isoform X1
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 376 |
| AciI | CCGC | 2 cut(s) | 442, 495 |
| AclWI | GGATC | 1 cut(s) | 12 |
| AcoI | YGGCCR | 2 cut(s) | 332, 487 |
| AfaI | GTAC | 1 cut(s) | 287 |
| AgsI | TTSAA | 3 cut(s) | 79, 307, 448 |
| AjnI | CCWGG | 1 cut(s) | 127 |
| AluBI | AGCT | 4 cut(s) | 251, 315, 475, 525 |
| AluI | AGCT | 4 cut(s) | 251, 315, 475, 525 |
| AlwI | GGATC | 1 cut(s) | 12 |
| Ama87I | CYCGRG | 1 cut(s) | 410 |
| AoxI | GGCC | 5 cut(s) | 232, 332, 404, 416, 487 |
| ApeKI | GCWGC | 4 cut(s) | 239, 251, 525, 544 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 443 |
| AspA2I | CCTAGG | 2 cut(s) | 419, 431 |
| AspS9I | GGNCC | 1 cut(s) | 42 |
| AsuC2I | CCSGG | 2 cut(s) | 411, 412 |
| AsuHPI | GGTGA | 4 cut(s) | 26, 436, 448, 476 |
| AvaI | CYCGRG | 1 cut(s) | 410 |
| AvaII | GGWCC | 1 cut(s) | 42 |
| AvrII | CCTAGG | 2 cut(s) | 419, 431 |
| BaeGI | GKGCMC | 1 cut(s) | 509 |
| BbsI | GAAGAC | 1 cut(s) | 348 |
| BbvI | GCAGC | 3 cut(s) | 226, 238, 512 |
| BccI | CCATC | 1 cut(s) | 4 |
| BceAI | ACGGC | 2 cut(s) | 247, 474 |
| BciT130I | CCWGG | 1 cut(s) | 129 |
| BclI | TGATCA | 1 cut(s) | 178 |
| BcnI | CCSGG | 2 cut(s) | 411, 412 |
| BfaI | CTAG | 2 cut(s) | 420, 432 |
| BfmI | CTRYAG | 1 cut(s) | 316 |
| BfuAI | ACCTGC | 1 cut(s) | 376 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 495 |
| BisI | GCNGC | 5 cut(s) | 240, 252, 496, 526, 545 |
| BlnI | CCTAGG | 2 cut(s) | 419, 431 |
| BlsI | GCNGC | 5 cut(s) | 241, 253, 497, 527, 546 |
| BmcAI | AGTACT | 1 cut(s) | 287 |
| Bme1390I | CCNGG | 3 cut(s) | 129, 411, 412 |
| Bme18I | GGWCC | 1 cut(s) | 42 |
| BmeT110I | CYCGRG | 1 cut(s) | 410 |
| BmgT120I | GGNCC | 1 cut(s) | 42 |
| BmrFI | CCNGG | 3 cut(s) | 129, 411, 412 |
| BpiI | GAAGAC | 1 cut(s) | 348 |
| BpmI | CTGGAG | 1 cut(s) | 150 |
| BpuMI | CCSGG | 2 cut(s) | 411, 412 |
| BsaJI | CCNNGG | 4 cut(s) | 229, 410, 419, 431 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 59, 89 |
| BseBI | CCWGG | 1 cut(s) | 129 |
| BseDI | CCNNGG | 4 cut(s) | 229, 410, 419, 431 |
| BseGI | GGATG | 1 cut(s) | 31 |
| BseRI | GAGGAG | 1 cut(s) | 34 |
| BseSI | GKGCMC | 1 cut(s) | 509 |
| BseX3I | CGGCCG | 1 cut(s) | 332 |
| BseXI | GCAGC | 3 cut(s) | 226, 238, 512 |
| BsgI | GTGCAG | 1 cut(s) | 511 |
| Bsh1285I | CGRYCG | 1 cut(s) | 335 |
| BshFI | GGCC | 5 cut(s) | 234, 334, 406, 418, 489 |
| BsiEI | CGRYCG | 1 cut(s) | 335 |
| BsiHKCI | CYCGRG | 1 cut(s) | 410 |
| BsiSI | CCGG | 2 cut(s) | 331, 411 |
| BslFI | GGGAC | 1 cut(s) | 210 |
| BsmFI | GGGAC | 1 cut(s) | 210 |
| BsnI | GGCC | 5 cut(s) | 234, 334, 406, 418, 489 |
| BsoBI | CYCGRG | 1 cut(s) | 410 |
| Bsp1286I | GDGCHC | 1 cut(s) | 509 |
| Bsp143I | GATC | 3 cut(s) | 4, 178, 207 |
| BspACI | CCGC | 2 cut(s) | 442, 495 |
| BspANI | GGCC | 5 cut(s) | 234, 334, 406, 418, 489 |
| BspMI | ACCTGC | 1 cut(s) | 376 |
