isoform X1
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 620 |
| AccI | GTMKAC | 1 cut(s) | 63 |
| AciI | CCGC | 1 cut(s) | 573 |
| AcuI | CTGAAG | 2 cut(s) | 441, 545 |
| AgsI | TTSAA | 5 cut(s) | 175, 205, 344, 403, 535 |
| AjnI | CCWGG | 1 cut(s) | 508 |
| AluBI | AGCT | 4 cut(s) | 17, 194, 347, 562 |
| AluI | AGCT | 4 cut(s) | 17, 194, 347, 562 |
| Alw26I | GTCTC | 2 cut(s) | 114, 586 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 464 |
| AoxI | GGCC | 2 cut(s) | 503, 515 |
| ApeKI | GCWGC | 3 cut(s) | 321, 335, 347 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 277, 530 |
| AspS9I | GGNCC | 2 cut(s) | 138, 265 |
| AsuHPI | GGTGA | 2 cut(s) | 106, 122 |
| AvaII | GGWCC | 2 cut(s) | 138, 265 |
| BauI | CACGAG | 1 cut(s) | 286 |
| BbsI | GAAGAC | 1 cut(s) | 614 |
| BbvI | GCAGC | 3 cut(s) | 308, 322, 334 |
| BccI | CCATC | 1 cut(s) | 100 |
| BciT130I | CCWGG | 1 cut(s) | 510 |
| BclI | TGATCA | 1 cut(s) | 76 |
| BcoDI | GTCTC | 2 cut(s) | 114, 586 |
| BfaI | CTAG | 2 cut(s) | 468, 540 |
| BfuAI | ACCTGC | 1 cut(s) | 620 |
| BisI | GCNGC | 3 cut(s) | 322, 336, 348 |
| BlsI | GCNGC | 3 cut(s) | 323, 337, 349 |
| Bme1390I | CCNGG | 1 cut(s) | 510 |
| Bme18I | GGWCC | 2 cut(s) | 138, 265 |
| BmgT120I | GGNCC | 2 cut(s) | 138, 265 |
| BmrFI | CCNGG | 1 cut(s) | 510 |
| BmsI | GCATC | 2 cut(s) | 45, 87 |
| BpiI | GAAGAC | 1 cut(s) | 614 |
| BsaJI | CCNNGG | 3 cut(s) | 268, 325, 509 |
| Bse1I | ACTGG | 1 cut(s) | 59 |
| BseBI | CCWGG | 1 cut(s) | 510 |
| BseDI | CCNNGG | 3 cut(s) | 268, 325, 509 |
| BseGI | GGATG | 1 cut(s) | 364 |
| BseNI | ACTGG | 1 cut(s) | 59 |
| BseRI | GAGGAG | 2 cut(s) | 130, 558 |
| BseXI | GCAGC | 3 cut(s) | 308, 322, 334 |
| BsgI | GTGCAG | 1 cut(s) | 598 |
| Bsh1285I | CGRYCG | 1 cut(s) | 577 |
| BshFI | GGCC | 2 cut(s) | 505, 517 |
| BsiEI | CGRYCG | 1 cut(s) | 577 |
| BsmAI | GTCTC | 2 cut(s) | 114, 586 |
| BsmBI | CGTCTC | 1 cut(s) | 114 |
| BsnI | GGCC | 2 cut(s) | 505, 517 |
| Bsp143I | GATC | 2 cut(s) | 76, 242 |
| Bsp19I | CCATGG | 1 cut(s) | 325 |
| BspACI | CCGC | 1 cut(s) | 573 |
| BspANI | GGCC | 2 cut(s) | 505, 517 |
| BspMI | ACCTGC | 1 cut(s) | 620 |
| BsrI | ACTGG | 1 cut(s) | 59 |
| BssECI | CCNNGG | 3 cut(s) | 268, 325, 509 |
| BssMI | GATC | 2 cut(s) | 76, 242 |
| BssNAI | GTATAC | 1 cut(s) | 64 |
| BssSI | CACGAG | 1 cut(s) | 286 |
| BssT1I | CCWWGG | 2 cut(s) | 268, 325 |
| Bst1107I | GTATAC | 1 cut(s) | 64 |
| Bst2BI | CACGAG | 1 cut(s) | 286 |
| Bst2UI | CCWGG | 1 cut(s) | 510 |
