isoform X1
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| F420_oxidored | PF03807 | 3 - 91 | 5.5e-09 | NADP oxidoreductase coenzyme F420-dependent |
| 2-Hacid_dh_C | PF02826 | 3 - 90 | 5.1e-07 | D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain |
| TYRAAT1_C | PF26213 | 189 - 262 | 9.9e-33 | TYRAAT1-like, C-terminal domain |
| F420_oxidored | PF03807 | 322 - 411 | 6.4e-08 | NADP oxidoreductase coenzyme F420-dependent |
| PDH_N | PF02153 | 336 - 444 | 9.9e-08 | Prephenate dehydrogenase, nucleotide-binding domain |
| TYRAAT1_C | PF26213 | 508 - 581 | 6.2e-31 | TYRAAT1-like, C-terminal domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 521 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1325 |
| AccI | GTMKAC | 1 cut(s) | 1547 |
| AciI | CCGC | 1 cut(s) | 149 |
| AcsI | RAATTY | 3 cut(s) | 1244, 1282, 1585 |
| AcuI | CTGAAG | 1 cut(s) | 26 |
| AdeI | CACNNNGTG | 1 cut(s) | 1406 |
| AfaI | GTAC | 5 cut(s) | 404, 686, 830, 1150, 1300 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 356, 1313, 1325 |
| AflII | CTTAAG | 1 cut(s) | 245 |
| AflIII | ACRYGT | 1 cut(s) | 465 |
| AgsI | TTSAA | 9 cut(s) | 294, 742, 879, 1164, 1268, 1282, 1436, 1454, 1585 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 338, 370 |
| AluBI | AGCT | 9 cut(s) | 324, 504, 647, 728, 751, 860, 1534, 1666, 1795 |
| AluI | AGCT | 9 cut(s) | 324, 504, 647, 728, 751, 860, 1534, 1666, 1795 |
| Alw26I | GTCTC | 1 cut(s) | 611 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1711 |
| AoxI | GGCC | 2 cut(s) | 70, 114 |
| ApeKI | GCWGC | 3 cut(s) | 860, 1484, 1792 |
| ApoI | RAATTY | 3 cut(s) | 1244, 1282, 1585 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 245, 277, 713, 745 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 411 |
| AspA2I | CCTAGG | 1 cut(s) | 67 |
| AspLEI | GCGC | 1 cut(s) | 243 |
| AspS9I | GGNCC | 5 cut(s) | 79, 115, 154, 1316, 1660 |
| AsuII | TTCGAA | 1 cut(s) | 415 |
| AvaII | GGWCC | 4 cut(s) | 79, 154, 1316, 1660 |
| AvrII | CCTAGG | 1 cut(s) | 67 |
| BbvI | GCAGC | 2 cut(s) | 847, 1496 |
| BccI | CCATC | 2 cut(s) | 23, 853 |
| BceAI | ACGGC | 1 cut(s) | 129 |
| BcoDI | GTCTC | 1 cut(s) | 611 |
| BfaI | CTAG | 5 cut(s) | 68, 93, 321, 648, 1040 |
| BfrI | CTTAAG | 1 cut(s) | 245 |
| BfuAI | ACCTGC | 1 cut(s) | 521 |
| BglII | AGATCT | 1 cut(s) | 224 |
| BisI | GCNGC | 3 cut(s) | 861, 1485, 1793 |
