MuDR family transposase
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 606 |
| AasI | GACNNNNNNGTC | 2 cut(s) | 68, 1456 |
| AccB1I | GGYRCC | 1 cut(s) | 1437 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 589 |
| AccI | GTMKAC | 1 cut(s) | 668 |
| AccII | CGCG | 2 cut(s) | 405, 460 |
| AccIII | TCCGGA | 1 cut(s) | 471 |
| AciI | CCGC | 4 cut(s) | 344, 1021, 1337, 1405 |
| AclWI | GGATC | 2 cut(s) | 828, 841 |
| AcoI | YGGCCR | 1 cut(s) | 630 |
| AcsI | RAATTY | 8 cut(s) | 239, 260, 462, 525, 636, 744, 803, 1253 |
| AcuI | CTGAAG | 1 cut(s) | 954 |
| AcyI | GRCGYC | 1 cut(s) | 1438 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 182, 589 |
| AjnI | CCWGG | 3 cut(s) | 9, 909, 1300 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 401, 433 |
| AluBI | AGCT | 5 cut(s) | 378, 1043, 1140, 1375, 1488 |
| AluI | AGCT | 5 cut(s) | 378, 1043, 1140, 1375, 1488 |
| Alw21I | GWGCWC | 1 cut(s) | 1328 |
| Alw26I | GTCTC | 1 cut(s) | 204 |
| AlwI | GGATC | 2 cut(s) | 828, 841 |
| Aor13HI | TCCGGA | 1 cut(s) | 471 |
| AoxI | GGCC | 3 cut(s) | 630, 986, 1030 |
| ApeKI | GCWGC | 3 cut(s) | 1375, 1430, 1445 |
| ApoI | RAATTY | 8 cut(s) | 239, 260, 462, 525, 636, 744, 803, 1253 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 488, 520, 804, 836 |
| AseI | ATTAAT | 1 cut(s) | 1395 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1044 |
| AspLEI | GCGC | 3 cut(s) | 407, 460, 1440 |
| AspS9I | GGNCC | 1 cut(s) | 986 |
| AsuHPI | GGTGA | 2 cut(s) | 997, 1420 |
| AsuII | TTCGAA | 1 cut(s) | 529 |
| BaeGI | GKGCMC | 1 cut(s) | 875 |
| BalI | TGGCCA | 1 cut(s) | 632 |
| BamHI | GGATCC | 1 cut(s) | 833 |
| BanI | GGYRCC | 1 cut(s) | 1437 |
| BbsI | GAAGAC | 3 cut(s) | 218, 710, 1269 |
| Bbv12I | GWGCWC | 1 cut(s) | 1328 |
| BbvI | GCAGC | 3 cut(s) | 1362, 1417, 1457 |
| BccI | CCATC | 5 cut(s) | 128, 481, 824, 1129, 1226 |
| BceAI | ACGGC | 2 cut(s) | 664, 1425 |
| BciT130I | CCWGG | 3 cut(s) | 11, 911, 1302 |
| BcoDI | GTCTC | 1 cut(s) | 204 |
| BfaI | CTAG | 1 cut(s) | 1259 |
| BfmI | CTRYAG | 2 cut(s) | 789, 921 |
| BfoI | RGCGCY | 1 cut(s) | 1441 |
| BisI | GCNGC | 3 cut(s) | 1376, 1431, 1446 |
| BlsI | GCNGC | 3 cut(s) | 1377, 1432, 1447 |
| Bme1390I | CCNGG | 3 cut(s) | 11, 911, 1302 |
| BmgT120I | GGNCC | 1 cut(s) | 986 |
| BmiI | GGNNCC | 3 cut(s) | 835, 987, 1439 |
| BmrFI | CCNGG | 3 cut(s) | 11, 911, 1302 |
