isoform X1
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| MULE | PF10551 | 361 - 455 | 5.7e-09 | MULE transposase domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1596 |
| Acc36I | ACCTGC | 1 cut(s) | 2189 |
| AccB1I | GGYRCC | 2 cut(s) | 512, 1533 |
| AccBSI | CCGCTC | 1 cut(s) | 1392 |
| AccI | GTMKAC | 1 cut(s) | 1072 |
| AciI | CCGC | 1 cut(s) | 1392 |
| AclI | AACGTT | 1 cut(s) | 349 |
| AclWI | GGATC | 2 cut(s) | 1561, 1743 |
| AcoI | YGGCCR | 3 cut(s) | 1173, 1359, 2143 |
| AcsI | RAATTY | 2 cut(s) | 521, 597 |
| AcuI | CTGAAG | 3 cut(s) | 1221, 1529, 1632 |
| AcvI | CACGTG | 1 cut(s) | 1857 |
| AfaI | GTAC | 4 cut(s) | 575, 705, 1317, 1396 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 69, 72, 948, 1634, 2082 |
| AflIII | ACRYGT | 3 cut(s) | 933, 1854, 1856 |
| AjnI | CCWGG | 6 cut(s) | 235, 941, 973, 1321, 1601, 2077 |
| AleI | CACNNNNGTG | 1 cut(s) | 569 |
| AluBI | AGCT | 9 cut(s) | 220, 387, 535, 792, 956, 1468, 1697, 1916, 2131 |
| AluI | AGCT | 9 cut(s) | 220, 387, 535, 792, 956, 1468, 1697, 1916, 2131 |
| Alw26I | GTCTC | 3 cut(s) | 1190, 1924, 2111 |
| AlwI | GGATC | 2 cut(s) | 1561, 1743 |
| AoxI | GGCC | 5 cut(s) | 1173, 1359, 2073, 2084, 2143 |
| ApaI | GGGCCC | 1 cut(s) | 2077 |
| ApeKI | GCWGC | 4 cut(s) | 354, 535, 612, 1904 |
| ApoI | RAATTY | 2 cut(s) | 521, 597 |
| AseI | ATTAAT | 1 cut(s) | 1271 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 189, 1881 |
| AspS9I | GGNCC | 5 cut(s) | 60, 1122, 1707, 2073, 2074 |
| AsuHPI | GGTGA | 3 cut(s) | 556, 1493, 1691 |
| AvaII | GGWCC | 3 cut(s) | 60, 1122, 1707 |
| BaeGI | GKGCMC | 1 cut(s) | 2077 |
| BalI | TGGCCA | 1 cut(s) | 1175 |
| BanI | GGYRCC | 2 cut(s) | 512, 1533 |
| BanII | GRGCYC | 1 cut(s) | 2077 |
| BbrPI | CACGTG | 1 cut(s) | 1857 |
| BbvI | GCAGC | 4 cut(s) | 366, 522, 624, 1891 |
| BccI | CCATC | 4 cut(s) | 80, 665, 1133, 1669 |
| BceAI | ACGGC | 1 cut(s) | 1521 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 485, 519 |
| BciT130I | CCWGG | 6 cut(s) | 237, 943, 975, 1323, 1603, 2079 |
| BclI | TGATCA | 1 cut(s) | 1645 |
| BcoDI | GTCTC | 3 cut(s) | 1190, 1924, 2111 |
| BfaI | CTAG | 3 cut(s) | 12, 894, 1653 |
| BfuAI | ACCTGC | 1 cut(s) | 2189 |
| BisI | GCNGC | 4 cut(s) | 355, 536, 613, 1905 |
| BlsI | GCNGC | 4 cut(s) | 356, 537, 614, 1906 |
| Bme1390I | CCNGG | 6 cut(s) | 237, 943, 975, 1323, 1603, 2079 |
| Bme18I | GGWCC | 3 cut(s) | 60, 1122, 1707 |
| BmgT120I | GGNCC | 5 cut(s) | 60, 1122, 1707, 2073, 2074 |
| BmiI | GGNNCC | 6 cut(s) | 514, 625, 1123, 1535, 2075, 2076 |
| BmrFI | CCNGG | 6 cut(s) | 237, 943, 975, 1323, 1603, 2079 |
| BmsI | GCATC | 6 cut(s) | 822, 1009, 1439, 1474, 1614, 1747 |
