isoform X1
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Exostosin_GT47 | PF03016 | 108 - 418 | 3e-76 | Exostosin GT47 domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 873, 1484 |
| Acc65I | GGTACC | 1 cut(s) | 465 |
| AccB1I | GGYRCC | 2 cut(s) | 465, 1362 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 454 |
| AccI | GTMKAC | 1 cut(s) | 1030 |
| AccII | CGCG | 4 cut(s) | 288, 358, 399, 711 |
| AccIII | TCCGGA | 1 cut(s) | 535 |
| AclWI | GGATC | 6 cut(s) | 18, 527, 540, 622, 728, 946 |
| AcoI | YGGCCR | 3 cut(s) | 403, 442, 609 |
| AcyI | GRCGYC | 2 cut(s) | 264, 1363 |
| AfaI | GTAC | 7 cut(s) | 338, 437, 467, 635, 689, 749, 1335 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 106, 454, 475, 607 |
| AflIII | ACRYGT | 1 cut(s) | 420 |
| AgsI | TTSAA | 8 cut(s) | 475, 980, 1075, 1175, 1214, 1231, 1286, 1325 |
| AhdI | GACNNNNNGTC | 3 cut(s) | 421, 424, 820 |
| AjiI | CACGTC | 1 cut(s) | 421 |
| AjnI | CCWGG | 4 cut(s) | 651, 816, 1019, 1242 |
| AluBI | AGCT | 6 cut(s) | 16, 582, 1100, 1165, 1226, 1381 |
| AluI | AGCT | 6 cut(s) | 16, 582, 1100, 1165, 1226, 1381 |
| Alw21I | GWGCWC | 1 cut(s) | 8 |
| Alw26I | GTCTC | 2 cut(s) | 211, 1252 |
| AlwI | GGATC | 6 cut(s) | 18, 527, 540, 622, 728, 946 |
| Aor13HI | TCCGGA | 1 cut(s) | 535 |
| AoxI | GGCC | 6 cut(s) | 108, 403, 442, 609, 626, 726 |
| ApeKI | GCWGC | 4 cut(s) | 16, 382, 1037, 1165 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 762, 794 |
| AseI | ATTAAT | 1 cut(s) | 864 |
| Asp718I | GGTACC | 1 cut(s) | 465 |
| AspLEI | GCGC | 4 cut(s) | 52, 661, 682, 1365 |
| AspS9I | GGNCC | 4 cut(s) | 109, 478, 499, 814 |
| AsuC2I | CCSGG | 3 cut(s) | 441, 503, 1236 |
| AsuHPI | GGTGA | 6 cut(s) | 355, 841, 848, 890, 1097, 1321 |
| AvaII | GGWCC | 3 cut(s) | 478, 499, 814 |
| BaeGI | GKGCMC | 1 cut(s) | 849 |
| BamHI | GGATCC | 1 cut(s) | 532 |
| BanI | GGYRCC | 2 cut(s) | 465, 1362 |
| Bbv12I | GWGCWC | 1 cut(s) | 8 |
| BbvCI | CCTCAGC | 1 cut(s) | 191 |
| BbvI | GCAGC | 4 cut(s) | 3, 394, 1024, 1152 |
| BccI | CCATC | 1 cut(s) | 1102 |
| BceAI | ACGGC | 6 cut(s) | 37, 43, 188, 251, 385, 547 |
| BciT130I | CCWGG | 4 cut(s) | 653, 818, 1021, 1244 |
| BclI | TGATCA | 1 cut(s) | 720 |
| BcnI | CCSGG | 3 cut(s) | 441, 503, 1236 |
| BcoDI | GTCTC | 2 cut(s) | 211, 1252 |
| BfmI | CTRYAG | 2 cut(s) | 1119, 1189 |