| BlnI | CCTAGG | 1 cut(s) | 67 |
| BlsI | GCNGC | 3 cut(s) | 862, 1486, 1794 |
| Bme18I | GGWCC | 4 cut(s) | 79, 154, 1316, 1660 |
| BmgT120I | GGNCC | 5 cut(s) | 79, 115, 154, 1316, 1660 |
| BmsI | GCATC | 2 cut(s) | 1135, 1312 |
| Bpu10I | CCTNAGC | 1 cut(s) | 906 |
| Bpu14I | TTCGAA | 1 cut(s) | 415 |
| BpuEI | CTTGAG | 3 cut(s) | 293, 940, 947 |
| BsaBI | GATNNNNATC | 1 cut(s) | 14 |
| BsaJI | CCNNGG | 3 cut(s) | 67, 124, 864 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 356, 1313, 1325 |
| Bse1I | ACTGG | 1 cut(s) | 1190 |
| Bse3DI | GCAATG | 1 cut(s) | 1662 |
| Bse8I | GATNNNNATC | 1 cut(s) | 14 |
| BseDI | CCNNGG | 3 cut(s) | 67, 124, 864 |
| BseGI | GGATG | 5 cut(s) | 579, 845, 1126, 1303, 1780 |
| BseJI | GATNNNNATC | 1 cut(s) | 14 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 356, 1313, 1325 |
| BseMI | GCAATG | 1 cut(s) | 1662 |
| BseMII | CTCAG | 6 cut(s) | 235, 501, 920, 1158, 1192, 1740 |
| BseNI | ACTGG | 1 cut(s) | 1190 |
| BseRI | GAGGAG | 2 cut(s) | 839, 1715 |
| BseXI | GCAGC | 2 cut(s) | 847, 1496 |
| BseYI | CCCAGC | 1 cut(s) | 1534 |
| BsgI | GTGCAG | 1 cut(s) | 1485 |
| BshFI | GGCC | 2 cut(s) | 72, 116 |
| BslFI | GGGAC | 1 cut(s) | 51 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 356, 1313, 1325 |
| BsmAI | GTCTC | 1 cut(s) | 611 |
| BsmFI | GGGAC | 1 cut(s) | 51 |
| BsmI | GAATGC | 2 cut(s) | 1759, 1794 |
| BsnI | GGCC | 2 cut(s) | 72, 116 |
| Bsp119I | TTCGAA | 1 cut(s) | 415 |
| Bsp1407I | TGTACA | 1 cut(s) | 684 |
| Bsp143I | GATC | 3 cut(s) | 224, 1052, 1618 |
| BspACI | CCGC | 1 cut(s) | 149 |
| BspANI | GGCC | 2 cut(s) | 72, 116 |
| BspCNI | CTCAG | 6 cut(s) | 234, 502, 919, 1159, 1191, 1741 |
| BspMI | ACCTGC | 1 cut(s) | 521 |
| BspQI | GCTCTTC | 1 cut(s) | 1353 |
| BspT104I | TTCGAA | 1 cut(s) | 415 |
| BspTI | CTTAAG | 1 cut(s) | 245 |
| BsrDI | GCAATG | 1 cut(s) | 1662 |
| BsrGI | TGTACA | 1 cut(s) | 684 |
| BsrI | ACTGG | 1 cut(s) | 1190 |
| BssECI | CCNNGG | 3 cut(s) | 67, 124, 864 |
| BssMI | GATC | 3 cut(s) | 224, 1052, 1618 |
| BssT1I | CCWWGG | 1 cut(s) | 67 |
| Bst4CI | ACNGT | 3 cut(s) | 556, 920, 1603 |
| Bst6I | CTCTTC | 2 cut(s) | 240, 1353 |
| BstAFI | CTTAAG | 1 cut(s) | 245 |
| BstAUI | TGTACA | 1 cut(s) | 684 |
| BstBI | TTCGAA | 1 cut(s) | 415 |
| BstC8I | GCNNGC | 2 cut(s) | 1482, 1759 |
| BstDEI | CTNAG | 7 cut(s) | 221, 510, 724, 906, 1167, 1178, 1749 |