| BsaAI | YACGTR | 1 cut(s) | 1857 |
| BsaJI | CCNNGG | 6 cut(s) | 812, 973, 1252, 1549, 1837, 2077 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 69, 72, 948, 1634, 2082 |
| Bse118I | RCCGGY | 2 cut(s) | 1627, 2145 |
| Bse1I | ACTGG | 1 cut(s) | 1153 |
| BseBI | CCWGG | 6 cut(s) | 237, 943, 975, 1323, 1603, 2079 |
| BseDI | CCNNGG | 6 cut(s) | 812, 973, 1252, 1549, 1837, 2077 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 69, 72, 948, 1634, 2082 |
| BseMII | CTCAG | 4 cut(s) | 414, 429, 906, 1185 |
| BseNI | ACTGG | 1 cut(s) | 1153 |
| BseSI | GKGCMC | 1 cut(s) | 2077 |
| BseXI | GCAGC | 4 cut(s) | 366, 522, 624, 1891 |
| BsgI | GTGCAG | 1 cut(s) | 2167 |
| BshFI | GGCC | 5 cut(s) | 1175, 1361, 2075, 2086, 2145 |
| BshNI | GGYRCC | 2 cut(s) | 512, 1533 |
| BsiSI | CCGG | 3 cut(s) | 1225, 1628, 2146 |
| BslFI | GGGAC | 1 cut(s) | 1135 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 69, 72, 948, 1634, 2082 |
| BsmAI | GTCTC | 3 cut(s) | 1190, 1924, 2111 |
| BsmFI | GGGAC | 1 cut(s) | 1135 |
| BsmI | GAATGC | 1 cut(s) | 774 |
| BsnI | GGCC | 5 cut(s) | 1175, 1361, 2075, 2086, 2145 |
| Bsp120I | GGGCCC | 1 cut(s) | 2073 |
| Bsp1286I | GDGCHC | 1 cut(s) | 2077 |
| Bsp1407I | TGTACA | 1 cut(s) | 573 |
| Bsp143I | GATC | 6 cut(s) | 5, 1279, 1553, 1645, 1735, 1945 |
| BspACI | CCGC | 1 cut(s) | 1392 |
| BspANI | GGCC | 5 cut(s) | 1175, 1361, 2075, 2086, 2145 |
| BspCNI | CTCAG | 4 cut(s) | 415, 430, 907, 1186 |
| BspLI | GGNNCC | 6 cut(s) | 514, 625, 1123, 1535, 2075, 2076 |
| BspMI | ACCTGC | 1 cut(s) | 2189 |
| BspPI | GGATC | 2 cut(s) | 1561, 1743 |
| BspQI | GCTCTTC | 1 cut(s) | 1608 |
| BspT107I | GGYRCC | 2 cut(s) | 512, 1533 |
| BsrBI | CCGCTC | 1 cut(s) | 1392 |
| BsrFI | RCCGGY | 2 cut(s) | 1627, 2145 |
| BsrGI | TGTACA | 1 cut(s) | 573 |
| BsrI | ACTGG | 1 cut(s) | 1153 |
| BssAI | RCCGGY | 2 cut(s) | 1627, 2145 |
| BssECI | CCNNGG | 6 cut(s) | 812, 973, 1252, 1549, 1837, 2077 |
| BssMI | GATC | 6 cut(s) | 5, 1279, 1553, 1645, 1735, 1945 |
| BssT1I | CCWWGG | 3 cut(s) | 812, 1252, 1837 |
| Bst2UI | CCWGG | 6 cut(s) | 237, 943, 975, 1323, 1603, 2079 |
| Bst4CI | ACNGT | 2 cut(s) | 1451, 1770 |
| Bst6I | CTCTTC | 3 cut(s) | 1608, 1679, 2063 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1977 |
| BstAUI | TGTACA | 1 cut(s) | 573 |
| BstBAI | YACGTR | 1 cut(s) | 1857 |
| BstC8I | GCNNGC | 1 cut(s) | 1629 |
| BstDEI | CTNAG | 6 cut(s) | 297, 423, 438, 915, 1194, 1469 |
| BstDSI | CCRYGG | 1 cut(s) | 1549 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 946 |
| BstKTI | GATC | 6 cut(s) | 8, 1282, 1556, 1648, 1738, 1948 |
