isoform X1
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 498 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 30 |
| AciI | CCGC | 2 cut(s) | 91, 155 |
| AcoI | YGGCCR | 3 cut(s) | 412, 416, 478 |
| AcyI | GRCGYC | 1 cut(s) | 499 |
| AfaI | GTAC | 1 cut(s) | 520 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 30 |
| AflIII | ACRYGT | 1 cut(s) | 515 |
| AgsI | TTSAA | 3 cut(s) | 70, 131, 372 |
| AluBI | AGCT | 3 cut(s) | 297, 365, 511 |
| AluI | AGCT | 3 cut(s) | 297, 365, 511 |
| Alw26I | GTCTC | 1 cut(s) | 113 |
| AoxI | GGCC | 4 cut(s) | 404, 412, 416, 478 |
| ApeKI | GCWGC | 3 cut(s) | 230, 362, 443 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 25, 57 |
| AseI | ATTAAT | 1 cut(s) | 201 |
| AspLEI | GCGC | 1 cut(s) | 501 |
| AspS9I | GGNCC | 1 cut(s) | 33 |
| AsuHPI | GGTGA | 1 cut(s) | 500 |
| AsuII | TTCGAA | 1 cut(s) | 430 |
| AvaII | GGWCC | 1 cut(s) | 33 |
| BanI | GGYRCC | 1 cut(s) | 498 |
| BbvI | GCAGC | 3 cut(s) | 217, 374, 455 |
| BccI | CCATC | 1 cut(s) | 415 |
| BceAI | ACGGC | 2 cut(s) | 171, 262 |
| BcoDI | GTCTC | 1 cut(s) | 113 |
| BfaI | CTAG | 2 cut(s) | 114, 366 |
| BfmI | CTRYAG | 2 cut(s) | 298, 441 |
| BfoI | RGCGCY | 1 cut(s) | 502 |
| BisI | GCNGC | 4 cut(s) | 92, 231, 363, 444 |
| BlsI | GCNGC | 4 cut(s) | 93, 232, 364, 445 |
| Bme18I | GGWCC | 1 cut(s) | 33 |
| BmgT120I | GGNCC | 1 cut(s) | 33 |
| BmiI | GGNNCC | 2 cut(s) | 255, 500 |
| BmsI | GCATC | 2 cut(s) | 29, 349 |
| Bpu14I | TTCGAA | 1 cut(s) | 430 |
| BsaHI | GRCGYC | 1 cut(s) | 499 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 50, 80 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 30 |
| Bse118I | RCCGGY | 2 cut(s) | 414, 480 |
| BseGI | GGATG | 3 cut(s) | 20, 325, 407 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 30 |
| BseX3I | CGGCCG | 1 cut(s) | 412 |
| BseXI | GCAGC | 3 cut(s) | 217, 374, 455 |
| BsgI | GTGCAG | 1 cut(s) | 507 |
| Bsh1285I | CGRYCG | 1 cut(s) | 415 |
| BshFI | GGCC | 4 cut(s) | 406, 414, 418, 480 |
| BshNI | GGYRCC | 1 cut(s) | 498 |
| BsiEI | CGRYCG | 1 cut(s) | 415 |
| BsiSI | CCGG | 3 cut(s) | 411, 415, 481 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 30 |
| BsmAI | GTCTC | 1 cut(s) | 113 |
| BsnI | GGCC | 4 cut(s) | 406, 414, 418, 480 |
| Bsp119I | TTCGAA | 1 cut(s) | 430 |
| Bsp143I | GATC | 1 cut(s) | 160 |
| BspACI | CCGC | 2 cut(s) | 91, 155 |
| BspANI | GGCC | 4 cut(s) | 406, 414, 418, 480 |
| BspLI | GGNNCC | 2 cut(s) | 255, 500 |
| BspMAI | CTGCAG | 1 cut(s) | 445 |
| BspT104I | TTCGAA | 1 cut(s) | 430 |
| BspT107I | GGYRCC | 1 cut(s) | 498 |
| BsrFI | RCCGGY | 2 cut(s) | 414, 480 |
| BssAI | RCCGGY | 2 cut(s) | 414, 480 |
| BssMI | GATC | 1 cut(s) | 160 |
| BssNI | GRCGYC | 1 cut(s) | 499 |
| Bst4CI | ACNGT | 1 cut(s) | 124 |
| BstACI | GRCGYC | 1 cut(s) | 499 |
| BstBI | TTCGAA | 1 cut(s) | 430 |
| BstC8I | GCNNGC | 1 cut(s) | 416 |
| BstDEI | CTNAG | 1 cut(s) | 6 |
