isoform X1
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 670 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 617 |
| AccI | GTMKAC | 1 cut(s) | 534 |
| AciI | CCGC | 4 cut(s) | 253, 408, 654, 663 |
| AclWI | GGATC | 2 cut(s) | 601, 614 |
| AcsI | RAATTY | 1 cut(s) | 101 |
| AcyI | GRCGYC | 2 cut(s) | 286, 667 |
| AfaI | GTAC | 1 cut(s) | 381 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 259, 617 |
| AgsI | TTSAA | 6 cut(s) | 16, 177, 259, 403, 481, 559 |
| AjnI | CCWGG | 2 cut(s) | 148, 629 |
| AluBI | AGCT | 5 cut(s) | 201, 223, 238, 359, 390 |
| AluI | AGCT | 5 cut(s) | 201, 223, 238, 359, 390 |
| AlwI | GGATC | 2 cut(s) | 601, 614 |
| AoxI | GGCC | 1 cut(s) | 632 |
| ApeKI | GCWGC | 1 cut(s) | 660 |
| ApoI | RAATTY | 1 cut(s) | 101 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 311 |
| AsuC2I | CCSGG | 1 cut(s) | 585 |
| AsuHPI | GGTGA | 3 cut(s) | 176, 274, 632 |
| BamHI | GGATCC | 1 cut(s) | 606 |
| BbsI | GAAGAC | 1 cut(s) | 370 |
| BbvI | GCAGC | 1 cut(s) | 672 |
| BccI | CCATC | 2 cut(s) | 239, 619 |
| BciT130I | CCWGG | 2 cut(s) | 150, 631 |
| BcnI | CCSGG | 1 cut(s) | 585 |
| BfmI | CTRYAG | 1 cut(s) | 351 |
| BisI | GCNGC | 1 cut(s) | 661 |
| BlsI | GCNGC | 1 cut(s) | 662 |
| Bme1390I | CCNGG | 3 cut(s) | 150, 585, 631 |
| BmiI | GGNNCC | 1 cut(s) | 608 |
| BmrFI | CCNGG | 3 cut(s) | 150, 585, 631 |
| BmsI | GCATC | 3 cut(s) | 119, 258, 641 |
| BpiI | GAAGAC | 1 cut(s) | 370 |
| Bpu10I | CCTNAGC | 1 cut(s) | 54 |
| BpuMI | CCSGG | 1 cut(s) | 585 |
| BsaBI | GATNNNNATC | 2 cut(s) | 95, 546 |
| BsaHI | GRCGYC | 2 cut(s) | 286, 667 |
| BsaJI | CCNNGG | 3 cut(s) | 148, 453, 629 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 259, 617 |
| Bse8I | GATNNNNATC | 2 cut(s) | 95, 546 |
| BseBI | CCWGG | 2 cut(s) | 150, 631 |
| BseDI | CCNNGG | 3 cut(s) | 148, 453, 629 |
| BseGI | GGATG | 2 cut(s) | 249, 496 |
| BseJI | GATNNNNATC | 2 cut(s) | 95, 546 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 259, 617 |
| BseMII | CTCAG | 1 cut(s) | 291 |
| BseXI | GCAGC | 1 cut(s) | 672 |
| BseYI | CCCAGC | 1 cut(s) | 201 |
| BshFI | GGCC | 1 cut(s) | 634 |
| BsiSI | CCGG | 1 cut(s) | 585 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 259, 617 |
| BsnI | GGCC | 1 cut(s) | 634 |
| Bsp143I | GATC | 3 cut(s) | 383, 547, 606 |
| BspACI | CCGC | 4 cut(s) | 253, 408, 654, 663 |
| BspANI | GGCC | 1 cut(s) | 634 |
| BspCNI | CTCAG | 1 cut(s) | 290 |
| BspLI | GGNNCC | 1 cut(s) | 608 |
| BspPI | GGATC | 2 cut(s) | 601, 614 |
| BspQI | GCTCTTC | 1 cut(s) | 207 |
| BssECI | CCNNGG | 3 cut(s) | 148, 453, 629 |
| BssMI | GATC | 3 cut(s) | 383, 547, 606 |
| BssNI | GRCGYC | 2 cut(s) | 286, 667 |
| Bst2UI | CCWGG | 2 cut(s) | 150, 631 |
