTGA | 2 cut(s) | 167, 454 |
| Hpy166II | GTNNAC | 3 cut(s) | 17, 63, 219 |
| Hpy188I | TCNGA | 2 cut(s) | 158, 508 |
| Hpy188III | TCNNGA | 4 cut(s) | 7, 133, 251, 635 |
| Hpy8I | GTNNAC | 3 cut(s) | 17, 63, 219 |
| HpyCH4IV | ACGT | 3 cut(s) | 181, 221, 266 |
| HpyCH4V | TGCA | 2 cut(s) | 150, 200 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 197 |
| HpyF3I | CTNAG | 2 cut(s) | 161, 187 |
| HpySE526I | ACGT | 3 cut(s) | 181, 221, 266 |
| Hsp92II | CATG | 5 cut(s) | 196, 244, 537, 638, 662 |
| HspAI | GCGC | 2 cut(s) | 67, 75 |
| Ksp22I | TGATCA | 1 cut(s) | 237 |
| Kzo9I | GATC | 3 cut(s) | 23, 237, 664 |
| LmnI | GCTCC | 3 cut(s) | 51, 459, 619 |
| LpnPI | CCDG | 7 cut(s) | 25, 119, 127, 148, 154, 621, 629 |
| LweI | GCATC | 2 cut(s) | 187, 568 |
| MaeII | ACGT | 3 cut(s) | 181, 221, 266 |
| MaeIII | GTNAC | 1 cut(s) | 182 |
| MalI | GATC | 3 cut(s) | 25, 239, 666 |
| MboI | GATC | 3 cut(s) | 23, 237, 664 |
| MboII | GAAGA | 1 cut(s) | 534 |
| MfeI | CAATTG | 1 cut(s) | 95 |
| MhlI | GDGCHC | 1 cut(s) | 464 |
| MluCI | AATT | 5 cut(s) | 95, 389, 419, 424, 693 |
| MlyI | GAGTC | 1 cut(s) | 153 |
| MmeI | TCCRAC | 1 cut(s) | 145 |
| MnlI | CCTC | 8 cut(s) | 140, 207, 276, 280, 327, 438, 604, 655 |
| MseI | TTAA | 3 cut(s) | 270, 303, 417 |
| MslI | CAYNNNNRTG | 3 cut(s) | 54, 224, 470 |
| MspI | CCGG | 1 cut(s) | 12 |
| MspR9I | CCNGG | 1 cut(s) | 142 |
| MunI | CAATTG | 1 cut(s) | 95 |
| MvaI | CCWGG | 1 cut(s) | 142 |
| MvnI | CGCG | 2 cut(s) | 67, 75 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 197 |
| NcoI | CCATGG | 1 cut(s) | 192 |
| NdeII | GATC | 3 cut(s) | 23, 237, 664 |
| NlaIII | CATG | 5 cut(s) | 196, 244, 537, 638, 662 |
| NlaIV | GGNNCC | 2 cut(s) | 474, 615 |
| PagI | TCATGA | 1 cut(s) | 634 |
| PfeI | GAWTC | 2 cut(s) | 313, 449 |
| PfoI | TCCNGGA | 1 cut(s) | 140 |
| PinAI | ACCGGT | 1 cut(s) | 11 |
| PleI | GAGTC | 1 cut(s) | 153 |
| PpsI | GAGTC | 1 cut(s) | 153 |
| Ppu21I | YACGTR | 2 cut(s) | 182, 222 |
| PsiI | TTATAA | 1 cut(s) | 653 |
| Psp6I | CCWGG | 1 cut(s) | 140 |
| PspGI | CCWGG | 1 cut(s) | 140 |
| PspN4I | GGNNCC | 2 cut(s) | 474, 615 |
| RsaI | GTAC | 1 cut(s) | 218 |
| RsaNI | GTAC | 1 cut(s) | 217 |
| RseI | CAYNNNNRTG | 3 cut(s) | 54, 224, 470 |
| SaqAI | TTAA | 3 cut(s) | 270, 303, 417 |
| Sau3AI | GATC | 3 cut(s) | 23, 237, 664 |
| SchI | GAGTC | 1 cut(s) | 153 |
| ScrFI | CCNGG | 1 cut(s) | 142 |
| SduI | GDGCHC | 1 cut(s) | 464 |
| SfaNI | GCATC | 2 cut(s) | 187, 568 |
| SfcI | CTRYAG | 1 cut(s) | 84 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 54, 224, 470 |
| SmlI | CTYRAG | 2 cut(s) | 131, 331 |
| SmoI | CTYRAG | 2 cut(s) | 131, 331 |
| Sse9I | AATT | 5 cut(s) | 95, 389, 419, 424, 693 |
| SspI | AATATT | 1 cut(s) | 571 |
| StyD4I | CCNGG | 1 cut(s) | 140 |
| StyI | CCWWGG | 2 cut(s) | 192, 346 |
| TaiI | ACGT | 3 cut(s) | 184, 224, 269 |
| TaqI | TCGA | 2 cut(s) | 22, 327 |
| TasI | AATT | 5 cut(s) | 95, 389, 419, 424, 693 |
| TfiI | GAWTC | 2 cut(s) | 313, 449 |
| Tru1I | TTAA | 3 cut(s) | 270, 303, 417 |
| Tru9I | TTAA | 3 cut(s) | 270, 303, 417 |
| TscAI | CASTG | 1 cut(s) | 561 |
| TspDTI | ATGAA | 4 cut(s) | 272, 312, 522, 534 |
| TspRI | CASTG | 1 cut(s) | 561 |
| XapI | RAATTY | 2 cut(s) | 424, 693 |