| BmrI | ACTGGG | 1 cut(s) | 888 |
| BmsI | GCATC | 2 cut(s) | 76, 682 |
| BmuI | ACTGGG | 1 cut(s) | 888 |
| BpiI | GAAGAC | 3 cut(s) | 218, 710, 1269 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 122, 154 |
| Bpu14I | TTCGAA | 1 cut(s) | 529 |
| BpuEI | CTTGAG | 2 cut(s) | 165, 752 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1120 |
| BsaHI | GRCGYC | 1 cut(s) | 1438 |
| BsaJI | CCNNGG | 5 cut(s) | 583, 895, 909, 1227, 1300 |
| BsaWI | WCCGGW | 1 cut(s) | 471 |
| BsaXI | ACNNNNNCTCC | 1 cut(s) | 1474 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 182, 589 |
| Bse1I | ACTGG | 2 cut(s) | 883, 1154 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1120 |
| BseAI | TCCGGA | 1 cut(s) | 471 |
| BseBI | CCWGG | 3 cut(s) | 11, 911, 1302 |
| BseDI | CCNNGG | 5 cut(s) | 583, 895, 909, 1227, 1300 |
| BseGI | GGATG | 5 cut(s) | 10, 109, 139, 157, 1237 |
| BseJI | GATNNNNATC | 1 cut(s) | 1120 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 182, 589 |
| BseMII | CTCAG | 2 cut(s) | 81, 686 |
| BseNI | ACTGG | 2 cut(s) | 883, 1154 |
| BseRI | GAGGAG | 2 cut(s) | 165, 168 |
| BseSI | GKGCMC | 1 cut(s) | 875 |
| BseXI | GCAGC | 3 cut(s) | 1362, 1417, 1457 |
| BseYI | CCCAGC | 1 cut(s) | 868 |
| BsgI | GTGCAG | 1 cut(s) | 1464 |
| Bsh1236I | CGCG | 2 cut(s) | 405, 460 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1021 |
| BshFI | GGCC | 3 cut(s) | 632, 988, 1032 |
| BshNI | GGYRCC | 1 cut(s) | 1437 |
| BsiEI | CGRYCG | 1 cut(s) | 1021 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1328 |
| BsiSI | CCGG | 1 cut(s) | 472 |
| BslFI | GGGAC | 2 cut(s) | 281, 891 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 182, 589 |
| BsmAI | GTCTC | 1 cut(s) | 204 |
| BsmFI | GGGAC | 2 cut(s) | 281, 891 |
| BsnI | GGCC | 3 cut(s) | 632, 988, 1032 |
| Bsp119I | TTCGAA | 1 cut(s) | 529 |
| Bsp1286I | GDGCHC | 2 cut(s) | 875, 1328 |
| Bsp13I | TCCGGA | 1 cut(s) | 471 |
| Bsp143I | GATC | 2 cut(s) | 224, 833 |
| Bsp19I | CCATGG | 1 cut(s) | 583 |
| BspACI | CCGC | 4 cut(s) | 344, 1021, 1337, 1405 |
| BspANI | GGCC | 3 cut(s) | 632, 988, 1032 |
| BspCNI | CTCAG | 2 cut(s) | 82, 685 |
| BspEI | TCCGGA | 1 cut(s) | 471 |
| BspFNI | CGCG | 2 cut(s) | 405, 460 |
| BspHI | TCATGA | 2 cut(s) | 202, 354 |
| BspLI | GGNNCC | 3 cut(s) | 835, 987, 1439 |
| BspPI | GGATC | 2 cut(s) | 828, 841 |
| BspT104I | TTCGAA | 1 cut(s) | 529 |