| BspPI | GGATC | 1 cut(s) | 12 |
| BspQI | GCTCTTC | 1 cut(s) | 305 |
| BssECI | CCNNGG | 4 cut(s) | 229, 410, 419, 431 |
| BssMI | GATC | 3 cut(s) | 4, 178, 207 |
| BssT1I | CCWWGG | 2 cut(s) | 419, 431 |
| Bst2UI | CCWGG | 1 cut(s) | 129 |
| Bst4CI | ACNGT | 2 cut(s) | 215, 320 |
| Bst6I | CTCTTC | 1 cut(s) | 305 |
| BstDSI | CCRYGG | 1 cut(s) | 229 |
| BstF5I | GGATG | 1 cut(s) | 31 |
| BstKTI | GATC | 3 cut(s) | 7, 181, 210 |
| BstMBI | GATC | 3 cut(s) | 4, 178, 207 |
| BstMCI | CGRYCG | 1 cut(s) | 335 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 248, 495, 504 |
| BstNI | CCWGG | 1 cut(s) | 129 |
| BstSCI | CCNGG | 3 cut(s) | 127, 409, 410 |
| BstSFI | CTRYAG | 1 cut(s) | 316 |
| BstSLI | GKGCMC | 1 cut(s) | 509 |
| BstV1I | GCAGC | 3 cut(s) | 226, 238, 512 |
| BstV2I | GAAGAC | 1 cut(s) | 348 |
| BstZI | CGGCCG | 1 cut(s) | 332 |
| BsuRI | GGCC | 5 cut(s) | 234, 334, 406, 418, 489 |
| BtgI | CCRYGG | 1 cut(s) | 229 |
| BtsCI | GGATG | 1 cut(s) | 31 |
| BtsIMutI | CAGTG | 1 cut(s) | 115 |
| BveI | ACCTGC | 1 cut(s) | 376 |
| Cfr13I | GGNCC | 1 cut(s) | 42 |
| Cfr9I | CCCGGG | 1 cut(s) | 410 |
| Csp6I | GTAC | 1 cut(s) | 286 |
| CviAII | CATG | 3 cut(s) | 186, 192, 541 |
| CviQI | GTAC | 1 cut(s) | 286 |
| DpnI | GATC | 3 cut(s) | 6, 180, 209 |
| DpnII | GATC | 3 cut(s) | 4, 178, 207 |
| EaeI | YGGCCR | 2 cut(s) | 332, 487 |
| EagI | CGGCCG | 1 cut(s) | 332 |
| Eam1104I | CTCTTC | 1 cut(s) | 305 |
| EarI | CTCTTC | 1 cut(s) | 305 |
| EclXI | CGGCCG | 1 cut(s) | 332 |
| Eco130I | CCWWGG | 2 cut(s) | 419, 431 |
| Eco147I | AGGCCT | 1 cut(s) | 418 |
| Eco47I | GGWCC | 1 cut(s) | 42 |
| Eco52I | CGGCCG | 1 cut(s) | 332 |
| Eco88I | CYCGRG | 1 cut(s) | 410 |
| EcoRII | CCWGG | 1 cut(s) | 127 |
| EcoT14I | CCWWGG | 2 cut(s) | 419, 431 |
| ErhI | CCWWGG | 2 cut(s) | 419, 431 |
| FaeI | CATG | 3 cut(s) | 189, 195, 544 |
| FaqI | GGGAC | 1 cut(s) | 210 |
| FatI | CATG | 3 cut(s) | 185, 191, 540 |
| FbaI | TGATCA | 1 cut(s) | 178 |
| Fnu4HI | GCNGC | 5 cut(s) | 240, 252, 496, 526, 545 |
| FokI | GGATG | 1 cut(s) | 38 |
| Fsp4HI | GCNGC | 5 cut(s) | 240, 252, 496, 526, 545 |
| FspBI | CTAG | 2 cut(s) | 420, 432 |
| GluI | GCNGC | 5 cut(s) | 240, 252, 496, 526, 545 |
| GsuI | CTGGAG | 1 cut(s) | 150 |
| HaeIII | GGCC | 5 cut(s) | 234, 334, 406, 418, 489 |
| HapII | CCGG | 2 cut(s) | 331, 411 |
| Hin1II | CATG | 3 cut(s) | 189, 195, 544 |
| HincII | GTYRAC | 1 cut(s) | 169 |
| HindII | GTYRAC | 1 cut(s) | 169 |
| HpaII | CCGG | 2 cut(s) | 331, 411 |
| HphI | GGTGA | 4 cut(s) | 26, 436, 448, 476 |
| Hpy166II | GTNNAC | 2 cut(s) | 136, 169 |
| Hpy188I | TCNGA | 4 cut(s) | 9, 178, 259, 364 |
| Hpy188III | TCNNGA | 1 cut(s) | 307 |
| Hpy8I | GTNNAC | 2 cut(s) | 136, 169 |
| HpyAV | CCTTC | 2 cut(s) | 73, 455 |
| HpyCH4III | ACNGT | 2 cut(s) | 215, 320 |