| BfoI | RGCGCY | 3 cut(s) | 53, 662, 1366 |
| BmcAI | AGTACT | 1 cut(s) | 689 |
| Bme1390I | CCNGG | 7 cut(s) | 441, 503, 653, 818, 1021, 1236, 1244 |
| Bme18I | GGWCC | 3 cut(s) | 478, 499, 814 |
| BmeRI | GACNNNNNGTC | 3 cut(s) | 421, 424, 820 |
| BmgBI | CACGTC | 1 cut(s) | 421 |
| BmgT120I | GGNCC | 4 cut(s) | 109, 478, 499, 814 |
| BmiI | GGNNCC | 3 cut(s) | 467, 534, 1364 |
| BmrFI | CCNGG | 7 cut(s) | 441, 503, 653, 818, 1021, 1236, 1244 |
| BmrI | ACTGGG | 1 cut(s) | 1485 |
| BmsI | GCATC | 3 cut(s) | 381, 1041, 1242 |
| BmuI | ACTGGG | 1 cut(s) | 1485 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 371, 403 |
| BpmI | CTGGAG | 1 cut(s) | 695 |
| Bpu10I | CCTNAGC | 1 cut(s) | 191 |
| BpuEI | CTTGAG | 4 cut(s) | 416, 470, 598, 791 |
| BpuMI | CCSGG | 3 cut(s) | 441, 503, 1236 |
| Bsa29I | ATCGAT | 1 cut(s) | 928 |
| BsaAI | YACGTR | 1 cut(s) | 559 |
| BsaHI | GRCGYC | 2 cut(s) | 264, 1363 |
| BsaI | GGTCTC | 1 cut(s) | 1252 |
| BsaJI | CCNNGG | 5 cut(s) | 105, 397, 439, 817, 1020 |
| BsaWI | WCCGGW | 2 cut(s) | 535, 858 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 106, 454, 475, 607 |
| Bse118I | RCCGGY | 4 cut(s) | 514, 600, 628, 1104 |
| Bse1I | ACTGG | 3 cut(s) | 695, 1269, 1480 |
| BseAI | TCCGGA | 1 cut(s) | 535 |
| BseBI | CCWGG | 4 cut(s) | 653, 818, 1021, 1244 |
| BseCI | ATCGAT | 1 cut(s) | 928 |
| BseDI | CCNNGG | 5 cut(s) | 105, 397, 439, 817, 1020 |
| BseGI | GGATG | 3 cut(s) | 841, 997, 1056 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 106, 454, 475, 607 |
| BseMII | CTCAG | 1 cut(s) | 205 |
| BseNI | ACTGG | 3 cut(s) | 695, 1269, 1480 |
| BseSI | GKGCMC | 1 cut(s) | 849 |
| BseX3I | CGGCCG | 2 cut(s) | 403, 609 |
| BseXI | GCAGC | 4 cut(s) | 3, 394, 1024, 1152 |
| Bsh1236I | CGCG | 4 cut(s) | 288, 358, 399, 711 |
| Bsh1285I | CGRYCG | 2 cut(s) | 406, 612 |
| BshFI | GGCC | 6 cut(s) | 110, 405, 444, 611, 628, 728 |
| BshNI | GGYRCC | 2 cut(s) | 465, 1362 |
| BshVI | ATCGAT | 1 cut(s) | 928 |
| BsiEI | CGRYCG | 2 cut(s) | 406, 612 |
| BsiHKAI | GWGCWC | 1 cut(s) | 8 |
| BslFI | GGGAC | 1 cut(s) | 1121 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 106, 454, 475, 607 |
| BsmAI | GTCTC | 2 cut(s) | 211, 1252 |
| BsmBI | CGTCTC | 1 cut(s) | 211 |
| BsmFI | GGGAC | 1 cut(s) | 1121 |
| BsnI | GGCC | 6 cut(s) | 110, 405, 444, 611, 628, 728 |
| Bso31I | GGTCTC | 1 cut(s) | 1252 |