| BspT107I | GGYRCC | 1 cut(s) | 1437 |
| BsrI | ACTGG | 2 cut(s) | 883, 1154 |
| BssECI | CCNNGG | 5 cut(s) | 583, 895, 909, 1227, 1300 |
| BssMI | GATC | 2 cut(s) | 224, 833 |
| BssNAI | GTATAC | 1 cut(s) | 669 |
| BssNI | GRCGYC | 1 cut(s) | 1438 |
| BssT1I | CCWWGG | 3 cut(s) | 583, 895, 1227 |
| Bst1107I | GTATAC | 1 cut(s) | 669 |
| Bst2UI | CCWGG | 3 cut(s) | 11, 911, 1302 |
| Bst4CI | ACNGT | 2 cut(s) | 82, 725 |
| Bst6I | CTCTTC | 3 cut(s) | 93, 123, 773 |
| BstACI | GRCGYC | 1 cut(s) | 1438 |
| BstBI | TTCGAA | 1 cut(s) | 529 |
| BstC8I | GCNNGC | 2 cut(s) | 363, 380 |
| BstDEI | CTNAG | 3 cut(s) | 90, 672, 961 |
| BstDSI | CCRYGG | 1 cut(s) | 583 |
| BstEII | GGTNACC | 1 cut(s) | 890 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 180 |
| BstF5I | GGATG | 5 cut(s) | 10, 109, 139, 157, 1237 |
| BstFNI | CGCG | 2 cut(s) | 405, 460 |
| BstH2I | RGCGCY | 1 cut(s) | 1441 |
| BstHHI | GCGC | 3 cut(s) | 407, 460, 1440 |
| BstKTI | GATC | 2 cut(s) | 227, 836 |
| BstMAI | GTCTC | 1 cut(s) | 204 |
| BstMBI | GATC | 2 cut(s) | 224, 833 |
| BstMCI | CGRYCG | 1 cut(s) | 1021 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 1029, 1375 |
| BstNI | CCWGG | 3 cut(s) | 11, 911, 1302 |
| BstNSI | RCATGY | 1 cut(s) | 365 |
| BstPI | GGTNACC | 1 cut(s) | 890 |
| BstSCI | CCNGG | 3 cut(s) | 9, 909, 1300 |
| BstSFI | CTRYAG | 2 cut(s) | 789, 921 |
| BstSLI | GKGCMC | 1 cut(s) | 875 |
| BstUI | CGCG | 2 cut(s) | 405, 460 |
| BstV1I | GCAGC | 3 cut(s) | 1362, 1417, 1457 |
| BstV2I | GAAGAC | 3 cut(s) | 218, 710, 1269 |
| BstX2I | RGATCY | 1 cut(s) | 833 |
| BstYI | RGATCY | 1 cut(s) | 833 |
| BstZ17I | GTATAC | 1 cut(s) | 669 |
| BsuRI | GGCC | 3 cut(s) | 632, 988, 1032 |
| BtgI | CCRYGG | 1 cut(s) | 583 |
| BtgZI | GCGATG | 1 cut(s) | 666 |
| BtsCI | GGATG | 5 cut(s) | 10, 109, 139, 157, 1237 |
| BtsIMutI | CAGTG | 1 cut(s) | 721 |
| Cac8I | GCNNGC | 2 cut(s) | 363, 380 |
| CciI | TCATGA | 2 cut(s) | 202, 354 |
| CfoI | GCGC | 3 cut(s) | 407, 460, 1440 |
| Cfr13I | GGNCC | 1 cut(s) | 986 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1216, 1251 |
| DdeI | CTNAG | 3 cut(s) | 90, 672, 961 |
| DinI | GGCGCC | 1 cut(s) | 1439 |
| DpnI | GATC | 2 cut(s) | 226, 835 |
| DpnII | GATC | 2 cut(s) | 224, 833 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 68, 1456 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 68, 1456 |