| Bst6I | CTCTTC | 1 cut(s) | 521 |
| BstDSI | CCRYGG | 1 cut(s) | 325 |
| BstF5I | GGATG | 1 cut(s) | 364 |
| BstKTI | GATC | 2 cut(s) | 79, 245 |
| BstMAI | GTCTC | 2 cut(s) | 114, 586 |
| BstMBI | GATC | 2 cut(s) | 76, 242 |
| BstMCI | CGRYCG | 1 cut(s) | 577 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 55, 318, 344 |
| BstNI | CCWGG | 1 cut(s) | 510 |
| BstSCI | CCNGG | 1 cut(s) | 508 |
| BstV1I | GCAGC | 3 cut(s) | 308, 322, 334 |
| BstV2I | GAAGAC | 1 cut(s) | 614 |
| BstZ17I | GTATAC | 1 cut(s) | 64 |
| BsuRI | GGCC | 2 cut(s) | 505, 517 |
| BtgI | CCRYGG | 1 cut(s) | 325 |
| BtsCI | GGATG | 1 cut(s) | 364 |
| BtsIMutI | CAGTG | 1 cut(s) | 615 |
| BveI | ACCTGC | 1 cut(s) | 620 |
| CaiI | CAGNNNCTG | 1 cut(s) | 464 |
| Cfr13I | GGNCC | 2 cut(s) | 138, 265 |
| CviAII | CATG | 3 cut(s) | 282, 326, 389 |
| CviJI | RGCY | 8 cut(s) | 5, 17, 194, 347, 452, 505, 517, 562 |
| CviKI_1 | RGCY | 8 cut(s) | 5, 17, 194, 347, 452, 505, 517, 562 |
| DpnI | GATC | 2 cut(s) | 78, 244 |
| DpnII | GATC | 2 cut(s) | 76, 242 |
| Eam1104I | CTCTTC | 1 cut(s) | 521 |
| EarI | CTCTTC | 1 cut(s) | 521 |
| Eco130I | CCWWGG | 2 cut(s) | 268, 325 |
| Eco147I | AGGCCT | 2 cut(s) | 505, 517 |
| Eco47I | GGWCC | 2 cut(s) | 138, 265 |
| Eco57I | CTGAAG | 2 cut(s) | 441, 545 |
| EcoRII | CCWGG | 1 cut(s) | 508 |
| EcoT14I | CCWWGG | 2 cut(s) | 268, 325 |
| ErhI | CCWWGG | 2 cut(s) | 268, 325 |
| Esp3I | CGTCTC | 1 cut(s) | 114 |
| FaeI | CATG | 3 cut(s) | 285, 329, 392 |
| FatI | CATG | 3 cut(s) | 281, 325, 388 |
| FbaI | TGATCA | 1 cut(s) | 76 |
| FblI | GTMKAC | 1 cut(s) | 63 |
| Fnu4HI | GCNGC | 3 cut(s) | 322, 336, 348 |
| FokI | GGATG | 1 cut(s) | 371 |
| Fsp4HI | GCNGC | 3 cut(s) | 322, 336, 348 |
| FspBI | CTAG | 2 cut(s) | 468, 540 |
| GluI | GCNGC | 3 cut(s) | 322, 336, 348 |
| HaeIII | GGCC | 2 cut(s) | 505, 517 |
| Hin1II | CATG | 3 cut(s) | 285, 329, 392 |
| HindIII | AAGCTT | 1 cut(s) | 192 |
| HinfI | GANTC | 3 cut(s) | 20, 82, 461 |
| HphI | GGTGA | 2 cut(s) | 106, 122 |
| Hpy166II | GTNNAC | 2 cut(s) | 64, 265 |
| Hpy188I | TCNGA | 3 cut(s) | 81, 87, 460 |
| Hpy188III | TCNNGA | 2 cut(s) | 403, 540 |
| Hpy8I | GTNNAC | 2 cut(s) | 64, 265 |
| HpyAV | CCTTC | 1 cut(s) | 173 |
| HpyCH4V | TGCA | 5 cut(s) | 100, 211, 338, 497, 615 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 55, 318, 344 |
| Hsp92II | CATG | 3 cut(s) | 285, 329, 392 |
| Ksp22I | TGATCA | 1 cut(s) | 76 |
| Kzo9I | GATC | 2 cut(s) | 76, 242 |
| LpnPI | CCDG | 5 cut(s) | 72, 168, 495, 522, 625 |