| Bsp1286I | GDGCHC | 2 cut(s) | 8, 849 |
| Bsp13I | TCCGGA | 1 cut(s) | 535 |
| Bsp1407I | TGTACA | 1 cut(s) | 747 |
| Bsp143I | GATC | 8 cut(s) | 23, 532, 585, 614, 720, 733, 951, 1401 |
| Bsp19I | CCATGG | 1 cut(s) | 105 |
| BspANI | GGCC | 6 cut(s) | 110, 405, 444, 611, 628, 728 |
| BspCNI | CTCAG | 2 cut(s) | 4, 204 |
| BspDI | ATCGAT | 1 cut(s) | 928 |
| BspEI | TCCGGA | 1 cut(s) | 535 |
| BspFNI | CGCG | 4 cut(s) | 288, 358, 399, 711 |
| BspLI | GGNNCC | 3 cut(s) | 467, 534, 1364 |
| BspPI | GGATC | 6 cut(s) | 18, 527, 540, 622, 728, 946 |
| BspT107I | GGYRCC | 2 cut(s) | 465, 1362 |
| BspTNI | GGTCTC | 1 cut(s) | 1252 |
| BsrFI | RCCGGY | 4 cut(s) | 514, 600, 628, 1104 |
| BsrGI | TGTACA | 1 cut(s) | 747 |
| BsrI | ACTGG | 3 cut(s) | 695, 1269, 1480 |
| BssAI | RCCGGY | 4 cut(s) | 514, 600, 628, 1104 |
| BssECI | CCNNGG | 5 cut(s) | 105, 397, 439, 817, 1020 |
| BssMI | GATC | 8 cut(s) | 23, 532, 585, 614, 720, 733, 951, 1401 |
| BssNI | GRCGYC | 2 cut(s) | 264, 1363 |
| BssT1I | CCWWGG | 1 cut(s) | 105 |
| Bst2UI | CCWGG | 4 cut(s) | 653, 818, 1021, 1244 |
| Bst4CI | ACNGT | 3 cut(s) | 148, 1348, 1409 |
| Bst6I | CTCTTC | 4 cut(s) | 158, 476, 689, 981 |
| BstACI | GRCGYC | 2 cut(s) | 264, 1363 |
| BstAUI | TGTACA | 1 cut(s) | 747 |
| BstBAI | YACGTR | 1 cut(s) | 559 |
| BstC8I | GCNNGC | 8 cut(s) | 112, 135, 393, 397, 606, 630, 1102, 1106 |
| BstDEI | CTNAG | 4 cut(s) | 12, 191, 1062, 1256 |
| BstDSI | CCRYGG | 2 cut(s) | 105, 397 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 473 |
| BstF5I | GGATG | 3 cut(s) | 841, 997, 1056 |
| BstFNI | CGCG | 4 cut(s) | 288, 358, 399, 711 |
| BstH2I | RGCGCY | 3 cut(s) | 53, 662, 1366 |
| BstHHI | GCGC | 4 cut(s) | 52, 661, 682, 1365 |
| BstKTI | GATC | 8 cut(s) | 26, 535, 588, 617, 723, 736, 954, 1404 |
| BstMAI | GTCTC | 2 cut(s) | 211, 1252 |
| BstMBI | GATC | 8 cut(s) | 23, 532, 585, 614, 720, 733, 951, 1401 |
| BstMCI | CGRYCG | 2 cut(s) | 406, 612 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 49, 388, 405, 679 |
| BstNI | CCWGG | 4 cut(s) | 653, 818, 1021, 1244 |
| BstSCI | CCNGG | 7 cut(s) | 439, 501, 651, 816, 1019, 1234, 1242 |
| BstSFI | CTRYAG | 2 cut(s) | 1119, 1189 |
| BstSLI | GKGCMC | 1 cut(s) | 849 |
| BstUI | CGCG | 4 cut(s) | 288, 358, 399, 711 |
| BstV1I | GCAGC | 4 cut(s) | 3, 394, 1024, 1152 |