| EaeI | YGGCCR | 1 cut(s) | 630 |
| Eam1104I | CTCTTC | 3 cut(s) | 93, 123, 773 |
| EarI | CTCTTC | 3 cut(s) | 93, 123, 773 |
| EciI | GGCGGA | 1 cut(s) | 1352 |
| Eco130I | CCWWGG | 3 cut(s) | 583, 895, 1227 |
| Eco147I | AGGCCT | 1 cut(s) | 1032 |
| Eco32I | GATATC | 1 cut(s) | 58 |
| Eco57I | CTGAAG | 1 cut(s) | 954 |
| Eco91I | GGTNACC | 1 cut(s) | 890 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 180 |
| EcoO65I | GGTNACC | 1 cut(s) | 890 |
| EcoRI | GAATTC | 1 cut(s) | 462 |
| EcoRII | CCWGG | 3 cut(s) | 9, 909, 1300 |
| EcoRV | GATATC | 1 cut(s) | 58 |
| EcoT14I | CCWWGG | 3 cut(s) | 583, 895, 1227 |
| EcoT22I | ATGCAT | 2 cut(s) | 613, 697 |
| EgeI | GGCGCC | 1 cut(s) | 1439 |
| EheI | GGCGCC | 1 cut(s) | 1439 |
| ErhI | CCWWGG | 3 cut(s) | 583, 895, 1227 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 752, 784, 1020, 1052 |
| FaqI | GGGAC | 2 cut(s) | 281, 891 |
| FauI | CCCGC | 1 cut(s) | 1398 |
| FauNDI | CATATG | 1 cut(s) | 1212 |
| FblI | GTMKAC | 1 cut(s) | 668 |
| Fnu4HI | GCNGC | 3 cut(s) | 1376, 1431, 1446 |
| FokI | GGATG | 5 cut(s) | 17, 116, 146, 164, 1244 |
| Fsp4HI | GCNGC | 3 cut(s) | 1376, 1431, 1446 |
| FspBI | CTAG | 1 cut(s) | 1259 |
| GlaI | GCGC | 3 cut(s) | 406, 459, 1439 |
| GluI | GCNGC | 3 cut(s) | 1376, 1431, 1446 |
| GsaI | CCCAGC | 1 cut(s) | 872 |
| HaeII | RGCGCY | 1 cut(s) | 1441 |
| HaeIII | GGCC | 3 cut(s) | 632, 988, 1032 |
| HapII | CCGG | 1 cut(s) | 472 |
| HhaI | GCGC | 3 cut(s) | 407, 460, 1440 |
| Hin1I | GRCGYC | 1 cut(s) | 1438 |
| Hin6I | GCGC | 3 cut(s) | 405, 458, 1438 |
| HinP1I | GCGC | 3 cut(s) | 405, 458, 1438 |
| HincII | GTYRAC | 2 cut(s) | 928, 1461 |
| HindII | GTYRAC | 2 cut(s) | 928, 1461 |
| HinfI | GANTC | 9 cut(s) | 400, 414, 468, 659, 716, 765, 929, 1064, 1340 |
| HpaII | CCGG | 1 cut(s) | 472 |
| HphI | GGTGA | 2 cut(s) | 997, 1420 |
| Hpy166II | GTNNAC | 4 cut(s) | 646, 669, 928, 1461 |
| Hpy188I | TCNGA | 4 cut(s) | 934, 1018, 1069, 1110 |
| Hpy188III | TCNNGA | 9 cut(s) | 203, 319, 355, 472, 827, 1037, 1125, 1168, 1259 |
| Hpy8I | GTNNAC | 4 cut(s) | 646, 669, 928, 1461 |
| Hpy99I | CGWCG | 2 cut(s) | 667, 743 |
| HpyAV | CCTTC | 5 cut(s) | 362, 788, 1018, 1043, 1389 |
| HpyCH4III | ACNGT | 2 cut(s) | 82, 725 |
| HpyCH4IV | ACGT | 1 cut(s) | 754 |
| HpyCH4V | TGCA | 9 cut(s) | 279, 311, 365, 611, 695, 810, 1249, 1433, 1445 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 1029, 1375 |