| BstF5I | GGATG | 5 cut(s) | 579, 845, 1126, 1303, 1780 |
| BstHHI | GCGC | 1 cut(s) | 243 |
| BstKTI | GATC | 3 cut(s) | 227, 1055, 1621 |
| BstMAI | GTCTC | 1 cut(s) | 611 |
| BstMBI | GATC | 3 cut(s) | 224, 1052, 1618 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 247, 1477 |
| BstNSI | RCATGY | 3 cut(s) | 394, 469, 1484 |
| BstV1I | GCAGC | 2 cut(s) | 847, 1496 |
| BstX2I | RGATCY | 1 cut(s) | 224 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 557 |
| BstYI | RGATCY | 1 cut(s) | 224 |
| BsuRI | GGCC | 2 cut(s) | 72, 116 |
| BtsCI | GGATG | 5 cut(s) | 579, 845, 1126, 1303, 1780 |
| BveI | ACCTGC | 1 cut(s) | 521 |
| Cac8I | GCNNGC | 2 cut(s) | 1482, 1759 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1711 |
| CfoI | GCGC | 1 cut(s) | 243 |
| Cfr13I | GGNCC | 5 cut(s) | 79, 115, 154, 1316, 1660 |
| Csp6I | GTAC | 5 cut(s) | 403, 685, 829, 1149, 1299 |
| CviQI | GTAC | 5 cut(s) | 403, 685, 829, 1149, 1299 |
| DdeI | CTNAG | 7 cut(s) | 221, 510, 724, 906, 1167, 1178, 1749 |
| DpnI | GATC | 3 cut(s) | 226, 1054, 1620 |
| DpnII | GATC | 3 cut(s) | 224, 1052, 1618 |
| DraIII | CACNNNGTG | 1 cut(s) | 1406 |
| Eam1104I | CTCTTC | 2 cut(s) | 240, 1353 |
| EarI | CTCTTC | 2 cut(s) | 240, 1353 |
| Eco130I | CCWWGG | 1 cut(s) | 67 |
| Eco32I | GATATC | 2 cut(s) | 933, 1423 |
| Eco47I | GGWCC | 4 cut(s) | 79, 154, 1316, 1660 |
| Eco57I | CTGAAG | 1 cut(s) | 26 |
| EcoO109I | RGGNCCY | 1 cut(s) | 154 |
| EcoRV | GATATC | 2 cut(s) | 933, 1423 |
| EcoT14I | CCWWGG | 1 cut(s) | 67 |
| EcoT22I | ATGCAT | 1 cut(s) | 700 |
| ErhI | CCWWGG | 1 cut(s) | 67 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1125, 1157 |
| FaqI | GGGAC | 1 cut(s) | 51 |
| FauI | CCCGC | 1 cut(s) | 156 |
| FblI | GTMKAC | 1 cut(s) | 1547 |
| Fnu4HI | GCNGC | 3 cut(s) | 861, 1485, 1793 |
| FokI | GGATG | 5 cut(s) | 586, 832, 1113, 1290, 1767 |
| Fsp4HI | GCNGC | 3 cut(s) | 861, 1485, 1793 |
| FspBI | CTAG | 5 cut(s) | 68, 93, 321, 648, 1040 |
| GlaI | GCGC | 1 cut(s) | 242 |
| GluI | GCNGC | 3 cut(s) | 861, 1485, 1793 |
| GsaI | CCCAGC | 1 cut(s) | 1538 |
| HaeIII | GGCC | 2 cut(s) | 72, 116 |
| HhaI | GCGC | 1 cut(s) | 243 |
| Hin6I | GCGC | 1 cut(s) | 241 |
| HinP1I | GCGC | 1 cut(s) | 241 |
| HincII | GTYRAC | 3 cut(s) | 268, 579, 1548 |
| HindII | GTYRAC | 3 cut(s) | 268, 579, 1548 |
| Hpy166II | GTNNAC | 6 cut(s) | 164, 268, 403, 579, 637, 1548 |
| Hpy188III | TCNNGA | 6 cut(s) | 93, 964, 1050, 1130, 1418, 1433 |
