isoform X1
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 2 cut(s) | 156, 273 |
| AcsI | RAATTY | 1 cut(s) | 122 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 57 |
| AflII | CTTAAG | 1 cut(s) | 143 |
| AgsI | TTSAA | 2 cut(s) | 211, 349 |
| AluBI | AGCT | 1 cut(s) | 131 |
| AluI | AGCT | 1 cut(s) | 131 |
| AlwI | GGATC | 2 cut(s) | 156, 273 |
| Ama87I | CYCGRG | 1 cut(s) | 55 |
| ApoI | RAATTY | 1 cut(s) | 122 |
| AsuHPI | GGTGA | 3 cut(s) | 22, 317, 329 |
| AvaI | CYCGRG | 1 cut(s) | 55 |
| BccI | CCATC | 1 cut(s) | 97 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 230, 264 |
| BfrI | CTTAAG | 1 cut(s) | 143 |
| BmeT110I | CYCGRG | 1 cut(s) | 55 |
| BpmI | CTGGAG | 1 cut(s) | 281 |
| BpuEI | CTTGAG | 1 cut(s) | 244 |
| BsaJI | CCNNGG | 2 cut(s) | 56, 273 |
| BsaWI | WCCGGW | 1 cut(s) | 193 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 220, 250, 269, 299 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 57 |
| Bse1I | ACTGG | 1 cut(s) | 287 |
| BseDI | CCNNGG | 2 cut(s) | 56, 273 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 57 |
| BseMII | CTCAG | 1 cut(s) | 330 |
| BseNI | ACTGG | 1 cut(s) | 287 |
| BseRI | GAGGAG | 2 cut(s) | 19, 241 |
| BsiHKCI | CYCGRG | 1 cut(s) | 55 |
| BsiSI | CCGG | 1 cut(s) | 194 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 57 |
| BsoBI | CYCGRG | 1 cut(s) | 55 |
| Bsp143I | GATC | 3 cut(s) | 25, 148, 265 |
| BspCNI | CTCAG | 1 cut(s) | 331 |
| BspPI | GGATC | 2 cut(s) | 156, 273 |
| BspTI | CTTAAG | 1 cut(s) | 143 |
| BsrI | ACTGG | 1 cut(s) | 287 |
| BssECI | CCNNGG | 2 cut(s) | 56, 273 |
| BssMI | GATC | 3 cut(s) | 25, 148, 265 |
| BssT1I | CCWWGG | 1 cut(s) | 273 |
| Bst4CI | ACNGT | 1 cut(s) | 305 |
| BstAFI | CTTAAG | 1 cut(s) | 143 |
| BstDEI | CTNAG | 1 cut(s) | 339 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 55 |
| BstKTI | GATC | 3 cut(s) | 28, 151, 268 |
| BstMBI | GATC | 3 cut(s) | 25, 148, 265 |
| BstX2I | RGATCY | 1 cut(s) | 265 |
| BstYI | RGATCY | 1 cut(s) | 265 |
| CviAII | CATG | 3 cut(s) | 32, 80, 214 |
| CviJI | RGCY | 5 cut(s) | 40, 107, 131, 293, 338 |
| CviKI_1 | RGCY | 5 cut(s) | 40, 107, 131, 293, 338 |
| DdeI | CTNAG | 1 cut(s) | 339 |
| DpnI | GATC | 3 cut(s) | 27, 150, 267 |
| DpnII | GATC | 3 cut(s) | 25, 148, 265 |
| Eco130I | CCWWGG | 1 cut(s) | 273 |