| HpyF3I | CTNAG | 3 cut(s) | 90, 672, 961 |
| HpySE526I | ACGT | 1 cut(s) | 754 |
| Hsp92I | GRCGYC | 1 cut(s) | 1438 |
| HspAI | GCGC | 3 cut(s) | 405, 458, 1438 |
| KasI | GGCGCC | 1 cut(s) | 1437 |
| Kpn2I | TCCGGA | 1 cut(s) | 471 |
| Kzo9I | GATC | 2 cut(s) | 224, 833 |
| LmnI | GCTCC | 3 cut(s) | 178, 331, 1189 |
| Lsp1109I | GCAGC | 3 cut(s) | 1362, 1417, 1457 |
| LweI | GCATC | 2 cut(s) | 76, 682 |
| MaeI | CTAG | 1 cut(s) | 1259 |
| MaeII | ACGT | 1 cut(s) | 754 |
| MaeIII | GTNAC | 5 cut(s) | 337, 797, 890, 1145, 1193 |
| MalI | GATC | 2 cut(s) | 226, 835 |
| MboI | GATC | 2 cut(s) | 224, 833 |
| MboII | GAAGA | 9 cut(s) | 110, 140, 223, 409, 715, 760, 895, 947, 1274 |
| MfeI | CAATTG | 2 cut(s) | 946, 1388 |
| MflI | RGATCY | 1 cut(s) | 833 |
| MhlI | GDGCHC | 2 cut(s) | 875, 1328 |
| MlsI | TGGCCA | 1 cut(s) | 632 |
| MluNI | TGGCCA | 1 cut(s) | 632 |
| Mly113I | GGCGCC | 1 cut(s) | 1438 |
| MlyI | GAGTC | 4 cut(s) | 462, 759, 923, 1349 |
| MmeI | TCCRAC | 1 cut(s) | 1041 |
| Mox20I | TGGCCA | 1 cut(s) | 632 |
| Mph1103I | ATGCAT | 2 cut(s) | 613, 697 |
| MroI | TCCGGA | 1 cut(s) | 471 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1044 |
| MscI | TGGCCA | 1 cut(s) | 632 |
| MseI | TTAA | 2 cut(s) | 426, 1395 |
| MslI | CAYNNNNRTG | 3 cut(s) | 582, 651, 1211 |
| Msp20I | TGGCCA | 1 cut(s) | 632 |
| MspA1I | CMGCKG | 1 cut(s) | 344 |
| MspI | CCGG | 1 cut(s) | 472 |
| MspR9I | CCNGG | 3 cut(s) | 11, 911, 1302 |
| MunI | CAATTG | 2 cut(s) | 946, 1388 |
| MvaI | CCWGG | 3 cut(s) | 11, 911, 1302 |
| MvnI | CGCG | 2 cut(s) | 405, 460 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 1029, 1375 |
| NarI | GGCGCC | 1 cut(s) | 1438 |
| NcoI | CCATGG | 1 cut(s) | 583 |
| NdeI | CATATG | 1 cut(s) | 1212 |
| NdeII | GATC | 2 cut(s) | 224, 833 |
| NlaIV | GGNNCC | 3 cut(s) | 835, 987, 1439 |
| NsiI | ATGCAT | 2 cut(s) | 613, 697 |
| NspI | RCATGY | 1 cut(s) | 365 |
| NspV | TTCGAA | 1 cut(s) | 529 |
| PaeI | GCATGC | 1 cut(s) | 365 |
| PagI | TCATGA | 2 cut(s) | 202, 354 |
| PceI | AGGCCT | 1 cut(s) | 1032 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 760 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1044 |
| PfeI | GAWTC | 5 cut(s) | 400, 414, 659, 716, 1064 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 589 |
| PkrI | GCNGC | 3 cut(s) | 1377, 1432, 1447 |