| BstX2I | RGATCY | 2 cut(s) | 532, 951 |
| BstYI | RGATCY | 2 cut(s) | 532, 951 |
| BstZI | CGGCCG | 2 cut(s) | 403, 609 |
| Bsu15I | ATCGAT | 1 cut(s) | 928 |
| BsuRI | GGCC | 6 cut(s) | 110, 405, 444, 611, 628, 728 |
| BsuTUI | ATCGAT | 1 cut(s) | 928 |
| BtgI | CCRYGG | 2 cut(s) | 105, 397 |
| BtrI | CACGTC | 1 cut(s) | 421 |
| BtsCI | GGATG | 3 cut(s) | 841, 997, 1056 |
| BtsIMutI | CAGTG | 3 cut(s) | 892, 1156, 1276 |
| Cac8I | GCNNGC | 8 cut(s) | 112, 135, 393, 397, 606, 630, 1102, 1106 |
| CciNI | GCGGCCGC | 1 cut(s) | 403 |
| CfoI | GCGC | 4 cut(s) | 52, 661, 682, 1365 |
| Cfr10I | RCCGGY | 4 cut(s) | 514, 600, 628, 1104 |
| Cfr13I | GGNCC | 4 cut(s) | 109, 478, 499, 814 |
| Cfr42I | CCGCGG | 1 cut(s) | 400 |
| ClaI | ATCGAT | 1 cut(s) | 928 |
| CpoI | CGGWCCG | 1 cut(s) | 499 |
| CseI | GACGC | 3 cut(s) | 272, 364, 717 |
| CsiI | ACCWGGT | 1 cut(s) | 651 |
| Csp6I | GTAC | 7 cut(s) | 337, 436, 466, 634, 688, 748, 1334 |
| CspI | CGGWCCG | 1 cut(s) | 499 |
| CviAII | CATG | 7 cut(s) | 106, 454, 716, 724, 919, 1007, 1046 |
| CviQI | GTAC | 7 cut(s) | 337, 436, 466, 634, 688, 748, 1334 |
| DdeI | CTNAG | 4 cut(s) | 12, 191, 1062, 1256 |
| DinI | GGCGCC | 1 cut(s) | 1364 |
| DpnI | GATC | 8 cut(s) | 25, 534, 587, 616, 722, 735, 953, 1403 |
| DpnII | GATC | 8 cut(s) | 23, 532, 585, 614, 720, 733, 951, 1401 |
| DriI | GACNNNNNGTC | 3 cut(s) | 421, 424, 820 |
| EaeI | YGGCCR | 3 cut(s) | 403, 442, 609 |
| EagI | CGGCCG | 2 cut(s) | 403, 609 |
| Eam1104I | CTCTTC | 4 cut(s) | 158, 476, 689, 981 |
| Eam1105I | GACNNNNNGTC | 3 cut(s) | 421, 424, 820 |
| EarI | CTCTTC | 4 cut(s) | 158, 476, 689, 981 |
| EciI | GGCGGA | 2 cut(s) | 560, 827 |
| EclXI | CGGCCG | 2 cut(s) | 403, 609 |
| Eco130I | CCWWGG | 1 cut(s) | 105 |
| Eco31I | GGTCTC | 1 cut(s) | 1252 |
| Eco32I | GATATC | 1 cut(s) | 883 |
| Eco47I | GGWCC | 3 cut(s) | 478, 499, 814 |
| Eco52I | CGGCCG | 2 cut(s) | 403, 609 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 473 |
| EcoO109I | RGGNCCY | 1 cut(s) | 478 |
| EcoRII | CCWGG | 4 cut(s) | 651, 816, 1019, 1242 |
| EcoRV | GATATC | 1 cut(s) | 883 |
| EcoT14I | CCWWGG | 1 cut(s) | 105 |
| EcoT22I | ATGCAT | 1 cut(s) | 1056 |
| EgeI | GGCGCC | 1 cut(s) | 1364 |
| EheI | GGCGCC | 1 cut(s) | 1364 |
| ErhI | CCWWGG | 1 cut(s) | 105 |
| Esp3I | CGTCTC | 1 cut(s) | 211 |