| Bst4CI | ACNGT | 2 cut(s) | 311, 494 |
| Bst6I | CTCTTC | 1 cut(s) | 207 |
| BstACI | GRCGYC | 2 cut(s) | 286, 667 |
| BstDEI | CTNAG | 3 cut(s) | 54, 277, 693 |
| BstF5I | GGATG | 2 cut(s) | 249, 496 |
| BstKTI | GATC | 3 cut(s) | 386, 550, 609 |
| BstMBI | GATC | 3 cut(s) | 383, 547, 606 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 660 |
| BstNI | CCWGG | 2 cut(s) | 150, 631 |
| BstSCI | CCNGG | 3 cut(s) | 148, 583, 629 |
| BstSFI | CTRYAG | 1 cut(s) | 351 |
| BstV1I | GCAGC | 1 cut(s) | 672 |
| BstV2I | GAAGAC | 1 cut(s) | 370 |
| BstX2I | RGATCY | 1 cut(s) | 606 |
| BstYI | RGATCY | 1 cut(s) | 606 |
| BsuRI | GGCC | 1 cut(s) | 634 |
| BtsCI | GGATG | 2 cut(s) | 249, 496 |
| BtsI | GCAGTG | 1 cut(s) | 687 |
| BtsIMutI | CAGTG | 1 cut(s) | 687 |
| CseI | GACGC | 1 cut(s) | 294 |
| Csp6I | GTAC | 1 cut(s) | 380 |
| CviAII | CATG | 2 cut(s) | 303, 551 |
| CviJI | RGCY | 6 cut(s) | 201, 223, 238, 359, 390, 634 |
| CviKI_1 | RGCY | 6 cut(s) | 201, 223, 238, 359, 390, 634 |
| CviQI | GTAC | 1 cut(s) | 380 |
| DdeI | CTNAG | 3 cut(s) | 54, 277, 693 |
| DpnI | GATC | 3 cut(s) | 385, 549, 608 |
| DpnII | GATC | 3 cut(s) | 383, 547, 606 |
| DraI | TTTAAA | 2 cut(s) | 73, 423 |
| Eam1104I | CTCTTC | 1 cut(s) | 207 |
| EarI | CTCTTC | 1 cut(s) | 207 |
| EcoRII | CCWGG | 2 cut(s) | 148, 629 |
| FaeI | CATG | 2 cut(s) | 306, 554 |
| FatI | CATG | 2 cut(s) | 302, 550 |
| FauI | CCCGC | 1 cut(s) | 401 |
| FauNDI | CATATG | 1 cut(s) | 28 |
| FblI | GTMKAC | 1 cut(s) | 534 |
| Fnu4HI | GCNGC | 1 cut(s) | 661 |
| FokI | GGATG | 2 cut(s) | 236, 483 |
| Fsp4HI | GCNGC | 1 cut(s) | 661 |
| GluI | GCNGC | 1 cut(s) | 661 |
| GsaI | CCCAGC | 1 cut(s) | 205 |
| HaeIII | GGCC | 1 cut(s) | 634 |
| HapII | CCGG | 1 cut(s) | 585 |
| HgaI | GACGC | 1 cut(s) | 294 |
| Hin1I | GRCGYC | 2 cut(s) | 286, 667 |
| Hin1II | CATG | 2 cut(s) | 306, 554 |
| HincII | GTYRAC | 1 cut(s) | 343 |
| HindII | GTYRAC | 1 cut(s) | 343 |
| HinfI | GANTC | 2 cut(s) | 188, 536 |
| HpaII | CCGG | 1 cut(s) | 585 |
| HphI | GGTGA | 3 cut(s) | 176, 274, 632 |
| Hpy166II | GTNNAC | 2 cut(s) | 343, 535 |
| Hpy188I | TCNGA | 3 cut(s) | 280, 475, 541 |
| Hpy188III | TCNNGA | 1 cut(s) | 119 |
| Hpy8I | GTNNAC | 2 cut(s) | 343, 535 |
| HpyAV | CCTTC | 1 cut(s) | 253 |
| HpyCH4III | ACNGT | 2 cut(s) | 311, 494 |
| HpyCH4IV | ACGT | 2 cut(s) | 345, 667 |
| HpyCH4V | TGCA | 2 cut(s) | 26, 687 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 660 |
| HpyF3I | CTNAG | 3 cut(s) | 54, 277, 693 |
| HpySE526I | ACGT | 2 cut(s) | 345, 667 |
| Hsp92I | GRCGYC | 2 cut(s) | 286, 667 |
| Hsp92II | CATG | 2 cut(s) | 306, 554 |
| Kzo9I | GATC | 3 cut(s) | 383, 547, 606 |
| LguI | GCTCTTC | 1 cut(s) | 207 |
| Lsp1109I | GCAGC | 1 cut(s) | 672 |
