MuDR family transposase
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 2 cut(s) | 93, 864 |
| AccI | GTMKAC | 1 cut(s) | 485 |
| AciI | CCGC | 2 cut(s) | 59, 326 |
| AclWI | GGATC | 1 cut(s) | 809 |
| AcoI | YGGCCR | 1 cut(s) | 859 |
| AcsI | RAATTY | 1 cut(s) | 167 |
| AdeI | CACNNNGTG | 2 cut(s) | 846, 848 |
| AfaI | GTAC | 2 cut(s) | 511, 562 |
| AgsI | TTSAA | 8 cut(s) | 97, 151, 295, 344, 392, 503, 605, 647 |
| AluBI | AGCT | 3 cut(s) | 17, 427, 749 |
| AluI | AGCT | 3 cut(s) | 17, 427, 749 |
| Alw21I | GWGCWC | 1 cut(s) | 682 |
| AlwI | GGATC | 1 cut(s) | 809 |
| AoxI | GGCC | 1 cut(s) | 859 |
| ApeKI | GCWGC | 3 cut(s) | 122, 328, 754 |
| ApoI | RAATTY | 1 cut(s) | 167 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 348 |
| AspLEI | GCGC | 1 cut(s) | 58 |
| AsuHPI | GGTGA | 2 cut(s) | 544, 752 |
| BalI | TGGCCA | 1 cut(s) | 861 |
| BbsI | GAAGAC | 2 cut(s) | 665, 790 |
| Bbv12I | GWGCWC | 1 cut(s) | 682 |
| BbvI | GCAGC | 3 cut(s) | 109, 315, 766 |
| BccI | CCATC | 1 cut(s) | 23 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 212, 246 |
| BciVI | GTATCC | 2 cut(s) | 117, 638 |
| BclI | TGATCA | 1 cut(s) | 850 |
| BfaI | CTAG | 2 cut(s) | 132, 729 |
| BfmI | CTRYAG | 1 cut(s) | 670 |
| BfuAI | ACCTGC | 2 cut(s) | 93, 864 |
| BfuI | GTATCC | 2 cut(s) | 117, 638 |
| BglII | AGATCT | 1 cut(s) | 709 |
| BisI | GCNGC | 5 cut(s) | 59, 123, 326, 329, 755 |
| BlsI | GCNGC | 5 cut(s) | 60, 124, 327, 330, 756 |
| BmsI | GCATC | 2 cut(s) | 88, 308 |
| BpiI | GAAGAC | 2 cut(s) | 665, 790 |
| Bpu10I | CCTNAGC | 1 cut(s) | 423 |
| BpuEI | CTTGAG | 1 cut(s) | 449 |
| BsaJI | CCNNGG | 2 cut(s) | 10, 788 |
| Bse1I | ACTGG | 4 cut(s) | 481, 659, 701, 830 |
| Bse3DI | GCAATG | 1 cut(s) | 889 |
| BseDI | CCNNGG | 2 cut(s) | 10, 788 |
| BseGI | GGATG | 3 cut(s) | 34, 316, 665 |
| BseMI | GCAATG | 1 cut(s) | 889 |
| BseMII | CTCAG | 1 cut(s) | 347 |
| BseNI | ACTGG | 4 cut(s) | 481, 659, 701, 830 |
| BseRI | GAGGAG | 1 cut(s) | 421 |
| BseXI | GCAGC | 3 cut(s) | 109, 315, 766 |
| BshFI | GGCC | 1 cut(s) | 861 |
| BsiHKAI | GWGCWC | 1 cut(s) | 682 |
| BslFI | GGGAC | 1 cut(s) | 689 |
| BsmFI | GGGAC | 1 cut(s) | 689 |
| BsmI | GAATGC | 1 cut(s) | 348 |
| BsnI | GGCC | 1 cut(s) | 861 |
| Bsp1286I | GDGCHC | 1 cut(s) | 682 |