| FaeI | CATG | 7 cut(s) | 109, 457, 719, 727, 922, 1010, 1049 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1370, 1402 |
| FaqI | GGGAC | 1 cut(s) | 1121 |
| FatI | CATG | 7 cut(s) | 105, 453, 715, 723, 918, 1006, 1045 |
| FauI | CCCGC | 6 cut(s) | 119, 205, 220, 293, 404, 418 |
| FbaI | TGATCA | 1 cut(s) | 720 |
| FblI | GTMKAC | 1 cut(s) | 1030 |
| FokI | GGATG | 3 cut(s) | 848, 1004, 1063 |
| GlaI | GCGC | 4 cut(s) | 51, 660, 681, 1364 |
| GsuI | CTGGAG | 1 cut(s) | 695 |
| HaeII | RGCGCY | 3 cut(s) | 53, 662, 1366 |
| HaeIII | GGCC | 6 cut(s) | 110, 405, 444, 611, 628, 728 |
| HgaI | GACGC | 3 cut(s) | 272, 364, 717 |
| HhaI | GCGC | 4 cut(s) | 52, 661, 682, 1365 |
| Hin1I | GRCGYC | 2 cut(s) | 264, 1363 |
| Hin1II | CATG | 7 cut(s) | 109, 457, 719, 727, 922, 1010, 1049 |
| Hin6I | GCGC | 4 cut(s) | 50, 659, 680, 1363 |
| HinP1I | GCGC | 4 cut(s) | 50, 659, 680, 1363 |
| HincII | GTYRAC | 2 cut(s) | 592, 1031 |
| HindII | GTYRAC | 2 cut(s) | 592, 1031 |
| HindIII | AAGCTT | 1 cut(s) | 1379 |
| HinfI | GANTC | 8 cut(s) | 96, 494, 1027, 1075, 1115, 1214, 1239, 1278 |
| HphI | GGTGA | 6 cut(s) | 355, 841, 848, 890, 1097, 1321 |
| Hpy166II | GTNNAC | 4 cut(s) | 337, 363, 592, 1031 |
| Hpy188I | TCNGA | 7 cut(s) | 23, 67, 499, 619, 733, 956, 1293 |
| Hpy188III | TCNNGA | 4 cut(s) | 37, 352, 536, 1249 |
| Hpy8I | GTNNAC | 4 cut(s) | 337, 363, 592, 1031 |
| HpyAV | CCTTC | 4 cut(s) | 196, 235, 241, 826 |
| HpyCH4III | ACNGT | 3 cut(s) | 148, 1348, 1409 |
| HpyCH4IV | ACGT | 4 cut(s) | 276, 420, 558, 1058 |
| HpyCH4V | TGCA | 3 cut(s) | 776, 1054, 1373 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 49, 388, 405, 679 |
| HpyF3I | CTNAG | 4 cut(s) | 12, 191, 1062, 1256 |
| HpySE526I | ACGT | 4 cut(s) | 276, 420, 558, 1058 |
| Hsp92I | GRCGYC | 2 cut(s) | 264, 1363 |
| Hsp92II | CATG | 7 cut(s) | 109, 457, 719, 727, 922, 1010, 1049 |
| HspAI | GCGC | 4 cut(s) | 50, 659, 680, 1363 |
| KasI | GGCGCC | 1 cut(s) | 1362 |
| Kpn2I | TCCGGA | 1 cut(s) | 535 |
| KpnI | GGTACC | 1 cut(s) | 469 |
| KroI | GCCGGC | 2 cut(s) | 628, 1104 |
| KroNI | GCCGGC | 2 cut(s) | 630, 1106 |
| Ksp22I | TGATCA | 1 cut(s) | 720 |
| KspI | CCGCGG | 1 cut(s) | 400 |
| Kzo9I | GATC | 8 cut(s) | 23, 532, 585, 614, 720, 733, 951, 1401 |
| LmnI | GCTCC | 1 cut(s) | 24 |
| Lsp1109I | GCAGC | 4 cut(s) | 3, 394, 1024, 1152 |
| LweI | GCATC | 3 cut(s) | 381, 1041, 1242 |
