isoform X1
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| MULE | PF10551 | 154 - 249 | 7.6e-12 | MULE transposase domain |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 927 |
| AccI | GTMKAC | 1 cut(s) | 454 |
| AclWI | GGATC | 2 cut(s) | 301, 955 |
| AcoI | YGGCCR | 1 cut(s) | 555 |
| AcsI | RAATTY | 1 cut(s) | 787 |
| AcuI | CTGAAG | 1 cut(s) | 603 |
| AfaI | GTAC | 2 cut(s) | 87, 699 |
| AflIII | ACRYGT | 1 cut(s) | 315 |
| AgsI | TTSAA | 6 cut(s) | 79, 161, 190, 437, 616, 920 |
| AjnI | CCWGG | 3 cut(s) | 703, 943, 995 |
| AluBI | AGCT | 2 cut(s) | 174, 862 |
| AluI | AGCT | 2 cut(s) | 174, 862 |
| Alw26I | GTCTC | 1 cut(s) | 572 |
| AlwI | GGATC | 2 cut(s) | 301, 955 |
| AoxI | GGCC | 1 cut(s) | 555 |
| ApoI | RAATTY | 1 cut(s) | 787 |
| AspS9I | GGNCC | 1 cut(s) | 504 |
| AsuHPI | GGTGA | 1 cut(s) | 887 |
| AvaII | GGWCC | 1 cut(s) | 504 |
| BalI | TGGCCA | 1 cut(s) | 557 |
| BanI | GGYRCC | 1 cut(s) | 927 |
| BccI | CCATC | 3 cut(s) | 47, 467, 515 |
| BceAI | ACGGC | 1 cut(s) | 915 |
| BciT130I | CCWGG | 3 cut(s) | 705, 945, 997 |
| BcoDI | GTCTC | 1 cut(s) | 572 |
| BfaI | CTAG | 1 cut(s) | 276 |
| Bme1390I | CCNGG | 3 cut(s) | 705, 945, 997 |
| Bme18I | GGWCC | 1 cut(s) | 504 |
| BmgT120I | GGNCC | 1 cut(s) | 504 |
| BmiI | GGNNCC | 3 cut(s) | 7, 505, 929 |
| BmrFI | CCNGG | 3 cut(s) | 705, 945, 997 |
| BmsI | GCATC | 4 cut(s) | 204, 391, 833, 868 |
| BsaJI | CCNNGG | 3 cut(s) | 194, 634, 943 |
| Bse1I | ACTGG | 2 cut(s) | 526, 535 |
| BseBI | CCWGG | 3 cut(s) | 705, 945, 997 |
| BseDI | CCNNGG | 3 cut(s) | 194, 634, 943 |
| BseGI | GGATG | 4 cut(s) | 62, 382, 507, 709 |
| BseMII | CTCAG | 2 cut(s) | 288, 567 |
| BseNI | ACTGG | 2 cut(s) | 526, 535 |
| BshFI | GGCC | 1 cut(s) | 557 |
| BshNI | GGYRCC | 1 cut(s) | 927 |
| BslFI | GGGAC | 1 cut(s) | 517 |
| BsmAI | GTCTC | 1 cut(s) | 572 |
| BsmFI | GGGAC | 1 cut(s) | 517 |
| BsmI | GAATGC | 1 cut(s) | 156 |
| BsnI | GGCC | 1 cut(s) | 557 |
| Bsp143I | GATC | 3 cut(s) | 293, 661, 947 |
| BspANI | GGCC | 1 cut(s) | 557 |
| BspCNI | CTCAG | 2 cut(s) | 289, 568 |
| BspLI | GGNNCC | 3 cut(s) | 7, 505, 929 |
| BspPI | GGATC | 2 cut(s) | 301, 955 |
| BspQI | GCTCTTC | 1 cut(s) | 1002 |
| BspT107I | GGYRCC | 1 cut(s) | 927 |
| BsrI | ACTGG | 2 cut(s) | 526, 535 |
| BssECI | CCNNGG | 3 cut(s) | 194, 634, 943 |
| BssMI | GATC | 3 cut(s) | 293, 661, 947 |
| BssT1I | CCWWGG | 2 cut(s) | 194, 634 |
| Bst2UI | CCWGG | 3 cut(s) | 705, 945, 997 |
| Bst4CI | ACNGT | 3 cut(s) | 340, 781, 845 |
| Bst6I | CTCTTC | 1 cut(s) | 1002 |
| BstDEI | CTNAG | 3 cut(s) | 297, 576, 863 |
| BstF5I | GGATG | 4 cut(s) | 62, 382, 507, 709 |
| BstKTI | GATC | 3 cut(s) | 296, 664, 950 |
| BstMAI | GTCTC | 1 cut(s) | 572 |
| BstMBI | GATC | 3 cut(s) | 293, 661, 947 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 108, 260, 483, 1001 |