| BstF5I | GGATG | 3 cut(s) | 20, 325, 407 |
| BstH2I | RGCGCY | 1 cut(s) | 502 |
| BstHHI | GCGC | 1 cut(s) | 501 |
| BstKTI | GATC | 1 cut(s) | 163 |
| BstMAI | GTCTC | 1 cut(s) | 113 |
| BstMBI | GATC | 1 cut(s) | 160 |
| BstMCI | CGRYCG | 1 cut(s) | 415 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 230 |
| BstNSI | RCATGY | 1 cut(s) | 224 |
| BstSFI | CTRYAG | 2 cut(s) | 298, 441 |
| BstV1I | GCAGC | 3 cut(s) | 217, 374, 455 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 245 |
| BstZI | CGGCCG | 1 cut(s) | 412 |
| BsuRI | GGCC | 4 cut(s) | 406, 414, 418, 480 |
| BtsCI | GGATG | 3 cut(s) | 20, 325, 407 |
| BtsIMutI | CAGTG | 1 cut(s) | 156 |
| Cac8I | GCNNGC | 1 cut(s) | 416 |
| CfoI | GCGC | 1 cut(s) | 501 |
| Cfr10I | RCCGGY | 2 cut(s) | 414, 480 |
| Cfr13I | GGNCC | 1 cut(s) | 33 |
| Csp6I | GTAC | 1 cut(s) | 519 |
| CviAII | CATG | 3 cut(s) | 213, 221, 317 |
| CviQI | GTAC | 1 cut(s) | 519 |
| DdeI | CTNAG | 1 cut(s) | 6 |
| DinI | GGCGCC | 1 cut(s) | 500 |
| DpnI | GATC | 1 cut(s) | 162 |
| DpnII | GATC | 1 cut(s) | 160 |
| EaeI | YGGCCR | 3 cut(s) | 412, 416, 478 |
| EagI | CGGCCG | 1 cut(s) | 412 |
| EclXI | CGGCCG | 1 cut(s) | 412 |
| Eco47I | GGWCC | 1 cut(s) | 33 |
| Eco52I | CGGCCG | 1 cut(s) | 412 |
| EgeI | GGCGCC | 1 cut(s) | 500 |
| EheI | GGCGCC | 1 cut(s) | 500 |
| FaeI | CATG | 3 cut(s) | 216, 224, 320 |
| FaiI | YATR | 8 cut(s) | 110, 214, 222, 264, 318, 332, 341, 354 |
| FatI | CATG | 3 cut(s) | 212, 220, 316 |
| Fnu4HI | GCNGC | 4 cut(s) | 92, 231, 363, 444 |
| FokI | GGATG | 3 cut(s) | 7, 312, 394 |
| FseI | GGCCGGCC | 1 cut(s) | 418 |
| Fsp4HI | GCNGC | 4 cut(s) | 92, 231, 363, 444 |
| FspBI | CTAG | 2 cut(s) | 114, 366 |
| GlaI | GCGC | 1 cut(s) | 500 |
| GluI | GCNGC | 4 cut(s) | 92, 231, 363, 444 |
| HaeII | RGCGCY | 1 cut(s) | 502 |
| HaeIII | GGCC | 4 cut(s) | 406, 414, 418, 480 |
| HapII | CCGG | 3 cut(s) | 411, 415, 481 |
| HhaI | GCGC | 1 cut(s) | 501 |
| Hin1I | GRCGYC | 1 cut(s) | 499 |
| Hin1II | CATG | 3 cut(s) | 216, 224, 320 |
| Hin6I | GCGC | 1 cut(s) | 499 |
| HinP1I | GCGC | 1 cut(s) | 499 |
| HinfI | GANTC | 1 cut(s) | 305 |
| HpaII | CCGG | 3 cut(s) | 411, 415, 481 |
| HphI | GGTGA | 1 cut(s) | 500 |
| Hpy166II | GTNNAC | 3 cut(s) | 33, 218, 519 |
| Hpy188I | TCNGA | 2 cut(s) | 7, 142 |
| Hpy8I | GTNNAC | 3 cut(s) | 33, 218, 519 |
| HpyAV | CCTTC | 2 cut(s) | 7, 443 |
| HpyCH4III | ACNGT | 1 cut(s) | 124 |
| HpyCH4IV | ACGT | 1 cut(s) | 515 |
| HpyCH4V | TGCA | 5 cut(s) | 20, 233, 362, 443, 524 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 230 |
| HpyF3I | CTNAG | 1 cut(s) | 6 |
| HpySE526I | ACGT | 1 cut(s) | 515 |
| Hsp92I | GRCGYC | 1 cut(s) | 499 |
| Hsp92II | CATG | 3 cut(s) | 216, 224, 320 |
| HspAI | GCGC | 1 cut(s) | 499 |
| KasI | GGCGCC | 1 cut(s) | 498 |
| KroI | GCCGGC | 1 cut(s) | 414 |
| KroNI | GCCGGC | 1 cut(s) | 416 |
| Kzo9I | GATC | 1 cut(s) | 160 |