| Bsp1407I | TGTACA | 1 cut(s) | 509 |
| Bsp143I | GATC | 5 cut(s) | 685, 709, 801, 850, 891 |
| Bsp19I | CCATGG | 1 cut(s) | 10 |
| BspACI | CCGC | 2 cut(s) | 59, 326 |
| BspANI | GGCC | 1 cut(s) | 861 |
| BspCNI | CTCAG | 1 cut(s) | 346 |
| BspHI | TCATGA | 1 cut(s) | 682 |
| BspMI | ACCTGC | 2 cut(s) | 93, 864 |
| BspPI | GGATC | 1 cut(s) | 809 |
| BsrDI | GCAATG | 1 cut(s) | 889 |
| BsrGI | TGTACA | 1 cut(s) | 509 |
| BsrI | ACTGG | 4 cut(s) | 481, 659, 701, 830 |
| BssECI | CCNNGG | 2 cut(s) | 10, 788 |
| BssMI | GATC | 5 cut(s) | 685, 709, 801, 850, 891 |
| BssT1I | CCWWGG | 1 cut(s) | 10 |
| Bst4CI | ACNGT | 5 cut(s) | 71, 526, 626, 638, 846 |
| Bst6I | CTCTTC | 1 cut(s) | 813 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 879 |
| BstAUI | TGTACA | 1 cut(s) | 509 |
| BstC8I | GCNNGC | 2 cut(s) | 241, 323 |
| BstDEI | CTNAG | 2 cut(s) | 333, 423 |
| BstDSI | CCRYGG | 2 cut(s) | 10, 788 |
| BstF5I | GGATG | 3 cut(s) | 34, 316, 665 |
| BstHHI | GCGC | 1 cut(s) | 58 |
| BstKTI | GATC | 5 cut(s) | 688, 712, 804, 853, 894 |
| BstMBI | GATC | 5 cut(s) | 685, 709, 801, 850, 891 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 128, 337, 879 |
| BstSFI | CTRYAG | 1 cut(s) | 670 |
| BstV1I | GCAGC | 3 cut(s) | 109, 315, 766 |
| BstV2I | GAAGAC | 2 cut(s) | 665, 790 |
| BstX2I | RGATCY | 1 cut(s) | 709 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 17 |
| BstYI | RGATCY | 1 cut(s) | 709 |
| BsuI | GTATCC | 2 cut(s) | 117, 638 |
| BsuRI | GGCC | 1 cut(s) | 861 |
| BtgI | CCRYGG | 2 cut(s) | 10, 788 |
| BtsCI | GGATG | 3 cut(s) | 34, 316, 665 |
| BtsIMutI | CAGTG | 2 cut(s) | 837, 851 |
| BveI | ACCTGC | 2 cut(s) | 93, 864 |
| Cac8I | GCNNGC | 2 cut(s) | 241, 323 |
| CciI | TCATGA | 1 cut(s) | 682 |
| CfoI | GCGC | 1 cut(s) | 58 |
| Csp6I | GTAC | 2 cut(s) | 510, 561 |
| CviAII | CATG | 6 cut(s) | 11, 301, 529, 588, 683, 879 |
| CviJI | RGCY | 7 cut(s) | 17, 427, 480, 721, 749, 757, 861 |
| CviKI_1 | RGCY | 7 cut(s) | 17, 427, 480, 721, 749, 757, 861 |
| CviQI | GTAC | 2 cut(s) | 510, 561 |
| DdeI | CTNAG | 2 cut(s) | 333, 423 |
| DpnI | GATC | 5 cut(s) | 687, 711, 803, 852, 893 |
| DpnII | GATC | 5 cut(s) | 685, 709, 801, 850, 891 |
| DraIII | CACNNNGTG | 2 cut(s) | 846, 848 |
| EaeI | YGGCCR | 1 cut(s) | 859 |