| Lsp1109I | GCAGC | 3 cut(s) | 308, 322, 334 |
| LweI | GCATC | 2 cut(s) | 45, 87 |
| MaeI | CTAG | 2 cut(s) | 468, 540 |
| MalI | GATC | 2 cut(s) | 78, 244 |
| MboI | GATC | 2 cut(s) | 76, 242 |
| MboII | GAAGA | 3 cut(s) | 447, 538, 619 |
| MluCI | AATT | 3 cut(s) | 339, 423, 432 |
| MlyI | GAGTC | 1 cut(s) | 76 |
| MnlI | CCTC | 9 cut(s) | 108, 118, 151, 495, 498, 507, 516, 522, 536 |
| MroXI | GAANNNNTTC | 2 cut(s) | 277, 530 |
| MseI | TTAA | 4 cut(s) | 27, 90, 306, 353 |
| MslI | CAYNNNNRTG | 2 cut(s) | 286, 387 |
| MspR9I | CCNGG | 1 cut(s) | 510 |
| MvaI | CCWGG | 1 cut(s) | 510 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 55, 318, 344 |
| NcoI | CCATGG | 1 cut(s) | 325 |
| NdeII | GATC | 2 cut(s) | 76, 242 |
| NlaIII | CATG | 3 cut(s) | 285, 329, 392 |
| PceI | AGGCCT | 2 cut(s) | 505, 517 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 574 |
| PdmI | GAANNNNTTC | 2 cut(s) | 277, 530 |
| PfeI | GAWTC | 2 cut(s) | 20, 461 |
| PkrI | GCNGC | 3 cut(s) | 323, 337, 349 |
| PleI | GAGTC | 1 cut(s) | 76 |
| PpsI | GAGTC | 1 cut(s) | 76 |
| Psp6I | CCWGG | 1 cut(s) | 508 |
| PspGI | CCWGG | 1 cut(s) | 508 |
| PspPI | GGNCC | 2 cut(s) | 138, 265 |
| PstNI | CAGNNNCTG | 1 cut(s) | 464 |
| RseI | CAYNNNNRTG | 2 cut(s) | 286, 387 |
| SaqAI | TTAA | 4 cut(s) | 27, 90, 306, 353 |
| SatI | GCNGC | 3 cut(s) | 322, 336, 348 |
| Sau3AI | GATC | 2 cut(s) | 76, 242 |
| Sau96I | GGNCC | 2 cut(s) | 138, 265 |
| SchI | GAGTC | 1 cut(s) | 76 |
| ScrFI | CCNGG | 1 cut(s) | 510 |
| SfaNI | GCATC | 2 cut(s) | 45, 87 |
| SinI | GGWCC | 2 cut(s) | 138, 265 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 286, 387 |
| Sse9I | AATT | 3 cut(s) | 339, 423, 432 |
| SseBI | AGGCCT | 2 cut(s) | 505, 517 |
| SsiI | CCGC | 1 cut(s) | 573 |
| SspI | AATATT | 1 cut(s) | 229 |
| SspMI | CTAG | 2 cut(s) | 468, 540 |
| StuI | AGGCCT | 2 cut(s) | 505, 517 |
| StyD4I | CCNGG | 1 cut(s) | 508 |
| StyI | CCWWGG | 2 cut(s) | 268, 325 |
| TaqI | TCGA | 1 cut(s) | 577 |
| TasI | AATT | 3 cut(s) | 339, 423, 432 |
| TfiI | GAWTC | 2 cut(s) | 20, 461 |
| Tru1I | TTAA | 4 cut(s) | 27, 90, 306, 353 |
| Tru9I | TTAA | 4 cut(s) | 27, 90, 306, 353 |
| TscAI | CASTG | 1 cut(s) | 622 |
| TseI | GCWGC | 3 cut(s) | 321, 335, 347 |
| TspDTI | ATGAA | 4 cut(s) | 249, 270, 377, 469 |
| TspRI | CASTG | 1 cut(s) | 622 |
| VpaK11BI | GGWCC | 2 cut(s) | 138, 265 |
| XbaI | TCTAGA | 1 cut(s) | 539 |
| XmiI | GTMKAC | 1 cut(s) | 63 |
| XmnI | GAANNNNTTC | 2 cut(s) | 277, 530 |
| XspI | CTAG | 2 cut(s) | 468, 540 |