| MabI | ACCWGGT | 1 cut(s) | 651 |
| MaeII | ACGT | 4 cut(s) | 276, 420, 558, 1058 |
| MaeIII | GTNAC | 1 cut(s) | 1409 |
| MalI | GATC | 8 cut(s) | 25, 534, 587, 616, 722, 735, 953, 1403 |
| MboI | GATC | 8 cut(s) | 23, 532, 585, 614, 720, 733, 951, 1401 |
| MboII | GAAGA | 8 cut(s) | 145, 463, 559, 706, 907, 998, 1187, 1207 |
| MflI | RGATCY | 2 cut(s) | 532, 951 |
| MhlI | GDGCHC | 2 cut(s) | 8, 849 |
| MluCI | AATT | 3 cut(s) | 301, 307, 1263 |
| Mly113I | GGCGCC | 1 cut(s) | 1363 |
| MlyI | GAGTC | 2 cut(s) | 1036, 1109 |
| MmeI | TCCRAC | 2 cut(s) | 51, 336 |
| Mph1103I | ATGCAT | 1 cut(s) | 1056 |
| MroI | TCCGGA | 1 cut(s) | 535 |
| MroNI | GCCGGC | 2 cut(s) | 628, 1104 |
| MseI | TTAA | 1 cut(s) | 864 |
| MspA1I | CMGCKG | 1 cut(s) | 399 |
| MspR9I | CCNGG | 7 cut(s) | 441, 503, 653, 818, 1021, 1236, 1244 |
| MvaI | CCWGG | 4 cut(s) | 653, 818, 1021, 1244 |
| MvnI | CGCG | 4 cut(s) | 288, 358, 399, 711 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 49, 388, 405, 679 |
| NaeI | GCCGGC | 2 cut(s) | 630, 1106 |
| NarI | GGCGCC | 1 cut(s) | 1363 |
| NciI | CCSGG | 3 cut(s) | 441, 503, 1236 |
| NcoI | CCATGG | 1 cut(s) | 105 |
| NdeII | GATC | 8 cut(s) | 23, 532, 585, 614, 720, 733, 951, 1401 |
| NgoMIV | GCCGGC | 2 cut(s) | 628, 1104 |
| NlaIII | CATG | 7 cut(s) | 109, 457, 719, 727, 922, 1010, 1049 |
| NlaIV | GGNNCC | 3 cut(s) | 467, 534, 1364 |
| NmuCI | GTSAC | 1 cut(s) | 1409 |
| NotI | GCGGCCGC | 1 cut(s) | 403 |
| NsiI | ATGCAT | 1 cut(s) | 1056 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 285, 375 |
| PdiI | GCCGGC | 2 cut(s) | 630, 1106 |
| PfeI | GAWTC | 6 cut(s) | 96, 494, 1075, 1214, 1239, 1278 |
| PflFI | GACNNNGTC | 2 cut(s) | 266, 503 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 454 |
| PleI | GAGTC | 2 cut(s) | 1035, 1109 |
| PluTI | GGCGCC | 1 cut(s) | 1366 |
| PpsI | GAGTC | 2 cut(s) | 1035, 1109 |
| Ppu21I | YACGTR | 1 cut(s) | 559 |
| PpuMI | RGGWCCY | 1 cut(s) | 478 |
| PshBI | ATTAAT | 1 cut(s) | 864 |
| PsiI | TTATAA | 2 cut(s) | 873, 1484 |
| Psp5II | RGGWCCY | 1 cut(s) | 478 |
| Psp6I | CCWGG | 4 cut(s) | 651, 816, 1019, 1242 |
| PspGI | CCWGG | 4 cut(s) | 651, 816, 1019, 1242 |
| PspN4I | GGNNCC | 3 cut(s) | 467, 534, 1364 |
| PspPI | GGNCC | 4 cut(s) | 109, 478, 499, 814 |
| PspPPI | RGGWCCY | 1 cut(s) | 478 |