| BstMAI | GTCTC | 3 cut(s) | 1190, 1924, 2111 |
| BstMBI | GATC | 6 cut(s) | 5, 1279, 1553, 1645, 1735, 1945 |
| BstNI | CCWGG | 6 cut(s) | 237, 943, 975, 1323, 1603, 2079 |
| BstNSI | RCATGY | 5 cut(s) | 647, 743, 937, 1047, 1351 |
| BstSCI | CCNGG | 6 cut(s) | 235, 941, 973, 1321, 1601, 2077 |
| BstSLI | GKGCMC | 1 cut(s) | 2077 |
| BstV1I | GCAGC | 4 cut(s) | 366, 522, 624, 1891 |
| BsuRI | GGCC | 5 cut(s) | 1175, 1361, 2075, 2086, 2145 |
| BtgI | CCRYGG | 1 cut(s) | 1549 |
| BtsIMutI | CAGTG | 1 cut(s) | 2184 |
| BveI | ACCTGC | 1 cut(s) | 2189 |
| Cac8I | GCNNGC | 1 cut(s) | 1629 |
| Cfr10I | RCCGGY | 2 cut(s) | 1627, 2145 |
| Cfr13I | GGNCC | 5 cut(s) | 60, 1122, 1707, 2073, 2074 |
| Csp6I | GTAC | 4 cut(s) | 574, 704, 1316, 1395 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 2092, 2127 |
| CviQI | GTAC | 4 cut(s) | 574, 704, 1316, 1395 |
| DdeI | CTNAG | 6 cut(s) | 297, 423, 438, 915, 1194, 1469 |
| DpnI | GATC | 6 cut(s) | 7, 1281, 1555, 1647, 1737, 1947 |
| DpnII | GATC | 6 cut(s) | 5, 1279, 1553, 1645, 1735, 1945 |
| EaeI | YGGCCR | 3 cut(s) | 1173, 1359, 2143 |
| Eam1104I | CTCTTC | 3 cut(s) | 1608, 1679, 2063 |
| EarI | CTCTTC | 3 cut(s) | 1608, 1679, 2063 |
| Eco130I | CCWWGG | 3 cut(s) | 812, 1252, 1837 |
| Eco24I | GRGCYC | 1 cut(s) | 2077 |
| Eco32I | GATATC | 2 cut(s) | 820, 858 |
| Eco47I | GGWCC | 3 cut(s) | 60, 1122, 1707 |
| Eco57I | CTGAAG | 3 cut(s) | 1221, 1529, 1632 |
| Eco72I | CACGTG | 1 cut(s) | 1857 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 946 |
| EcoO109I | RGGNCCY | 3 cut(s) | 60, 2073, 2074 |
| EcoRI | GAATTC | 1 cut(s) | 597 |
| EcoRII | CCWGG | 6 cut(s) | 235, 941, 973, 1321, 1601, 2077 |
| EcoRV | GATATC | 2 cut(s) | 820, 858 |
| EcoT14I | CCWWGG | 3 cut(s) | 812, 1252, 1837 |
| EcoT22I | ATGCAT | 3 cut(s) | 1353, 1432, 1939 |
| EcoT38I | GRGCYC | 1 cut(s) | 2077 |
| ErhI | CCWWGG | 3 cut(s) | 812, 1252, 1837 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 440, 472, 708, 740 |
| FaqI | GGGAC | 1 cut(s) | 1135 |
| FauNDI | CATATG | 2 cut(s) | 1426, 1633 |
| FbaI | TGATCA | 1 cut(s) | 1645 |
| FblI | GTMKAC | 1 cut(s) | 1072 |
| Fnu4HI | GCNGC | 4 cut(s) | 355, 536, 613, 1905 |
| FriOI | GRGCYC | 1 cut(s) | 2077 |
| Fsp4HI | GCNGC | 4 cut(s) | 355, 536, 613, 1905 |
| FspBI | CTAG | 3 cut(s) | 12, 894, 1653 |
| GluI | GCNGC | 4 cut(s) | 355, 536, 613, 1905 |
| HaeIII | GGCC | 5 cut(s) | 1175, 1361, 2075, 2086, 2145 |
| HapII | CCGG | 3 cut(s) | 1225, 1628, 2146 |
| HincII | GTYRAC | 1 cut(s) | 1834 |
| HindII | GTYRAC | 1 cut(s) | 1834 |
| HindIII | AAGCTT | 1 cut(s) | 1466 |
| HpaII | CCGG | 3 cut(s) | 1225, 1628, 2146 |