| HpyCH4V | TGCA | 4 cut(s) | 85, 242, 528, 544 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 248, 495, 504 |
| Hsp92II | CATG | 3 cut(s) | 189, 195, 544 |
| Ksp22I | TGATCA | 1 cut(s) | 178 |
| Kzo9I | GATC | 3 cut(s) | 4, 178, 207 |
| LguI | GCTCTTC | 1 cut(s) | 305 |
| LpnPI | CCDG | 5 cut(s) | 114, 141, 344, 381, 424 |
| Lsp1109I | GCAGC | 3 cut(s) | 226, 238, 512 |
| MaeI | CTAG | 2 cut(s) | 420, 432 |
| MalI | GATC | 3 cut(s) | 6, 180, 209 |
| MboI | GATC | 3 cut(s) | 4, 178, 207 |
| MboII | GAAGA | 3 cut(s) | 322, 348, 351 |
| MhlI | GDGCHC | 1 cut(s) | 509 |
| MluCI | AATT | 1 cut(s) | 477 |
| MmeI | TCCRAC | 1 cut(s) | 436 |
| MnlI | CCTC | 7 cut(s) | 12, 15, 61, 133, 265, 408, 546 |
| MroXI | GAANNNNTTC | 1 cut(s) | 443 |
| MslI | CAYNNNNRTG | 2 cut(s) | 108, 190 |
| MspI | CCGG | 2 cut(s) | 331, 411 |
| MspR9I | CCNGG | 3 cut(s) | 129, 411, 412 |
| MvaI | CCWGG | 1 cut(s) | 129 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 248, 495, 504 |
| NciI | CCSGG | 2 cut(s) | 411, 412 |
| NdeII | GATC | 3 cut(s) | 4, 178, 207 |
| NlaIII | CATG | 3 cut(s) | 189, 195, 544 |
| PceI | AGGCCT | 1 cut(s) | 418 |
| PciSI | GCTCTTC | 1 cut(s) | 305 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 487 |
| PdmI | GAANNNNTTC | 1 cut(s) | 443 |
| PfoI | TCCNGGA | 1 cut(s) | 127 |
| PkrI | GCNGC | 5 cut(s) | 241, 253, 497, 527, 546 |
| Psp6I | CCWGG | 1 cut(s) | 127 |
| PspGI | CCWGG | 1 cut(s) | 127 |
| PspPI | GGNCC | 1 cut(s) | 42 |
| RsaI | GTAC | 1 cut(s) | 287 |
| RsaNI | GTAC | 1 cut(s) | 286 |
| RseI | CAYNNNNRTG | 2 cut(s) | 108, 190 |
| SapI | GCTCTTC | 1 cut(s) | 305 |
| SatI | GCNGC | 5 cut(s) | 240, 252, 496, 526, 545 |
| Sau3AI | GATC | 3 cut(s) | 4, 178, 207 |
| Sau96I | GGNCC | 1 cut(s) | 42 |
| ScaI | AGTACT | 1 cut(s) | 287 |
| ScrFI | CCNGG | 3 cut(s) | 129, 411, 412 |
| SduI | GDGCHC | 1 cut(s) | 509 |
| SfcI | CTRYAG | 1 cut(s) | 316 |
| SinI | GGWCC | 1 cut(s) | 42 |
| SmaI | CCCGGG | 1 cut(s) | 412 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 108, 190 |
| Sse9I | AATT | 1 cut(s) | 477 |
| SseBI | AGGCCT | 1 cut(s) | 418 |
| SsiI | CCGC | 2 cut(s) | 442, 495 |
| SspMI | CTAG | 2 cut(s) | 420, 432 |
| StuI | AGGCCT | 1 cut(s) | 418 |
| StyD4I | CCNGG | 3 cut(s) | 127, 409, 410 |
| StyI | CCWWGG | 2 cut(s) | 419, 431 |
| TaaI | ACNGT | 2 cut(s) | 215, 320 |
| TaqI | TCGA | 1 cut(s) | 145 |
| TasI | AATT | 1 cut(s) | 477 |
| TatI | WGTACW | 1 cut(s) | 285 |
| TauI | GCSGC | 1 cut(s) | 498 |
| TscAI | CASTG | 1 cut(s) | 115 |
| TseI | GCWGC | 4 cut(s) | 239, 251, 525, 544 |
| TspDTI | ATGAA | 3 cut(s) | 42, 174, 180 |
| TspMI | CCCGGG | 1 cut(s) | 410 |
| TspRI | CASTG | 1 cut(s) | 115 |
| VpaK11BI | GGWCC | 1 cut(s) | 42 |
| XmaI | CCCGGG | 1 cut(s) | 410 |
| XmaJI | CCTAGG | 2 cut(s) | 419, 431 |
| XmnI | GAANNNNTTC | 1 cut(s) | 443 |
| XspI | CTAG | 2 cut(s) | 420, 432 |
| ZrmI | AGTACT | 1 cut(s) | 287 |