| Eam1104I | CTCTTC | 1 cut(s) | 813 |
| EarI | CTCTTC | 1 cut(s) | 813 |
| Eco130I | CCWWGG | 1 cut(s) | 10 |
| Eco32I | GATATC | 1 cut(s) | 145 |
| EcoRV | GATATC | 1 cut(s) | 145 |
| EcoT14I | CCWWGG | 1 cut(s) | 10 |
| ErhI | CCWWGG | 1 cut(s) | 10 |
| FaeI | CATG | 6 cut(s) | 14, 304, 532, 591, 686, 882 |
| FaqI | GGGAC | 1 cut(s) | 689 |
| FatI | CATG | 6 cut(s) | 10, 300, 528, 587, 682, 878 |
| FauNDI | CATATG | 1 cut(s) | 127 |
| FbaI | TGATCA | 1 cut(s) | 850 |
| FblI | GTMKAC | 1 cut(s) | 485 |
| Fnu4HI | GCNGC | 5 cut(s) | 59, 123, 326, 329, 755 |
| FokI | GGATG | 3 cut(s) | 41, 323, 652 |
| Fsp4HI | GCNGC | 5 cut(s) | 59, 123, 326, 329, 755 |
| FspBI | CTAG | 2 cut(s) | 132, 729 |
| GlaI | GCGC | 1 cut(s) | 57 |
| GluI | GCNGC | 5 cut(s) | 59, 123, 326, 329, 755 |
| HaeIII | GGCC | 1 cut(s) | 861 |
| HhaI | GCGC | 1 cut(s) | 58 |
| Hin1II | CATG | 6 cut(s) | 14, 304, 532, 591, 686, 882 |
| Hin6I | GCGC | 1 cut(s) | 56 |
| HinP1I | GCGC | 1 cut(s) | 56 |
| HindIII | AAGCTT | 1 cut(s) | 425 |
| HinfI | GANTC | 3 cut(s) | 743, 766, 821 |
| HphI | GGTGA | 2 cut(s) | 544, 752 |
| Hpy166II | GTNNAC | 2 cut(s) | 486, 535 |
| Hpy188I | TCNGA | 1 cut(s) | 782 |
| Hpy188III | TCNNGA | 3 cut(s) | 683, 713, 825 |
| Hpy8I | GTNNAC | 2 cut(s) | 486, 535 |
| HpyAV | CCTTC | 4 cut(s) | 338, 374, 379, 610 |
| HpyCH4III | ACNGT | 5 cut(s) | 71, 526, 626, 638, 846 |
| HpyCH4V | TGCA | 7 cut(s) | 125, 321, 599, 613, 754, 840, 882 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 128, 337, 879 |
| HpyF3I | CTNAG | 2 cut(s) | 333, 423 |
| Hsp92II | CATG | 6 cut(s) | 14, 304, 532, 591, 686, 882 |
| HspAI | GCGC | 1 cut(s) | 56 |
| Ksp22I | TGATCA | 1 cut(s) | 850 |
| Kzo9I | GATC | 5 cut(s) | 685, 709, 801, 850, 891 |
| LmnI | GCTCC | 1 cut(s) | 14 |
| Lsp1109I | GCAGC | 3 cut(s) | 109, 315, 766 |
| LweI | GCATC | 2 cut(s) | 88, 308 |
| MaeI | CTAG | 2 cut(s) | 132, 729 |
| MaeIII | GTNAC | 1 cut(s) | 638 |
| MalI | GATC | 5 cut(s) | 687, 711, 803, 852, 893 |
| MboI | GATC | 5 cut(s) | 685, 709, 801, 850, 891 |
| MboII | GAAGA | 8 cut(s) | 139, 176, 387, 659, 670, 680, 795, 830 |
| MflI | RGATCY | 1 cut(s) | 709 |
| MhlI | GDGCHC | 1 cut(s) | 682 |
| MlsI | TGGCCA | 1 cut(s) | 861 |
| MluCI | AATT | 4 cut(s) | 91, 167, 274, 466 |