| Eco88I | CYCGRG | 1 cut(s) | 55 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 55 |
| EcoT14I | CCWWGG | 1 cut(s) | 273 |
| ErhI | CCWWGG | 1 cut(s) | 273 |
| FaeI | CATG | 3 cut(s) | 35, 83, 217 |
| FaiI | YATR | 7 cut(s) | 33, 81, 170, 204, 215, 245, 290 |
| FatI | CATG | 3 cut(s) | 31, 79, 213 |
| GsuI | CTGGAG | 1 cut(s) | 281 |
| HapII | CCGG | 1 cut(s) | 194 |
| Hin1II | CATG | 3 cut(s) | 35, 83, 217 |
| HinfI | GANTC | 2 cut(s) | 154, 341 |
| HpaII | CCGG | 1 cut(s) | 194 |
| HphI | GGTGA | 3 cut(s) | 22, 317, 329 |
| Hpy188I | TCNGA | 4 cut(s) | 25, 102, 118, 153 |
| Hpy188III | TCNNGA | 3 cut(s) | 55, 223, 260 |
| HpyAV | CCTTC | 2 cut(s) | 61, 227 |
| HpyCH4III | ACNGT | 1 cut(s) | 305 |
| HpyF3I | CTNAG | 1 cut(s) | 339 |
| Hsp92II | CATG | 3 cut(s) | 35, 83, 217 |
| Kzo9I | GATC | 3 cut(s) | 25, 148, 265 |
| LpnPI | CCDG | 5 cut(s) | 117, 141, 207, 245, 268 |
| MaeIII | GTNAC | 1 cut(s) | 10 |
| MalI | GATC | 3 cut(s) | 27, 150, 267 |
| MboI | GATC | 3 cut(s) | 25, 148, 265 |
| MboII | GAAGA | 1 cut(s) | 260 |
| MflI | RGATCY | 1 cut(s) | 265 |
| MluCI | AATT | 3 cut(s) | 122, 254, 352 |
| MlyI | GAGTC | 1 cut(s) | 350 |
| MnlI | CCTC | 3 cut(s) | 51, 219, 256 |
| MseI | TTAA | 2 cut(s) | 144, 300 |
| MspA1I | CMGCKG | 1 cut(s) | 131 |
| MspCI | CTTAAG | 1 cut(s) | 143 |
| MspI | CCGG | 1 cut(s) | 194 |
| NdeII | GATC | 3 cut(s) | 25, 148, 265 |
| NlaIII | CATG | 3 cut(s) | 35, 83, 217 |
| NmuCI | GTSAC | 1 cut(s) | 10 |
| PfeI | GAWTC | 1 cut(s) | 154 |
| PleI | GAGTC | 1 cut(s) | 349 |
| PpsI | GAGTC | 1 cut(s) | 349 |
| PsuI | RGATCY | 1 cut(s) | 265 |
| PvuII | CAGCTG | 1 cut(s) | 131 |
| SaqAI | TTAA | 2 cut(s) | 144, 300 |
| Sau3AI | GATC | 3 cut(s) | 25, 148, 265 |
| SchI | GAGTC | 1 cut(s) | 350 |
| SetI | ASST | 4 cut(s) | 114, 133, 144, 238 |
| SmlI | CTYRAG | 2 cut(s) | 143, 223 |
| SmoI | CTYRAG | 2 cut(s) | 143, 223 |
| Sse9I | AATT | 3 cut(s) | 122, 254, 352 |
| StyI | CCWWGG | 1 cut(s) | 273 |
| TaaI | ACNGT | 1 cut(s) | 305 |
| TasI | AATT | 3 cut(s) | 122, 254, 352 |
| TfiI | GAWTC | 1 cut(s) | 154 |
| Tru1I | TTAA | 2 cut(s) | 144, 300 |
| Tru9I | TTAA | 2 cut(s) | 144, 300 |
| TseFI | GTSAC | 1 cut(s) | 10 |
| Tsp45I | GTSAC | 1 cut(s) | 10 |
| TspDTI | ATGAA | 1 cut(s) | 7 |
| Vha464I | CTTAAG | 1 cut(s) | 143 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 55 |
| XapI | RAATTY | 1 cut(s) | 122 |