| Hpy8I | GTNNAC | 6 cut(s) | 164, 268, 403, 579, 637, 1548 |
| HpyAV | CCTTC | 4 cut(s) | 473, 799, 1430, 1512 |
| HpyCH4III | ACNGT | 3 cut(s) | 556, 920, 1603 |
| HpyCH4IV | ACGT | 1 cut(s) | 1021 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 247, 1477 |
| HpyF3I | CTNAG | 7 cut(s) | 221, 510, 724, 906, 1167, 1178, 1749 |
| HpySE526I | ACGT | 1 cut(s) | 1021 |
| HspAI | GCGC | 1 cut(s) | 241 |
| Kzo9I | GATC | 3 cut(s) | 224, 1052, 1618 |
| LguI | GCTCTTC | 1 cut(s) | 1353 |
| LmnI | GCTCC | 3 cut(s) | 857, 1702, 1800 |
| Lsp1109I | GCAGC | 2 cut(s) | 847, 1496 |
| LweI | GCATC | 2 cut(s) | 1135, 1312 |
| MaeI | CTAG | 5 cut(s) | 68, 93, 321, 648, 1040 |
| MaeII | ACGT | 1 cut(s) | 1021 |
| MaeIII | GTNAC | 6 cut(s) | 98, 303, 1382, 1406, 1491, 1568 |
| MalI | GATC | 3 cut(s) | 226, 1054, 1620 |
| MboI | GATC | 3 cut(s) | 224, 1052, 1618 |
| MboII | GAAGA | 7 cut(s) | 19, 227, 754, 864, 867, 1256, 1340 |
| MfeI | CAATTG | 1 cut(s) | 972 |
| MflI | RGATCY | 1 cut(s) | 224 |
| MluCI | AATT | 7 cut(s) | 417, 972, 1089, 1244, 1282, 1496, 1585 |
| MlyI | GAGTC | 3 cut(s) | 573, 586, 1553 |
| MmeI | TCCRAC | 2 cut(s) | 606, 699 |
| Mph1103I | ATGCAT | 1 cut(s) | 700 |
| MroXI | GAANNNNTTC | 1 cut(s) | 411 |
| MseI | TTAA | 3 cut(s) | 246, 461, 1239 |
| MslI | CAYNNNNRTG | 1 cut(s) | 945 |
| MspA1I | CMGCKG | 1 cut(s) | 751 |
| MspCI | CTTAAG | 1 cut(s) | 245 |
| MunI | CAATTG | 1 cut(s) | 972 |
| Mva1269I | GAATGC | 2 cut(s) | 1759, 1794 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 247, 1477 |
| NdeII | GATC | 3 cut(s) | 224, 1052, 1618 |
| NmeAIII | GCCGAG | 1 cut(s) | 105 |
| NmuCI | GTSAC | 4 cut(s) | 98, 1382, 1406, 1491 |
| NsiI | ATGCAT | 1 cut(s) | 700 |
| NspI | RCATGY | 3 cut(s) | 394, 469, 1484 |
| NspV | TTCGAA | 1 cut(s) | 415 |
| PaeI | GCATGC | 1 cut(s) | 1484 |
| PciI | ACATGT | 1 cut(s) | 465 |
| PciSI | GCTCTTC | 1 cut(s) | 1353 |
| PctI | GAATGC | 2 cut(s) | 1759, 1794 |
| PdmI | GAANNNNTTC | 1 cut(s) | 411 |
| PfeI | GAWTC | 7 cut(s) | 169, 212, 274, 587, 869, 1388, 1691 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1325 |
| PkrI | GCNGC | 3 cut(s) | 862, 1486, 1794 |
| PleI | GAGTC | 3 cut(s) | 572, 586, 1552 |
| PpsI | GAGTC | 3 cut(s) | 572, 586, 1552 |
| PpuMI | RGGWCCY | 1 cut(s) | 154 |
| PscI | ACATGT | 1 cut(s) | 465 |
| Psp5II | RGGWCCY | 1 cut(s) | 154 |