| LpnPI | CCDG | 6 cut(s) | 270, 286, 301, 424, 428, 494 |
| Lsp1109I | GCAGC | 3 cut(s) | 217, 374, 455 |
| LweI | GCATC | 2 cut(s) | 29, 349 |
| MaeI | CTAG | 2 cut(s) | 114, 366 |
| MaeII | ACGT | 1 cut(s) | 515 |
| MaeIII | GTNAC | 1 cut(s) | 266 |
| MalI | GATC | 1 cut(s) | 162 |
| MboI | GATC | 1 cut(s) | 160 |
| MboII | GAAGA | 2 cut(s) | 82, 368 |
| MluCI | AATT | 3 cut(s) | 198, 202, 528 |
| Mly113I | GGCGCC | 1 cut(s) | 499 |
| MmeI | TCCRAC | 1 cut(s) | 226 |
| MnlI | CCTC | 8 cut(s) | 3, 21, 52, 60, 396, 399, 446, 456 |
| MroNI | GCCGGC | 1 cut(s) | 414 |
| MseI | TTAA | 2 cut(s) | 201, 384 |
| MslI | CAYNNNNRTG | 1 cut(s) | 211 |
| MspI | CCGG | 3 cut(s) | 411, 415, 481 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 230 |
| NaeI | GCCGGC | 1 cut(s) | 416 |
| NarI | GGCGCC | 1 cut(s) | 499 |
| NdeII | GATC | 1 cut(s) | 160 |
| NgoMIV | GCCGGC | 1 cut(s) | 414 |
| NlaIII | CATG | 3 cut(s) | 216, 224, 320 |
| NlaIV | GGNNCC | 2 cut(s) | 255, 500 |
| NspI | RCATGY | 1 cut(s) | 224 |
| NspV | TTCGAA | 1 cut(s) | 430 |
| PdiI | GCCGGC | 1 cut(s) | 416 |
| PfeI | GAWTC | 1 cut(s) | 305 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 30 |
| PkrI | GCNGC | 4 cut(s) | 93, 232, 364, 445 |
| PluTI | GGCGCC | 1 cut(s) | 502 |
| PshBI | ATTAAT | 1 cut(s) | 201 |
| PspN4I | GGNNCC | 2 cut(s) | 255, 500 |
| PspPI | GGNCC | 1 cut(s) | 33 |
| PstI | CTGCAG | 1 cut(s) | 445 |
| RigI | GGCCGGCC | 1 cut(s) | 418 |
| RsaI | GTAC | 1 cut(s) | 520 |
| RsaNI | GTAC | 1 cut(s) | 519 |
| RseI | CAYNNNNRTG | 1 cut(s) | 211 |
| SaqAI | TTAA | 2 cut(s) | 201, 384 |
| SatI | GCNGC | 4 cut(s) | 92, 231, 363, 444 |
| Sau3AI | GATC | 1 cut(s) | 160 |
| Sau96I | GGNCC | 1 cut(s) | 33 |
| SetI | ASST | 9 cut(s) | 18, 32, 246, 259, 290, 299, 367, 513, 518 |
| SfaNI | GCATC | 2 cut(s) | 29, 349 |
| SfcI | CTRYAG | 2 cut(s) | 298, 441 |
| SfoI | GGCGCC | 1 cut(s) | 500 |
| SfuI | TTCGAA | 1 cut(s) | 430 |
| SinI | GGWCC | 1 cut(s) | 33 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 211 |
| Sse9I | AATT | 3 cut(s) | 198, 202, 528 |
| SsiI | CCGC | 2 cut(s) | 91, 155 |
| SspDI | GGCGCC | 1 cut(s) | 498 |
| SspMI | CTAG | 2 cut(s) | 114, 366 |
| TaaI | ACNGT | 1 cut(s) | 124 |
| TaiI | ACGT | 1 cut(s) | 518 |
| TaqI | TCGA | 1 cut(s) | 430 |
| TasI | AATT | 3 cut(s) | 198, 202, 528 |
| TatI | WGTACW | 1 cut(s) | 518 |
| TauI | GCSGC | 1 cut(s) | 94 |
| TfiI | GAWTC | 1 cut(s) | 305 |
| Tru1I | TTAA | 2 cut(s) | 201, 384 |
| Tru9I | TTAA | 2 cut(s) | 201, 384 |
| TscAI | CASTG | 1 cut(s) | 156 |
| TseI | GCWGC | 3 cut(s) | 230, 362, 443 |
| TspDTI | ATGAA | 5 cut(s) | 125, 195, 314, 369, 449 |
| TspRI | CASTG | 1 cut(s) | 156 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 30 |
| VpaK11BI | GGWCC | 1 cut(s) | 33 |
| VspI | ATTAAT | 1 cut(s) | 201 |
| XceI | RCATGY | 1 cut(s) | 224 |
| XspI | CTAG | 2 cut(s) | 114, 366 |