| PsuI | RGATCY | 2 cut(s) | 532, 951 |
| PsyI | GACNNNGTC | 2 cut(s) | 266, 503 |
| RsaI | GTAC | 7 cut(s) | 338, 437, 467, 635, 689, 749, 1335 |
| RsaNI | GTAC | 7 cut(s) | 337, 436, 466, 634, 688, 748, 1334 |
| Rsr2I | CGGWCCG | 1 cut(s) | 499 |
| RsrII | CGGWCCG | 1 cut(s) | 499 |
| SacII | CCGCGG | 1 cut(s) | 400 |
| SalI | GTCGAC | 1 cut(s) | 1029 |
| SaqAI | TTAA | 1 cut(s) | 864 |
| Sau3AI | GATC | 8 cut(s) | 23, 532, 585, 614, 720, 733, 951, 1401 |
| Sau96I | GGNCC | 4 cut(s) | 109, 478, 499, 814 |
| ScaI | AGTACT | 1 cut(s) | 689 |
| SchI | GAGTC | 2 cut(s) | 1036, 1109 |
| ScrFI | CCNGG | 7 cut(s) | 441, 503, 653, 818, 1021, 1236, 1244 |
| SduI | GDGCHC | 2 cut(s) | 8, 849 |
| SexAI | ACCWGGT | 1 cut(s) | 651 |
| SfaNI | GCATC | 3 cut(s) | 381, 1041, 1242 |
| SfcI | CTRYAG | 2 cut(s) | 1119, 1189 |
| SfoI | GGCGCC | 1 cut(s) | 1364 |
| Sfr303I | CCGCGG | 1 cut(s) | 400 |
| SgrAI | CRCCGGYG | 1 cut(s) | 514 |
| SgrBI | CCGCGG | 1 cut(s) | 400 |
| SinI | GGWCC | 3 cut(s) | 478, 499, 814 |
| SmlI | CTYRAG | 4 cut(s) | 431, 485, 577, 806 |
| SmoI | CTYRAG | 4 cut(s) | 431, 485, 577, 806 |
| Sse9I | AATT | 3 cut(s) | 301, 307, 1263 |
| SspDI | GGCGCC | 1 cut(s) | 1362 |
| StyD4I | CCNGG | 7 cut(s) | 439, 501, 651, 816, 1019, 1234, 1242 |
| StyI | CCWWGG | 1 cut(s) | 105 |
| TaaI | ACNGT | 3 cut(s) | 148, 1348, 1409 |
| TaiI | ACGT | 4 cut(s) | 279, 423, 561, 1061 |
| TaqI | TCGA | 6 cut(s) | 378, 891, 928, 1030, 1250, 1400 |
| TasI | AATT | 3 cut(s) | 301, 307, 1263 |
| TatI | WGTACW | 2 cut(s) | 687, 747 |
| TauI | GCSGC | 6 cut(s) | 203, 402, 405, 408, 611, 805 |
| TfiI | GAWTC | 6 cut(s) | 96, 494, 1075, 1214, 1239, 1278 |
| Tru1I | TTAA | 1 cut(s) | 864 |
| Tru9I | TTAA | 1 cut(s) | 864 |
| TscAI | CASTG | 3 cut(s) | 892, 1156, 1276 |
| TseFI | GTSAC | 1 cut(s) | 1409 |
| TseI | GCWGC | 4 cut(s) | 16, 382, 1037, 1165 |
| Tsp45I | GTSAC | 1 cut(s) | 1409 |
| TspDTI | ATGAA | 4 cut(s) | 907, 999, 1316, 1451 |
| TspRI | CASTG | 3 cut(s) | 892, 1156, 1276 |
| Tth111I | GACNNNGTC | 2 cut(s) | 266, 503 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 454 |
| VpaK11BI | GGWCC | 3 cut(s) | 478, 499, 814 |
| VspI | ATTAAT | 1 cut(s) | 864 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 473 |
| XmiI | GTMKAC | 1 cut(s) | 1030 |
| ZrmI | AGTACT | 1 cut(s) | 689 |
| Zsp2I | ATGCAT | 1 cut(s) | 1056 |