| BstNI | CCWGG | 3 cut(s) | 705, 945, 997 |
| BstNSI | RCATGY | 5 cut(s) | 29, 125, 319, 429, 733 |
| BstSCI | CCNGG | 3 cut(s) | 703, 943, 995 |
| BstX2I | RGATCY | 1 cut(s) | 293 |
| BstYI | RGATCY | 1 cut(s) | 293 |
| BsuRI | GGCC | 1 cut(s) | 557 |
| BtsCI | GGATG | 4 cut(s) | 62, 382, 507, 709 |
| Cfr13I | GGNCC | 1 cut(s) | 504 |
| Csp6I | GTAC | 2 cut(s) | 86, 698 |
| CviAII | CATG | 8 cut(s) | 26, 122, 316, 356, 426, 559, 730, 976 |
| CviJI | RGCY | 8 cut(s) | 174, 193, 302, 409, 557, 743, 862, 980 |
| CviKI_1 | RGCY | 8 cut(s) | 174, 193, 302, 409, 557, 743, 862, 980 |
| CviQI | GTAC | 2 cut(s) | 86, 698 |
| DdeI | CTNAG | 3 cut(s) | 297, 576, 863 |
| DpnI | GATC | 3 cut(s) | 295, 663, 949 |
| DpnII | GATC | 3 cut(s) | 293, 661, 947 |
| EaeI | YGGCCR | 1 cut(s) | 555 |
| Eam1104I | CTCTTC | 1 cut(s) | 1002 |
| EarI | CTCTTC | 1 cut(s) | 1002 |
| Eco130I | CCWWGG | 2 cut(s) | 194, 634 |
| Eco32I | GATATC | 2 cut(s) | 202, 240 |
| Eco47I | GGWCC | 1 cut(s) | 504 |
| Eco57I | CTGAAG | 1 cut(s) | 603 |
| EcoRII | CCWGG | 3 cut(s) | 703, 943, 995 |
| EcoRV | GATATC | 2 cut(s) | 202, 240 |
| EcoT14I | CCWWGG | 2 cut(s) | 194, 634 |
| EcoT22I | ATGCAT | 2 cut(s) | 735, 826 |
| ErhI | CCWWGG | 2 cut(s) | 194, 634 |
| FaeI | CATG | 8 cut(s) | 29, 125, 319, 359, 429, 562, 733, 979 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 90, 122 |
| FaqI | GGGAC | 1 cut(s) | 517 |
| FatI | CATG | 8 cut(s) | 25, 121, 315, 355, 425, 558, 729, 975 |
| FauNDI | CATATG | 1 cut(s) | 820 |
| FblI | GTMKAC | 1 cut(s) | 454 |
| FokI | GGATG | 4 cut(s) | 69, 369, 494, 696 |
| FspBI | CTAG | 1 cut(s) | 276 |
| HaeIII | GGCC | 1 cut(s) | 557 |
| Hin1II | CATG | 8 cut(s) | 29, 125, 319, 359, 429, 562, 733, 979 |
| HindIII | AAGCTT | 1 cut(s) | 860 |
| HinfI | GANTC | 8 cut(s) | 44, 71, 305, 359, 490, 572, 629, 983 |
| HphI | GGTGA | 1 cut(s) | 887 |
| Hpy166II | GTNNAC | 2 cut(s) | 88, 455 |
| Hpy188I | TCNGA | 4 cut(s) | 43, 298, 577, 608 |
| Hpy188III | TCNNGA | 4 cut(s) | 148, 161, 205, 917 |
| Hpy8I | GTNNAC | 2 cut(s) | 88, 455 |
| HpyAV | CCTTC | 3 cut(s) | 431, 519, 610 |
| HpyCH4III | ACNGT | 3 cut(s) | 340, 781, 845 |
| HpyCH4IV | ACGT | 2 cut(s) | 84, 952 |
| HpyCH4V | TGCA | 9 cut(s) | 96, 156, 217, 382, 733, 824, 850, 881, 935 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 108, 260, 483, 1001 |
| HpyF3I | CTNAG | 3 cut(s) | 297, 576, 863 |
| HpySE526I | ACGT | 2 cut(s) | 84, 952 |
| Hsp92II | CATG | 8 cut(s) | 29, 125, 319, 359, 429, 562, 733, 979 |
| Kzo9I | GATC | 3 cut(s) | 293, 661, 947 |
| LguI | GCTCTTC | 1 cut(s) | 1002 |
| LweI | GCATC | 4 cut(s) | 204, 391, 833, 868 |
| MaeI | CTAG | 1 cut(s) | 276 |
| MaeII | ACGT | 2 cut(s) | 84, 952 |
| MaeIII | GTNAC | 3 cut(s) | 350, 646, 725 |