| MluNI | TGGCCA | 1 cut(s) | 861 |
| MlyI | GAGTC | 2 cut(s) | 760, 830 |
| MmeI | TCCRAC | 1 cut(s) | 141 |
| MnlI | CCTC | 8 cut(s) | 342, 399, 508, 540, 673, 768, 786, 792 |
| Mox20I | TGGCCA | 1 cut(s) | 861 |
| MroXI | GAANNNNTTC | 1 cut(s) | 348 |
| MscI | TGGCCA | 1 cut(s) | 861 |
| MslI | CAYNNNNRTG | 2 cut(s) | 353, 527 |
| Msp20I | TGGCCA | 1 cut(s) | 861 |
| MspA1I | CMGCKG | 1 cut(s) | 328 |
| Mva1269I | GAATGC | 1 cut(s) | 348 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 128, 337, 879 |
| NcoI | CCATGG | 1 cut(s) | 10 |
| NdeI | CATATG | 1 cut(s) | 127 |
| NdeII | GATC | 5 cut(s) | 685, 709, 801, 850, 891 |
| NlaIII | CATG | 6 cut(s) | 14, 304, 532, 591, 686, 882 |
| PagI | TCATGA | 1 cut(s) | 682 |
| PctI | GAATGC | 1 cut(s) | 348 |
| PdmI | GAANNNNTTC | 1 cut(s) | 348 |
| PfeI | GAWTC | 1 cut(s) | 743 |
| PkrI | GCNGC | 5 cut(s) | 60, 124, 327, 330, 756 |
| PleI | GAGTC | 2 cut(s) | 760, 829 |
| PpsI | GAGTC | 2 cut(s) | 760, 829 |
| PsuI | RGATCY | 1 cut(s) | 709 |
| RsaI | GTAC | 2 cut(s) | 511, 562 |
| RsaNI | GTAC | 2 cut(s) | 510, 561 |
| RseI | CAYNNNNRTG | 2 cut(s) | 353, 527 |
| SatI | GCNGC | 5 cut(s) | 59, 123, 326, 329, 755 |
| Sau3AI | GATC | 5 cut(s) | 685, 709, 801, 850, 891 |
| SchI | GAGTC | 2 cut(s) | 760, 830 |
| SduI | GDGCHC | 1 cut(s) | 682 |
| SfaNI | GCATC | 2 cut(s) | 88, 308 |
| SfcI | CTRYAG | 1 cut(s) | 670 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 353, 527 |
| SmlI | CTYRAG | 1 cut(s) | 428 |
| SmoI | CTYRAG | 1 cut(s) | 428 |
| Sse9I | AATT | 4 cut(s) | 91, 167, 274, 466 |
| SsiI | CCGC | 2 cut(s) | 59, 326 |
| SspMI | CTAG | 2 cut(s) | 132, 729 |
| StyI | CCWWGG | 1 cut(s) | 10 |
| TaaI | ACNGT | 5 cut(s) | 71, 526, 626, 638, 846 |
| TaqI | TCGA | 2 cut(s) | 443, 769 |
| TasI | AATT | 4 cut(s) | 91, 167, 274, 466 |
| TatI | WGTACW | 2 cut(s) | 509, 560 |
| TauI | GCSGC | 2 cut(s) | 61, 328 |
| TfiI | GAWTC | 1 cut(s) | 743 |
| TscAI | CASTG | 2 cut(s) | 837, 851 |
| TseI | GCWGC | 3 cut(s) | 122, 328, 754 |
| TspDTI | ATGAA | 1 cut(s) | 168 |
| TspGWI | ACGGA | 1 cut(s) | 805 |
| TspRI | CASTG | 2 cut(s) | 837, 851 |
| XapI | RAATTY | 1 cut(s) | 167 |
| XmiI | GTMKAC | 1 cut(s) | 485 |
| XmnI | GAANNNNTTC | 1 cut(s) | 348 |
| XspI | CTAG | 2 cut(s) | 132, 729 |