| HphI | GGTGA | 3 cut(s) | 556, 1493, 1691 |
| Hpy166II | GTNNAC | 7 cut(s) | 347, 574, 576, 706, 1073, 1783, 1834 |
| Hpy188I | TCNGA | 9 cut(s) | 46, 439, 520, 661, 916, 1195, 1509, 1650, 1674 |
| Hpy188III | TCNNGA | 9 cut(s) | 117, 462, 527, 766, 779, 823, 1004, 1523, 1705 |
| Hpy8I | GTNNAC | 7 cut(s) | 347, 574, 576, 706, 1073, 1783, 1834 |
| HpyAV | CCTTC | 6 cut(s) | 51, 485, 1049, 1228, 1504, 2076 |
| HpyCH4III | ACNGT | 2 cut(s) | 1451, 1770 |
| HpyCH4IV | ACGT | 5 cut(s) | 349, 702, 1558, 1750, 1856 |
| HpyF3I | CTNAG | 6 cut(s) | 297, 423, 438, 915, 1194, 1469 |
| HpySE526I | ACGT | 5 cut(s) | 349, 702, 1558, 1750, 1856 |
| KroI | GCCGGC | 1 cut(s) | 1627 |
| KroNI | GCCGGC | 1 cut(s) | 1629 |
| Ksp22I | TGATCA | 1 cut(s) | 1645 |
| Kzo9I | GATC | 6 cut(s) | 5, 1279, 1553, 1645, 1735, 1945 |
| LguI | GCTCTTC | 1 cut(s) | 1608 |
| Lsp1109I | GCAGC | 4 cut(s) | 366, 522, 624, 1891 |
| LweI | GCATC | 6 cut(s) | 822, 1009, 1439, 1474, 1614, 1747 |
| MaeI | CTAG | 3 cut(s) | 12, 894, 1653 |
| MaeII | ACGT | 5 cut(s) | 349, 702, 1558, 1750, 1856 |
| MaeIII | GTNAC | 3 cut(s) | 968, 1264, 1343 |
| MalI | GATC | 6 cut(s) | 7, 1281, 1555, 1647, 1737, 1947 |
| MbiI | CCGCTC | 1 cut(s) | 1392 |
| MboI | GATC | 6 cut(s) | 5, 1279, 1553, 1645, 1735, 1945 |
| MfeI | CAATTG | 1 cut(s) | 549 |
| MhlI | GDGCHC | 1 cut(s) | 2077 |
| MlsI | TGGCCA | 1 cut(s) | 1175 |
| MluNI | TGGCCA | 1 cut(s) | 1175 |
| MlyI | GAGTC | 2 cut(s) | 1117, 2113 |
| Mox20I | TGGCCA | 1 cut(s) | 1175 |
| Mph1103I | ATGCAT | 3 cut(s) | 1353, 1432, 1939 |
| MroNI | GCCGGC | 1 cut(s) | 1627 |
| MroXI | GAANNNNTTC | 2 cut(s) | 189, 1881 |
| MscI | TGGCCA | 1 cut(s) | 1175 |
| MseI | TTAA | 5 cut(s) | 930, 1062, 1271, 1460, 1773 |
| MslI | CAYNNNNRTG | 1 cut(s) | 569 |
| Msp20I | TGGCCA | 1 cut(s) | 1175 |
| MspI | CCGG | 3 cut(s) | 1225, 1628, 2146 |
| MspR9I | CCNGG | 6 cut(s) | 237, 943, 975, 1323, 1603, 2079 |
| MunI | CAATTG | 1 cut(s) | 549 |
| Mva1269I | GAATGC | 1 cut(s) | 774 |
| MvaI | CCWGG | 6 cut(s) | 237, 943, 975, 1323, 1603, 2079 |
| NaeI | GCCGGC | 1 cut(s) | 1629 |
| NdeI | CATATG | 2 cut(s) | 1426, 1633 |
| NdeII | GATC | 6 cut(s) | 5, 1279, 1553, 1645, 1735, 1945 |
| NgoMIV | GCCGGC | 1 cut(s) | 1627 |
| NlaIV | GGNNCC | 6 cut(s) | 514, 625, 1123, 1535, 2075, 2076 |
| NsiI | ATGCAT | 3 cut(s) | 1353, 1432, 1939 |
| NspI | RCATGY | 5 cut(s) | 647, 743, 937, 1047, 1351 |
| OliI | CACNNNNGTG | 1 cut(s) | 569 |
| PciI | ACATGT | 1 cut(s) | 933 |
| PciSI | GCTCTTC | 1 cut(s) | 1608 |
| PctI | GAATGC | 1 cut(s) | 774 |
| PdiI | GCCGGC | 1 cut(s) | 1629 |
| PdmI | GAANNNNTTC | 2 cut(s) | 189, 1881 |
| PkrI | GCNGC | 4 cut(s) | 356, 537, 614, 1906 |