| PleI | GAGTC | 4 cut(s) | 462, 759, 923, 1348 |
| PluTI | GGCGCC | 1 cut(s) | 1441 |
| PpsI | GAGTC | 4 cut(s) | 462, 759, 923, 1348 |
| PshBI | ATTAAT | 1 cut(s) | 1395 |
| PsiI | TTATAA | 1 cut(s) | 606 |
| Psp6I | CCWGG | 3 cut(s) | 9, 909, 1300 |
| PspEI | GGTNACC | 1 cut(s) | 890 |
| PspFI | CCCAGC | 1 cut(s) | 868 |
| PspGI | CCWGG | 3 cut(s) | 9, 909, 1300 |
| PspN4I | GGNNCC | 3 cut(s) | 835, 987, 1439 |
| PspPI | GGNCC | 1 cut(s) | 986 |
| PsuI | RGATCY | 1 cut(s) | 833 |
| RseI | CAYNNNNRTG | 3 cut(s) | 582, 651, 1211 |
| SaqAI | TTAA | 2 cut(s) | 426, 1395 |
| SatI | GCNGC | 3 cut(s) | 1376, 1431, 1446 |
| Sau3AI | GATC | 2 cut(s) | 224, 833 |
| Sau96I | GGNCC | 1 cut(s) | 986 |
| SchI | GAGTC | 4 cut(s) | 462, 759, 923, 1349 |
| ScrFI | CCNGG | 3 cut(s) | 11, 911, 1302 |
| SduI | GDGCHC | 2 cut(s) | 875, 1328 |
| SfaNI | GCATC | 2 cut(s) | 76, 682 |
| SfcI | CTRYAG | 2 cut(s) | 789, 921 |
| SfoI | GGCGCC | 1 cut(s) | 1439 |
| SfuI | TTCGAA | 1 cut(s) | 529 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 582, 651, 1211 |
| SmlI | CTYRAG | 2 cut(s) | 180, 731 |
| SmoI | CTYRAG | 2 cut(s) | 180, 731 |
| SphI | GCATGC | 1 cut(s) | 365 |
| SseBI | AGGCCT | 1 cut(s) | 1032 |
| SsiI | CCGC | 4 cut(s) | 344, 1021, 1337, 1405 |
| SspDI | GGCGCC | 1 cut(s) | 1437 |
| SspI | AATATT | 1 cut(s) | 970 |
| SspMI | CTAG | 1 cut(s) | 1259 |
| StuI | AGGCCT | 1 cut(s) | 1032 |
| StyD4I | CCNGG | 3 cut(s) | 9, 909, 1300 |
| StyI | CCWWGG | 3 cut(s) | 583, 895, 1227 |
| TaaI | ACNGT | 2 cut(s) | 82, 725 |
| TaiI | ACGT | 1 cut(s) | 757 |
| TaqI | TCGA | 6 cut(s) | 60, 84, 243, 454, 466, 529 |
| TfiI | GAWTC | 5 cut(s) | 400, 414, 659, 716, 1064 |
| Tru1I | TTAA | 2 cut(s) | 426, 1395 |
| Tru9I | TTAA | 2 cut(s) | 426, 1395 |
| TscAI | CASTG | 1 cut(s) | 728 |
| TseI | GCWGC | 3 cut(s) | 1375, 1430, 1445 |
| TspRI | CASTG | 1 cut(s) | 728 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 589 |
| VspI | ATTAAT | 1 cut(s) | 1395 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 180 |
| XapI | RAATTY | 8 cut(s) | 239, 260, 462, 525, 636, 744, 803, 1253 |
| XbaI | TCTAGA | 1 cut(s) | 1258 |
| XceI | RCATGY | 1 cut(s) | 365 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1278 |
| XmiI | GTMKAC | 1 cut(s) | 668 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1044 |
| XspI | CTAG | 1 cut(s) | 1259 |
| Zsp2I | ATGCAT | 2 cut(s) | 613, 697 |