| MalI | GATC | 3 cut(s) | 295, 663, 949 |
| MboI | GATC | 3 cut(s) | 293, 661, 947 |
| MboII | GAAGA | 5 cut(s) | 98, 595, 596, 808, 819 |
| MflI | RGATCY | 1 cut(s) | 293 |
| MlsI | TGGCCA | 1 cut(s) | 557 |
| MluCI | AATT | 8 cut(s) | 13, 398, 589, 745, 787, 870, 885, 922 |
| MluNI | TGGCCA | 1 cut(s) | 557 |
| MlyI | GAGTC | 1 cut(s) | 499 |
| MmeI | TCCRAC | 1 cut(s) | 631 |
| MnlI | CCTC | 5 cut(s) | 157, 292, 521, 723, 924 |
| Mox20I | TGGCCA | 1 cut(s) | 557 |
| Mph1103I | ATGCAT | 2 cut(s) | 735, 826 |
| MscI | TGGCCA | 1 cut(s) | 557 |
| MseI | TTAA | 4 cut(s) | 312, 444, 854, 990 |
| Msp20I | TGGCCA | 1 cut(s) | 557 |
| MspR9I | CCNGG | 3 cut(s) | 705, 945, 997 |
| Mva1269I | GAATGC | 1 cut(s) | 156 |
| MvaI | CCWGG | 3 cut(s) | 705, 945, 997 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 108, 260, 483, 1001 |
| NdeI | CATATG | 1 cut(s) | 820 |
| NdeII | GATC | 3 cut(s) | 293, 661, 947 |
| NlaIII | CATG | 8 cut(s) | 29, 125, 319, 359, 429, 562, 733, 979 |
| NlaIV | GGNNCC | 3 cut(s) | 7, 505, 929 |
| NsiI | ATGCAT | 2 cut(s) | 735, 826 |
| NspI | RCATGY | 5 cut(s) | 29, 125, 319, 429, 733 |
| PciI | ACATGT | 1 cut(s) | 315 |
| PciSI | GCTCTTC | 1 cut(s) | 1002 |
| PctI | GAATGC | 1 cut(s) | 156 |
| PfeI | GAWTC | 7 cut(s) | 44, 71, 305, 359, 572, 629, 983 |
| PleI | GAGTC | 1 cut(s) | 498 |
| PpsI | GAGTC | 1 cut(s) | 498 |
| PscI | ACATGT | 1 cut(s) | 315 |
| Psp6I | CCWGG | 3 cut(s) | 703, 943, 995 |
| PspGI | CCWGG | 3 cut(s) | 703, 943, 995 |
| PspN4I | GGNNCC | 3 cut(s) | 7, 505, 929 |
| PspPI | GGNCC | 1 cut(s) | 504 |
| PsuI | RGATCY | 1 cut(s) | 293 |
| RsaI | GTAC | 2 cut(s) | 87, 699 |
| RsaNI | GTAC | 2 cut(s) | 86, 698 |
| SapI | GCTCTTC | 1 cut(s) | 1002 |
| SaqAI | TTAA | 4 cut(s) | 312, 444, 854, 990 |
| Sau3AI | GATC | 3 cut(s) | 293, 661, 947 |
| Sau96I | GGNCC | 1 cut(s) | 504 |
| SchI | GAGTC | 1 cut(s) | 499 |
| ScrFI | CCNGG | 3 cut(s) | 705, 945, 997 |
| SfaNI | GCATC | 4 cut(s) | 204, 391, 833, 868 |
| SinI | GGWCC | 1 cut(s) | 504 |
| Sse9I | AATT | 8 cut(s) | 13, 398, 589, 745, 787, 870, 885, 922 |
| SspMI | CTAG | 1 cut(s) | 276 |
| StyD4I | CCNGG | 3 cut(s) | 703, 943, 995 |
| StyI | CCWWGG | 2 cut(s) | 194, 634 |
| TaaI | ACNGT | 3 cut(s) | 340, 781, 845 |
| TaiI | ACGT | 2 cut(s) | 87, 955 |
| TaqI | TCGA | 2 cut(s) | 127, 471 |
| TasI | AATT | 8 cut(s) | 13, 398, 589, 745, 787, 870, 885, 922 |
| TfiI | GAWTC | 7 cut(s) | 44, 71, 305, 359, 572, 629, 983 |
| Tru1I | TTAA | 4 cut(s) | 312, 444, 854, 990 |
| Tru9I | TTAA | 4 cut(s) | 312, 444, 854, 990 |
| TspDTI | ATGAA | 1 cut(s) | 767 |
| VpaK11BI | GGWCC | 1 cut(s) | 504 |
| XapI | RAATTY | 1 cut(s) | 787 |
| XceI | RCATGY | 5 cut(s) | 29, 125, 319, 429, 733 |
| XmiI | GTMKAC | 1 cut(s) | 454 |
| XspI | CTAG | 1 cut(s) | 276 |
| Zsp2I | ATGCAT | 2 cut(s) | 735, 826 |