| PleI | GAGTC | 2 cut(s) | 1116, 2113 |
| PmaCI | CACGTG | 1 cut(s) | 1857 |
| PmlI | CACGTG | 1 cut(s) | 1857 |
| PpsI | GAGTC | 2 cut(s) | 1116, 2113 |
| Ppu21I | YACGTR | 1 cut(s) | 1857 |
| PpuMI | RGGWCCY | 1 cut(s) | 60 |
| PscI | ACATGT | 1 cut(s) | 933 |
| PshBI | ATTAAT | 1 cut(s) | 1271 |
| PsiI | TTATAA | 1 cut(s) | 1596 |
| Psp1406I | AACGTT | 1 cut(s) | 349 |
| Psp5II | RGGWCCY | 1 cut(s) | 60 |
| Psp6I | CCWGG | 6 cut(s) | 235, 941, 973, 1321, 1601, 2077 |
| PspCI | CACGTG | 1 cut(s) | 1857 |
| PspGI | CCWGG | 6 cut(s) | 235, 941, 973, 1321, 1601, 2077 |
| PspN4I | GGNNCC | 6 cut(s) | 514, 625, 1123, 1535, 2075, 2076 |
| PspOMI | GGGCCC | 1 cut(s) | 2073 |
| PspPI | GGNCC | 5 cut(s) | 60, 1122, 1707, 2073, 2074 |
| PspPPI | RGGWCCY | 1 cut(s) | 60 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 146, 178 |
| RsaI | GTAC | 4 cut(s) | 575, 705, 1317, 1396 |
| RsaNI | GTAC | 4 cut(s) | 574, 704, 1316, 1395 |
| RseI | CAYNNNNRTG | 1 cut(s) | 569 |
| SapI | GCTCTTC | 1 cut(s) | 1608 |
| SaqAI | TTAA | 5 cut(s) | 930, 1062, 1271, 1460, 1773 |
| SatI | GCNGC | 4 cut(s) | 355, 536, 613, 1905 |
| Sau3AI | GATC | 6 cut(s) | 5, 1279, 1553, 1645, 1735, 1945 |
| Sau96I | GGNCC | 5 cut(s) | 60, 1122, 1707, 2073, 2074 |
| SchI | GAGTC | 2 cut(s) | 1117, 2113 |
| ScrFI | CCNGG | 6 cut(s) | 237, 943, 975, 1323, 1603, 2079 |
| SduI | GDGCHC | 1 cut(s) | 2077 |
| SfaNI | GCATC | 6 cut(s) | 822, 1009, 1439, 1474, 1614, 1747 |
| SinI | GGWCC | 3 cut(s) | 60, 1122, 1707 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 569 |
| SsiI | CCGC | 1 cut(s) | 1392 |
| SspMI | CTAG | 3 cut(s) | 12, 894, 1653 |
| StyD4I | CCNGG | 6 cut(s) | 235, 941, 973, 1321, 1601, 2077 |
| StyI | CCWWGG | 3 cut(s) | 812, 1252, 1837 |
| TaaI | ACNGT | 2 cut(s) | 1451, 1770 |
| TaiI | ACGT | 5 cut(s) | 352, 705, 1561, 1753, 1859 |
| TaqI | TCGA | 5 cut(s) | 171, 526, 745, 1787, 1810 |
| TatI | WGTACW | 1 cut(s) | 573 |
| Tru1I | TTAA | 5 cut(s) | 930, 1062, 1271, 1460, 1773 |
| Tru9I | TTAA | 5 cut(s) | 930, 1062, 1271, 1460, 1773 |
| TscAI | CASTG | 1 cut(s) | 2191 |
| TseI | GCWGC | 4 cut(s) | 354, 535, 612, 1904 |
| TspGWI | ACGGA | 1 cut(s) | 1538 |
| TspRI | CASTG | 1 cut(s) | 2191 |
| VpaK11BI | GGWCC | 3 cut(s) | 60, 1122, 1707 |
| VspI | ATTAAT | 1 cut(s) | 1271 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 946 |
| XapI | RAATTY | 2 cut(s) | 521, 597 |
| XceI | RCATGY | 5 cut(s) | 647, 743, 937, 1047, 1351 |
| XmiI | GTMKAC | 1 cut(s) | 1072 |
| XmnI | GAANNNNTTC | 2 cut(s) | 189, 1881 |
| XspI | CTAG | 3 cut(s) | 12, 894, 1653 |
| Zsp2I | ATGCAT | 3 cut(s) | 1353, 1432, 1939 |