| PspFI | CCCAGC | 1 cut(s) | 1534 |
| PspPI | GGNCC | 5 cut(s) | 79, 115, 154, 1316, 1660 |
| PspPPI | RGGWCCY | 1 cut(s) | 154 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1711 |
| PsuI | RGATCY | 1 cut(s) | 224 |
| PvuII | CAGCTG | 1 cut(s) | 751 |
| RsaI | GTAC | 5 cut(s) | 404, 686, 830, 1150, 1300 |
| RsaNI | GTAC | 5 cut(s) | 403, 685, 829, 1149, 1299 |
| RseI | CAYNNNNRTG | 1 cut(s) | 945 |
| SalI | GTCGAC | 1 cut(s) | 1546 |
| SapI | GCTCTTC | 1 cut(s) | 1353 |
| SaqAI | TTAA | 3 cut(s) | 246, 461, 1239 |
| SatI | GCNGC | 3 cut(s) | 861, 1485, 1793 |
| Sau3AI | GATC | 3 cut(s) | 224, 1052, 1618 |
| Sau96I | GGNCC | 5 cut(s) | 79, 115, 154, 1316, 1660 |
| SchI | GAGTC | 3 cut(s) | 573, 586, 1553 |
| SfaNI | GCATC | 2 cut(s) | 1135, 1312 |
| SfuI | TTCGAA | 1 cut(s) | 415 |
| SinI | GGWCC | 4 cut(s) | 79, 154, 1316, 1660 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 945 |
| SmlI | CTYRAG | 4 cut(s) | 245, 308, 955, 962 |
| SmoI | CTYRAG | 4 cut(s) | 245, 308, 955, 962 |
| SphI | GCATGC | 1 cut(s) | 1484 |
| Sse9I | AATT | 7 cut(s) | 417, 972, 1089, 1244, 1282, 1496, 1585 |
| SsiI | CCGC | 1 cut(s) | 149 |
| SspMI | CTAG | 5 cut(s) | 68, 93, 321, 648, 1040 |
| StyI | CCWWGG | 1 cut(s) | 67 |
| TaaI | ACNGT | 3 cut(s) | 556, 920, 1603 |
| TaiI | ACGT | 1 cut(s) | 1024 |
| TaqI | TCGA | 6 cut(s) | 415, 590, 1051, 1107, 1444, 1547 |
| TaqII | GACCGA | 1 cut(s) | 1425 |
| TasI | AATT | 7 cut(s) | 417, 972, 1089, 1244, 1282, 1496, 1585 |
| TatI | WGTACW | 2 cut(s) | 684, 828 |
| TfiI | GAWTC | 7 cut(s) | 169, 212, 274, 587, 869, 1388, 1691 |
| Tru1I | TTAA | 3 cut(s) | 246, 461, 1239 |
| Tru9I | TTAA | 3 cut(s) | 246, 461, 1239 |
| TseFI | GTSAC | 4 cut(s) | 98, 1382, 1406, 1491 |
| TseI | GCWGC | 3 cut(s) | 860, 1484, 1792 |
| Tsp45I | GTSAC | 4 cut(s) | 98, 1382, 1406, 1491 |
| TspDTI | ATGAA | 4 cut(s) | 123, 670, 1627, 1683 |
| TspGWI | ACGGA | 2 cut(s) | 205, 444 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1325 |
| Vha464I | CTTAAG | 1 cut(s) | 245 |
| VpaK11BI | GGWCC | 4 cut(s) | 79, 154, 1316, 1660 |
| XapI | RAATTY | 3 cut(s) | 1244, 1282, 1585 |
| XbaI | TCTAGA | 1 cut(s) | 92 |
| XceI | RCATGY | 3 cut(s) | 394, 469, 1484 |
| XmaJI | CCTAGG | 1 cut(s) | 67 |
| XmiI | GTMKAC | 1 cut(s) | 1547 |
| XmnI | GAANNNNTTC | 1 cut(s) | 411 |
| XspI | CTAG | 5 cut(s) | 68, 93, 321, 648, 1040 |
| Zsp2I | ATGCAT | 1 cut(s) | 700 |