| LweI | GCATC | 3 cut(s) | 119, 258, 641 |
| MaeII | ACGT | 2 cut(s) | 345, 667 |
| MaeIII | GTNAC | 2 cut(s) | 488, 668 |
| MalI | GATC | 3 cut(s) | 385, 549, 608 |
| MboI | GATC | 3 cut(s) | 383, 547, 606 |
| MboII | GAAGA | 5 cut(s) | 100, 224, 280, 375, 443 |
| MflI | RGATCY | 1 cut(s) | 606 |
| MluCI | AATT | 6 cut(s) | 16, 47, 59, 101, 127, 417 |
| MlyI | GAGTC | 2 cut(s) | 197, 530 |
| MmeI | TCCRAC | 1 cut(s) | 498 |
| MnlI | CCTC | 6 cut(s) | 367, 448, 519, 573, 591, 597 |
| MroXI | GAANNNNTTC | 1 cut(s) | 311 |
| MseI | TTAA | 4 cut(s) | 72, 195, 207, 422 |
| MspA1I | CMGCKG | 2 cut(s) | 201, 663 |
| MspI | CCGG | 1 cut(s) | 585 |
| MspR9I | CCNGG | 3 cut(s) | 150, 585, 631 |
| MvaI | CCWGG | 2 cut(s) | 150, 631 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 660 |
| NciI | CCSGG | 1 cut(s) | 585 |
| NdeI | CATATG | 1 cut(s) | 28 |
| NdeII | GATC | 3 cut(s) | 383, 547, 606 |
| NlaIII | CATG | 2 cut(s) | 306, 554 |
| NlaIV | GGNNCC | 1 cut(s) | 608 |
| NmuCI | GTSAC | 1 cut(s) | 668 |
| PciSI | GCTCTTC | 1 cut(s) | 207 |
| PdmI | GAANNNNTTC | 1 cut(s) | 311 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 617 |
| PkrI | GCNGC | 1 cut(s) | 662 |
| PleI | GAGTC | 2 cut(s) | 196, 530 |
| PpsI | GAGTC | 2 cut(s) | 196, 530 |
| Psp6I | CCWGG | 2 cut(s) | 148, 629 |
| PspFI | CCCAGC | 1 cut(s) | 201 |
| PspGI | CCWGG | 2 cut(s) | 148, 629 |
| PspN4I | GGNNCC | 1 cut(s) | 608 |
| PsuI | RGATCY | 1 cut(s) | 606 |
| PvuII | CAGCTG | 1 cut(s) | 201 |
| RsaI | GTAC | 1 cut(s) | 381 |
| RsaNI | GTAC | 1 cut(s) | 380 |
| SapI | GCTCTTC | 1 cut(s) | 207 |
| SaqAI | TTAA | 4 cut(s) | 72, 195, 207, 422 |
| SatI | GCNGC | 1 cut(s) | 661 |
| Sau3AI | GATC | 3 cut(s) | 383, 547, 606 |
| SchI | GAGTC | 2 cut(s) | 197, 530 |
| ScrFI | CCNGG | 3 cut(s) | 150, 585, 631 |
| SfaNI | GCATC | 3 cut(s) | 119, 258, 641 |
| SfcI | CTRYAG | 1 cut(s) | 351 |
| Sse9I | AATT | 6 cut(s) | 16, 47, 59, 101, 127, 417 |
| SsiI | CCGC | 4 cut(s) | 253, 408, 654, 663 |
| StyD4I | CCNGG | 3 cut(s) | 148, 583, 629 |
| TaaI | ACNGT | 2 cut(s) | 311, 494 |
| TaiI | ACGT | 2 cut(s) | 348, 670 |
| TaqI | TCGA | 1 cut(s) | 243 |
| TasI | AATT | 6 cut(s) | 16, 47, 59, 101, 127, 417 |
| Tru1I | TTAA | 4 cut(s) | 72, 195, 207, 422 |
| Tru9I | TTAA | 4 cut(s) | 72, 195, 207, 422 |
| TscAI | CASTG | 1 cut(s) | 694 |
| TseFI | GTSAC | 1 cut(s) | 668 |
| TseI | GCWGC | 1 cut(s) | 660 |
| Tsp45I | GTSAC | 1 cut(s) | 668 |
| TspDTI | ATGAA | 4 cut(s) | 138, 281, 287, 444 |
| TspRI | CASTG | 1 cut(s) | 694 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 617 |
| XapI | RAATTY | 1 cut(s) | 101 |
| XmiI | GTMKAC | 1 cut(s) | 534 |
| XmnI | GAANNNNTTC | 1 cut(s) | 311 |
| ZraI | GACGTC | 1 cut(s) | 668 |